MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100156 bp
Accession: NZ_CP075062 Location: 739906..840061 Organism: Escherichia coli strain EC_J_9 Replicon: chromosome
Accession: NZ_CP075062 Location: 739906..840061 Organism: Escherichia coli strain EC_J_9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4F96_RS03575 (735213) | 735213..735971 | + | 759 | WP_000339512.1 | hypothetical protein | - |
| H4F96_RS03580 (736017) | 736017..737366 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| H4F96_RS03585 (737366) | 737366..738190 | + | 825 | WP_000984976.1 | hypothetical protein | - |
| H4F96_RS03590 (738202) | 738202..738762 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| H4F96_RS03595 (738793) | 738793..739863 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| H4F96_RS03600 (739860) | 739860..740939 | + | 1080 | WP_001300858.1 | LPS export ABC transporter permease LptG | - |
| H4F96_RS03605 (740975) | 740975..742147 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| H4F96_RS03610 (742147) | 742147..742395 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| H4F96_RS03615 (742427) | 742427..743341 | - | 915 | WP_001077197.1 | NAD-dependent epimerase/dehydratase family protein | - |
| H4F96_RS03620 (743338) | 743338..745026 | - | 1689 | WP_063112576.1 | Putative ligase | VF |
| H4F96_RS03625 (745435) | 745435..746577 | + | 1143 | WP_001300526.1 | protein YghO | - |
| H4F96_RS03630 (746584) | 746584..747348 | - | 765 | WP_021553870.1 | transcriptional regulator GlcC | - |
| H4F96_RS03635 (747599) | 747599..749098 | + | 1500 | WP_021553869.1 | glycolate oxidase subunit GlcD | - |
| H4F96_RS03640 (749098) | 749098..750150 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| H4F96_RS03645 (750161) | 750161..751384 | + | 1224 | WP_057697724.1 | glycolate oxidase subunit GlcF | - |
| H4F96_RS03650 (751389) | 751389..751793 | + | 405 | WP_021557205.1 | GlcG family protein | - |
| H4F96_RS03655 (751815) | 751815..753986 | + | 2172 | WP_063112575.1 | malate synthase G | - |
| H4F96_RS03660 (754342) | 754342..756024 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| H4F96_RS03665 (756510) | 756510..761078 | + | 4569 | WP_001748751.1 | hypothetical protein | VF |
| H4F96_RS03670 (761218) | 761218..762027 | + | 810 | WP_001365924.1 | Leader peptidase PppA | VF |
| H4F96_RS03675 (762093) | 762093..762503 | + | 411 | WP_001298744.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| H4F96_RS03680 (762521) | 762521..763480 | + | 960 | WP_000135073.1 | Type II secretion system protein C | VF |
| H4F96_RS03685 (763510) | 763510..765570 | + | 2061 | WP_000498824.1 | Type II secretion system protein D | VF |
| H4F96_RS03690 (765570) | 765570..767063 | + | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| H4F96_RS03695 (767063) | 767063..768286 | + | 1224 | WP_001173448.1 | Type II secretion system protein F | VF |
| H4F96_RS03700 (768303) | 768303..768758 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| H4F96_RS03705 (768762) | 768762..769325 | + | 564 | WP_001115140.1 | Type II secretion system protein H | VF |
| H4F96_RS03710 (769322) | 769322..769693 | + | 372 | WP_000820125.1 | Type II secretion system protein I | VF |
| H4F96_RS03715 (769690) | 769690..770289 | + | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| H4F96_RS03720 (770292) | 770292..771269 | + | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| H4F96_RS03725 (771266) | 771266..772444 | + | 1179 | WP_000094973.1 | Type II secretion system protein L | VF |
| H4F96_RS03730 (772446) | 772446..772982 | + | 537 | WP_000942799.1 | Type II secretion system protein M | VF |
| H4F96_RS03735 (773263) | 773263..774105 | - | 843 | WP_040235333.1 | DUF4942 domain-containing protein | - |
| H4F96_RS03740 (774190) | 774190..774387 | - | 198 | WP_032152719.1 | DUF957 domain-containing protein | - |
| H4F96_RS03745 (774399) | 774399..774887 | - | 489 | WP_001774608.1 | DUF5983 family protein | - |
| H4F96_RS03750 (774884) | 774884..775261 | - | 378 | WP_001774607.1 | TA system toxin CbtA family protein | Toxin Detail |
| H4F96_RS03755 (775351) | 775351..775719 | - | 369 | WP_001774606.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H4F96_RS03760 (775769) | 775769..776413 | - | 645 | WP_001774605.1 | hypothetical protein | - |
| H4F96_RS03765 (776432) | 776432..776653 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| H4F96_RS03770 (776716) | 776716..777192 | - | 477 | WP_001297237.1 | RadC family protein | - |
| H4F96_RS03775 (777208) | 777208..777687 | - | 480 | WP_032152717.1 | antirestriction protein | - |
| H4F96_RS03780 (778026) | 778026..778844 | - | 819 | WP_016238867.1 | DUF932 domain-containing protein | - |
| H4F96_RS03785 (778943) | 778943..779176 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| H4F96_RS03790 (779182) | 779182..779859 | - | 678 | WP_144745839.1 | hypothetical protein | - |
| H4F96_RS03795 (780007) | 780007..780687 | - | 681 | WP_032082725.1 | WYL domain-containing protein | - |
| H4F96_RS03800 (780890) | 780890..781774 | - | 885 | WP_001116802.1 | YfjP family GTPase | - |
| H4F96_RS03805 (781875) | 781875..783098 | + | 1224 | WP_001774716.1 | hypothetical protein | - |
| H4F96_RS03810 (784262) | 784262..784792 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| H4F96_RS03815 (785462) | 785462..786193 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| H4F96_RS03820 (786520) | 786520..788124 | + | 1605 | WP_001083417.1 | YfjI family protein | - |
| H4F96_RS03825 (789663) | 789663..790229 | + | 567 | WP_001126807.1 | inovirus-type Gp2 protein | - |
| H4F96_RS03830 (790476) | 790476..791048 | + | 573 | WP_061363487.1 | hypothetical protein | - |
