MGE detailed information
MGE type: Conjugative plasmid MGE length: 93960 bp
Accession: NZ_CP074664 Location: 1..93960 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: plasmid pCFSAN008081
Accession: NZ_CP074664 Location: 1..93960 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: plasmid pCFSAN008081
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG493_RS23550 (BG493_23535) | 1..654 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| BG493_RS23555 (BG493_23540) | 644..790 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| BG493_RS23560 (BG493_23545) | 787..1686 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| BG493_RS23565 (BG493_23550) | 1776..2333 | + | 558 | WP_000725062.1 | Attachment invasion locus protein | VF |
| BG493_RS23570 (BG493_23555) | 2600..3358 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| BG493_RS23575 (BG493_23560) | 3455..3649 | - | 195 | Protein_5 | SdiA-regulated domain-containing protein | - |
| BG493_RS23580 (BG493_23565) | 4536..5417 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| BG493_RS23585 (BG493_23570) | 5398..5475 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| BG493_RS23590 (BG493_23575) | 5725..5991 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| BG493_RS23595 (BG493_23580) | 6102..6668 | - | 567 | Protein_9 | phospholipase D family protein | - |
| BG493_RS23600 (BG493_23585) | 6778..6894 | - | 117 | WP_001526822.1 | hypothetical protein | - |
| BG493_RS23605 (BG493_23590) | 6946..7230 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| BG493_RS23610 (BG493_23595) | 7345..7908 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| BG493_RS23615 (BG493_23600) | 7963..8703 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| BG493_RS23620 (BG493_23605) | 8723..13981 | - | 5259 | WP_000986921.1 | Multifunctional conjugation protein TraI | Relaxase |
| BG493_RS23625 (BG493_23610) | 14063..14290 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| BG493_RS23630 (BG493_23615) | 14290..14688 | + | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BG493_RS23635 (BG493_23620) | 14697..16859 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| BG493_RS23640 (BG493_23625) | 17236..17967 | - | 732 | WP_000782438.1 | conjugal transfer complement resistance protein TraT | - |
| BG493_RS23645 (BG493_23630) | 18003..18497 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| BG493_RS23650 (BG493_23635) | 18513..21335 | - | 2823 | WP_001007086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| BG493_RS23655 (BG493_23640) | 21332..22714 | - | 1383 | WP_001161719.1 | conjugal transfer pilus assembly protein TraH | - |
| BG493_RS23660 (BG493_23645) | 22704..23252 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BG493_RS23665 (BG493_23650) | 23239..23532 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BG493_RS23670 (BG493_23655) | 23746..24495 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BG493_RS23675 (BG493_23660) | 24507..24722 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| BG493_RS23680 (BG493_23665) | 24733..26559 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BG493_RS23685 (BG493_23670) | 26556..26975 | - | 420 | WP_001229397.1 | HNH endonuclease signature motif containing protein | - |
| BG493_RS23690 (BG493_23675) | 27012..27650 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BG493_RS23695 (BG493_23680) | 27635..27943 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| BG493_RS23700 (BG493_23685) | 27962..28954 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| BG493_RS23705 (BG493_23690) | 28951..29583 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| BG493_RS23710 (BG493_23695) | 29580..29966 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| BG493_RS23715 (BG493_23700) | 29941..32589 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| BG493_RS23720 (BG493_23705) | 32605..32868 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| BG493_RS23725 (BG493_23710) | 32985..33452 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| BG493_RS23730 (BG493_23715) | 33445..33666 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| BG493_RS23735 (BG493_23720) | 33801..34316 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BG493_RS23740 (BG493_23725) | 34313..34558 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| BG493_RS23745 (BG493_23730) | 34536..35132 | - | 597 | WP_000527896.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| BG493_RS23750 (BG493_23735) | 35122..36543 | - | 1422 | WP_000146700.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| BG493_RS23755 (BG493_23740) | 36543..37283 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| BG493_RS23760 (BG493_23745) | 37270..37836 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| BG493_RS23765 (BG493_23750) | 37858..38169 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| BG493_RS23770 (BG493_23755) | 38184..38546 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| BG493_RS23775 (BG493_23760) | 38588..38815 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| BG493_RS23780 (BG493_23765) | 38909..39595 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| BG493_RS23785 (BG493_23770) | 39788..40168 | - | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| BG493_RS23790 (BG493_23775) | 40583..41053 | + | 471 | WP_001526856.1 | hypothetical protein | VF |
| BG493_RS23795 (BG493_23780) | 41364..42182 | - | 819 | Protein_49 | DUF945 domain-containing protein | - |
| BG493_RS23800 (BG493_23785) | 42285..42443 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| BG493_RS24305 | 42529..42657 | - | 129 | WP_000372429.1 | hypothetical protein | - |
| BG493_RS23805 (BG493_23790) | 42692..43429 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| BG493_RS23810 (BG493_23795) | 43426..43860 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| BG493_RS23815 (BG493_23800) | 43900..45897 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| BG493_RS23820 (BG493_23805) | 45966..46208 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| BG493_RS23825 (BG493_23810) | 46263..46781 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| BG493_RS23830 (BG493_23815) | 47375..47647 | - | 273 | WP_220547531.1 | hypothetical protein | - |
