MGE detailed information
MGE type: Conjugative plasmid MGE length: 71810 bp
Accession: NZ_CP074408 Location: 1..71810 Organism: Escherichia coli strain GDAR2-2 Replicon: plasmid p1-2AR
Accession: NZ_CP074408 Location: 1..71810 Organism: Escherichia coli strain GDAR2-2 Replicon: plasmid p1-2AR
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHW16_RS23855 () | 509..1018 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| KHW16_RS23860 () | 1032..1763 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| KHW16_RS23865 () | 1966..2745 | + | 780 | WP_124995243.1 | hypothetical protein | - |
| KHW16_RS23870 () | 2742..5075 | + | 2334 | WP_238557833.1 | Coupling protein TraD | VF |
| KHW16_RS23875 () | 5075..10345 | + | 5271 | WP_238557834.1 | Multifunctional conjugation protein TraI | Relaxase |
| KHW16_RS23880 () | 10365..11111 | + | 747 | WP_019842127.1 | conjugal transfer pilus acetylase TraX | - |
| KHW16_RS23885 () | 11166..11723 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| KHW16_RS23890 () | 11875..12078 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| KHW16_RS23895 () | 12820..13281 | + | 462 | WP_019842128.1 | thermonuclease family protein | - |
| KHW16_RS23900 () | 13550..13768 | + | 219 | WP_023150739.1 | hypothetical protein | - |
| KHW16_RS23905 () | 13921..14358 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - () | 14453..14509 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 14453..14509 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 14453..14509 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 14453..14509 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| KHW16_RS23910 () | 14557..14706 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| KHW16_RS23915 () | 14991..15248 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| KHW16_RS23920 () | 15484..15558 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KHW16_RS23925 () | 15551..16408 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| KHW16_RS23930 () | 17321..17458 | + | 138 | Protein_16 | XRE family transcriptional regulator | - |
| KHW16_RS23935 () | 17478..17741 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| KHW16_RS23940 () | 17731..18030 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KHW16_RS23945 () | 18066..18731 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| KHW16_RS23950 () | 18919..19779 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KHW16_RS23955 () | 19962..20519 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| KHW16_RS23960 () | 20683..23688 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KHW16_RS23965 () | 24256..24819 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| KHW16_RS23970 () | 24823..25554 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| KHW16_RS23975 () | 25551..26276 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| KHW16_RS23980 () | 26286..27425 | - | 1140 | WP_224223109.1 | YcaO-like family protein | - |
| KHW16_RS23985 () | 27457..28275 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| KHW16_RS23990 () | 28277..29131 | - | 855 | WP_016235969.1 | McbB family protein | - |
| KHW16_RS23995 () | 29191..29400 | - | 210 | WP_001535752.1 | microcin B17 family TOMM | - |
| KHW16_RS24000 () | 29930..30382 | + | 453 | WP_000670962.1 | acyltransferase | - |
| KHW16_RS24005 () | 30785..31135 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| KHW16_RS24010 () | 31138..32100 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| KHW16_RS24015 () | 32248..32541 | + | 294 | WP_002430945.1 | hypothetical protein | - |
| KHW16_RS24020 () | 32636..33538 | + | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| KHW16_RS24025 () | 33535..33846 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| KHW16_RS24030 () | 33922..34605 | + | 684 | WP_000086169.1 | DNA methylase | - |
| KHW16_RS24035 () | 34606..34827 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| KHW16_RS24040 () | 34757..35275 | + | 519 | WP_227910476.1 | DUF1380 family protein | - |
| KHW16_RS24045 () | 35320..36090 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| KHW16_RS24050 () | 36506..36931 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| KHW16_RS24055 () | 36978..37397 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| KHW16_RS24060 () | 37397..37588 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| KHW16_RS24065 () | 37567..38038 | - | 472 | Protein_43 | hypothetical protein | - |
| KHW16_RS24070 () | 38556..38786 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| KHW16_RS24075 () | 38838..40199 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| KHW16_RS24080 () | 40246..40809 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| KHW16_RS24085 () | 40895..41326 | - | 432 | Protein_47 | hypothetical protein | - |
| KHW16_RS24090 () | 41628..42155 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| KHW16_RS24095 () | 42213..42446 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| KHW16_RS24100 () | 42507..44471 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| KHW16_RS24105 () | 44540..44974 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| KHW16_RS24110 () | 44971..45733 | + | 763 | Protein_52 | plasmid SOS inhibition protein A | - |
| - () | 45702..45926 | + | 225 | NuclAT_0 | - | - |
| - () | 45702..45926 | + | 225 | NuclAT_0 | - | - |
| - () | 45702..45926 | + | 225 | NuclAT_0 | - | - |
| - () | 45702..45926 | + | 225 | NuclAT_0 | - | - |
| KHW16_RS24115 () | 45711..45890 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - | 45859..45924 | - | 66 | - | - | Antitoxin Detail |
| KHW16_RS24120 () | 45912..46061 | + | 150 | Protein_54 | plasmid maintenance protein Mok | - |
| KHW16_RS24125 () | 46003..46128 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KHW16_RS24130 () | 46447..46744 | - | 298 | Protein_56 | hypothetical protein | - |
| KHW16_RS24135 () | 47044..47340 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| KHW16_RS24140 () | 47451..48272 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| KHW16_RS24145 () | 48569..49171 | - | 603 | Protein_59 | hypothetical protein | VF |
| KHW16_RS24150 () | 49492..49875 | + | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KHW16_RS24155 () | 50062..50751 | + | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| KHW16_RS24160 () | 50844..51245 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| KHW16_RS24165 () | 51278..51637 | + | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| KHW16_RS24170 () | 51652..51963 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| KHW16_RS24175 () | 51985..52551 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| KHW16_RS24180 () | 52538..53266 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| KHW16_RS24185 () | 53266..54717 | + | 1452 | WP_000146663.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KHW16_RS24190 () | 54707..55273 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KHW16_RS24195 () | 55260..55577 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| KHW16_RS24200 () | 55577..56092 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KHW16_RS24205 () | 56227..56448 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| KHW16_RS24210 () | 56441..56918 | + | 478 | Protein_72 | hypothetical protein | - |
| KHW16_RS24215 () | 56998..57216 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| KHW16_RS24220 () | 57244..57591 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| KHW16_RS24225 () | 57717..60347 | + | 2631 | WP_032152342.1 | type IV secretion system protein TraC | - |
| KHW16_RS24230 () | 60344..60730 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| KHW16_RS24235 () | 60727..61359 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| KHW16_RS24240 () | 61356..62348 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| KHW16_RS24245 () | 62378..62683 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| KHW16_RS24250 () | 62692..63330 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KHW16_RS24255 () | 63327..65177 | + | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KHW16_RS24260 () | 65204..65461 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| KHW16_RS24265 () | 65454..66197 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KHW16_RS24270 () | 66211..66555 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| KHW16_RS24275 () | 66674..66958 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KHW16_RS24280 () | 66945..67490 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KHW16_RS24285 () | 67420..67767 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| KHW16_RS24290 () | 67748..68140 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| KHW16_RS24295 () | 68127..69500 | + | 1374 | WP_001535740.1 | conjugal transfer pilus assembly protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|