| H4F96_RS03835 (791117) | 791117..791350 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| H4F96_RS03840 (791597) | 791597..792145 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| H4F96_RS03845 (792164) | 792164..792508 | - | 345 | WP_000166952.1 | ProQ/FinO family protein | - |
| H4F96_RS03850 (792505) | 792505..792678 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| H4F96_RS03855 (793141) | 793141..794226 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| H4F96_RS03860 (794223) | 794223..795857 | + | 1635 | WP_213190785.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| H4F96_RS03865 (795847) | 795847..797847 | + | 2001 | WP_024233517.1 | DNA sulfur modification protein DndD | - |
| H4F96_RS03870 (797847) | 797847..798203 | + | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| H4F96_RS03875 (798262) | 798262..799017 | - | 756 | WP_071992076.1 | DGQHR domain-containing protein | - |
| H4F96_RS03880 (799117) | 799117..799422 | - | 306 | WP_000071509.1 | DNA sulfur modification protein DndB | - |
| H4F96_RS03885 (799423) | 799423..799941 | - | 519 | WP_112044940.1 | accessory gene regulator B family protein | - |
| H4F96_RS03890 (799979) | 799979..805033 | - | 5055 | WP_000114120.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| H4F96_RS03895 (805014) | 805014..806339 | - | 1326 | WP_000283233.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| H4F96_RS03900 (806344) | 806344..807993 | - | 1650 | WP_001274542.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| H4F96_RS25635 (808217) | 808217..808382 | - | 166 | Protein_770 | integrase | - |
| H4F96_RS03905 (808606) | 808606..809346 | + | 741 | WP_001477155.1 | outer membrane beta-barrel protein | - |
| H4F96_RS03910 (809520) | 809520..811019 | + | 1500 | WP_001774678.1 | phosphoethanolamine transferase | - |
| H4F96_RS03915 (811128) | 811128..814643 | - | 3516 | WP_213190786.1 | AAA domain-containing protein | - |
| H4F96_RS03920 (815095) | 815095..816357 | - | 1263 | WP_001218810.1 | Prophage integrase IntA ; Integrase | Integrase |
| H4F96_RS03925 (816821) | 816821..817147 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H4F96_RS03930 (817144) | 817144..817407 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H4F96_RS03935 (817479) | 817479..818345 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| H4F96_RS03940 (818430) | 818430..818627 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| H4F96_RS03945 (818639) | 818639..819130 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| H4F96_RS03950 (819127) | 819127..819504 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| H4F96_RS03955 (819551) | 819551..819925 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H4F96_RS03960 (820005) | 820005..820226 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| H4F96_RS03965 (820295) | 820295..820771 | - | 477 | WP_001186715.1 | RadC family protein | - |
| H4F96_RS03970 (820787) | 820787..821272 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| H4F96_RS03975 (821364) | 821364..822182 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| H4F96_RS03980 (822273) | 822273..822482 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| H4F96_RS03985 (822512) | 822512..823189 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| H4F96_RS03990 (823308) | 823308..824192 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| H4F96_RS03995 (824299) | 824299..825231 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| H4F96_RS04000 (825228) | 825228..826037 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| H4F96_RS04005 (827788) | 827788..828519 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| H4F96_RS25640 (828613) | 828613..828768 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| H4F96_RS25645 (828792) | 828792..829052 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| H4F96_RS25650 (829064) | 829064..829270 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| H4F96_RS04015 (829704) | 829704..831308 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| H4F96_RS04020 (832905) | 832905..833471 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| H4F96_RS04025 (833591) | 833591..833740 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| H4F96_RS04030 (833755) | 833755..834327 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| H4F96_RS04035 (834396) | 834396..834632 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| H4F96_RS04040 (834901) | 834901..835449 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| H4F96_RS04045 (835468) | 835468..835716 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| H4F96_RS04050 (835785) | 835785..835976 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| H4F96_RS25940 (836379) | 836379..837070 | - | 692 | Protein_803 | IS1 family transposase | - |
| H4F96_RS04060 (837130) | 837130..837306 | + | 177 | Protein_804 | transketolase family protein | - |
| H4F96_RS25670 (837495) | 837495..837670 | + | 176 | Protein_805 | transposase | - |
| H4F96_RS04070 (838533) | 838533..839099 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| H4F96_RS04075 (839340) | 839340..840155 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| H4F96_RS04080 (840216) | 840216..841019 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| H4F96_RS04085 (841019) | 841019..841855 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| H4F96_RS04090 (842161) | 842161..842403 | + | 243 | WP_000844627.1 | transposase | - |
| H4F96_RS04095 (842435) | 842435..843085 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H4F96_RS04100 (843191) | 843191..844390 | + | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| H4F96_RS04105 (844357) | 844357..844545 | - | 189 | Protein_813 | IS91 family transposase | - |
| H4F96_RS04110 (844657) | 844657..844962 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|