| BG493_RS23835 (BG493_23820) | 47611..47934 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| BG493_RS23840 (BG493_23825) | 48170..48604 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| BG493_RS23845 (BG493_23830) | 48671..49105 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| BG493_RS23850 (BG493_23835) | 49601..50365 | - | 765 | WP_001246548.1 | membrane protein | - |
| BG493_RS23855 (BG493_23840) | 50437..50850 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| BG493_RS23860 (BG493_23845) | 50906..51127 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| BG493_RS23865 (BG493_23850) | 51127..51807 | - | 681 | WP_000088645.1 | DNA methylase | - |
| BG493_RS24310 | 51970..52251 | + | 282 | WP_146671468.1 | hypothetical protein | - |
| BG493_RS23870 (BG493_23855) | 52189..52545 | - | 357 | WP_070130127.1 | hypothetical protein | - |
| BG493_RS23875 (BG493_23860) | 52538..53008 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| BG493_RS23880 (BG493_23865) | 53519..53941 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BG493_RS23885 (BG493_23870) | 53941..55215 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| BG493_RS23890 (BG493_23875) | 55297..56271 | - | 975 | WP_000064274.1 | ParB family protein | - |
| BG493_RS23895 (BG493_23880) | 56271..57476 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| BG493_RS23900 (BG493_23885) | 57891..58832 | + | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| BG493_RS23905 (BG493_23890) | 58829..59430 | - | 602 | Protein_73 | DUF2913 family protein | - |
| BG493_RS23910 (BG493_23895) | 59487..59903 | - | 417 | WP_000988946.1 | hypothetical protein | - |
| BG493_RS23915 (BG493_23900) | 60006..60422 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| BG493_RS23920 (BG493_23905) | 60508..61623 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| BG493_RS23925 (BG493_23910) | 61882..62370 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| BG493_RS23930 (BG493_23915) | 63025..63765 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| BG493_RS23935 (BG493_23920) | 63972..64532 | + | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| BG493_RS23940 (BG493_23925) | 64516..66180 | + | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| BG493_RS23945 (BG493_23930) | 66113..67138 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| BG493_RS23950 (BG493_23935) | 67327..68364 | - | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| BG493_RS23955 (BG493_23940) | 68972..69865 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| BG493_RS23960 (BG493_23945) | 70039..70203 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| BG493_RS23965 (BG493_23950) | 70377..71144 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| BG493_RS23970 (BG493_23955) | 71107..71274 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| BG493_RS23975 (BG493_23960) | 71326..73101 | + | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| BG493_RS23980 (BG493_23965) | 73382..74107 | + | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| BG493_RS23985 (BG493_23970) | 74368..75018 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| BG493_RS23990 (BG493_23975) | 75145..75569 | - | 425 | Protein_90 | IS200-IS605 family transposase ISEc46 | Transposase |
| BG493_RS23995 (BG493_23980) | 75626..75976 | + | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| BG493_RS24000 (BG493_23985) | 76043..76603 | - | 561 | WP_000900095.1 | Invasin | VF |
| BG493_RS24005 (BG493_23990) | 76759..77046 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| BG493_RS24010 (BG493_23995) | 77323..77808 | - | 486 | WP_000905606.1 | membrane protein | - |
| BG493_RS24015 (BG493_24000) | 77802..78290 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| BG493_RS24020 (BG493_24005) | 78477..79028 | - | 552 | WP_000545754.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| BG493_RS24025 (BG493_24010) | 79037..79819 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| BG493_RS24030 (BG493_24015) | 79854..80375 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| BG493_RS24035 (BG493_24020) | 80372..80662 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| BG493_RS24040 (BG493_24025) | 80664..80969 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BG493_RS24045 (BG493_24030) | 80971..81189 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BG493_RS24050 (BG493_24035) | 81865..82386 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| BG493_RS24315 | 82430..82858 | - | 429 | Protein_103 | hypothetical protein | - |
| BG493_RS24055 (BG493_24040) | 82870..83166 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| BG493_RS24060 (BG493_24045) | 83660..84649 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| BG493_RS24065 (BG493_24050) | 84908..85352 | - | 445 | Protein_106 | tyrosine-type recombinase/integrase | - |
| BG493_RS24070 (BG493_24055) | 85521..85902 | - | 382 | Protein_107 | YgiW/YdeI family stress tolerance OB fold protein | - |
| BG493_RS24075 (BG493_24060) | 86621..86923 | + | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| BG493_RS24080 (BG493_24065) | 87198..87716 | + | 519 | WP_000748205.1 | hypothetical protein | VF |
| BG493_RS24085 (BG493_24070) | 87944..90352 | + | 2409 | WP_000007893.1 | Outer membrane usher protein FimD | VF |
| BG493_RS24090 (BG493_24075) | 90345..91037 | + | 693 | WP_001038510.1 | Chaperone protein FaeE | VF |
| BG493_RS24095 (BG493_24080) | 91052..91609 | + | 558 | WP_010999940.1 | membrane protein | - |
| BG493_RS24100 (BG493_24085) | 91862..92737 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| BG493_RS24105 (BG493_24090) | 93169..93381 | + | 213 | WP_000004313.1 | hypothetical protein | VF |
| BG493_RS24110 (BG493_24095) | 93366..93716 | + | 351 | WP_001526811.1 | Transcriptional regulatory protein RcsB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|