MGE detailed information
MGE type: Conjugative plasmid MGE length: 92777 bp
Accession: NZ_CP074358 Location: 1..92777 Organism: Escherichia coli strain XJ6.1 Replicon: plasmid unnamed2
Accession: NZ_CP074358 Location: 1..92777 Organism: Escherichia coli strain XJ6.1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFQ18_RS24625 (669) | 669..1417 | - | 749 | Protein_0 | hypothetical protein | VF |
| KFQ18_RS24630 (1631) | 1631..1876 | + | 246 | Protein_1 | Tn3 family transposase | - |
| KFQ18_RS24635 (2202) | 2202..3027 | + | 826 | Protein_2 | Transposon Tn10 TetD protein | VF |
| KFQ18_RS24640 (3066) | 3066..3516 | - | 451 | Protein_3 | IS110 family transposase | - |
| KFQ18_RS24645 (3870) | 3870..4636 | + | 767 | Protein_4 | transposase | - |
| KFQ18_RS24650 (4636) | 4636..4871 | - | 236 | Protein_5 | transposase | - |
| KFQ18_RS24660 (6348) | 6348..7508 | - | 1161 | WP_275877728.1 | hypothetical protein | - |
| KFQ18_RS24665 (7531) | 7531..8157 | - | 627 | WP_275877729.1 | fimbrial protein | - |
| KFQ18_RS24670 (8114) | 8114..8800 | - | 687 | WP_275877730.1 | fimbria/pilus periplasmic chaperone | - |
| KFQ18_RS24675 (8791) | 8791..11298 | - | 2508 | WP_275877731.1 | Outer membrane usher protein SfmD | VF |
| KFQ18_RS24680 (11328) | 11328..11768 | - | 441 | WP_275877732.1 | fimbria/pilus periplasmic chaperone | - |
| KFQ18_RS24685 (11749) | 11749..12453 | - | 705 | WP_275877733.1 | molecular chaperone | - |
| KFQ18_RS24690 (12519) | 12519..13112 | - | 594 | WP_275877734.1 | S-fimbrial protein subunit SfaG | VF |
| KFQ18_RS24695 (13784) | 13784..14440 | - | 657 | WP_275877735.1 | DsbA family protein | - |
| KFQ18_RS24700 (14735) | 14735..14846 | - | 112 | Protein_15 | IS1 family transposase | - |
| KFQ18_RS24705 (15649) | 15649..16449 | + | 801 | WP_275877736.1 | helix-turn-helix transcriptional regulator | - |
| KFQ18_RS24710 (16612) | 16612..17010 | - | 399 | WP_275877737.1 | hypothetical protein | - |
| KFQ18_RS24715 (17970) | 17970..18542 | - | 573 | WP_275877738.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| KFQ18_RS24720 (19167) | 19167..20267 | - | 1101 | WP_275877739.1 | glycosyltransferase | - |
| KFQ18_RS24725 (20764) | 20764..21399 | + | 636 | WP_275877740.1 | DsbA family protein | - |
| KFQ18_RS24730 (21872) | 21872..22048 | + | 177 | WP_275877744.1 | transcriptional regulator | - |
| KFQ18_RS24735 (22169) | 22169..22909 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| KFQ18_RS24740 (23194) | 23194..24171 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| KFQ18_RS24745 (25011) | 25011..25652 | - | 642 | WP_000990665.1 | hypothetical protein | - |
| KFQ18_RS24750 (27768) | 27768..28058 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| KFQ18_RS24755 (28048) | 28048..28947 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| KFQ18_RS24760 (28997) | 28997..31222 | - | 2226 | WP_275877741.1 | P-loop NTPase fold protein | - |
| KFQ18_RS24765 (31224) | 31224..32312 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| KFQ18_RS24770 (32968) | 32968..33237 | + | 270 | WP_275877742.1 | hypothetical protein | - |
| KFQ18_RS24775 (33230) | 33230..33523 | + | 294 | Protein_30 | hypothetical protein | - |
| KFQ18_RS24780 (33585) | 33585..34747 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| KFQ18_RS24785 (35001) | 35001..35792 | + | 792 | WP_275877743.1 | site-specific integrase | - |
| KFQ18_RS24790 (35930) | 35930..36205 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| KFQ18_RS24795 (36199) | 36199..36843 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| KFQ18_RS24800 (37072) | 37072..38043 | + | 972 | WP_001103691.1 | plasmid segregation protein ParM | - |
| KFQ18_RS24805 (38048) | 38048..38440 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| KFQ18_RS24810 (38445) | 38445..39716 | - | 1272 | WP_021563940.1 | Y-family DNA polymerase | - |
| KFQ18_RS24815 (39716) | 39716..40153 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KFQ18_RS24820 (40150) | 40150..40398 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KFQ18_RS24825 (40814) | 40814..41716 | + | 903 | WP_122987030.1 | DUF1281 domain-containing protein | - |
| KFQ18_RS24830 (41713) | 41713..42024 | + | 312 | WP_047662408.1 | hypothetical protein | - |
| KFQ18_RS24835 (42101) | 42101..42784 | + | 684 | WP_047662407.1 | DNA methylase | - |
| KFQ18_RS24840 (42785) | 42785..43006 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| KFQ18_RS24845 (42900) | 42900..43453 | + | 554 | Protein_44 | DUF1380 family protein | - |
| KFQ18_RS24850 (43504) | 43504..44282 | + | 779 | Protein_45 | hypothetical protein | - |
| KFQ18_RS24855 (44699) | 44699..45124 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KFQ18_RS24860 (45171) | 45171..45593 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| KFQ18_RS24865 (45590) | 45590..45781 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| KFQ18_RS24870 (46014) | 46014..46117 | - | 104 | Protein_49 | hypothetical protein | - |
| KFQ18_RS24875 (46631) | 46631..46861 | + | 231 | WP_032151918.1 | hypothetical protein | - |
| KFQ18_RS24880 (46913) | 46913..48274 | + | 1362 | WP_032151919.1 | DUF3560 domain-containing protein | - |
| KFQ18_RS24885 (48322) | 48322..48885 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| KFQ18_RS24890 (48911) | 48911..49126 | + | 216 | WP_032235513.1 | hypothetical protein | - |
| KFQ18_RS24895 (49036) | 49036..49296 | + | 261 | WP_072250151.1 | hypothetical protein | - |
| KFQ18_RS24900 (49537) | 49537..49743 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| KFQ18_RS24905 (49769) | 49769..50308 | + | 540 | WP_000290838.1 | single-stranded DNA-binding protein | - |
| KFQ18_RS24910 (50371) | 50371..50604 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| KFQ18_RS24915 (50670) | 50670..52628 | + | 1959 | WP_275877718.1 | ParB/RepB/Spo0J family partition protein | - |
| KFQ18_RS24920 (52683) | 52683..53117 | + | 435 | WP_001470779.1 | conjugation system SOS inhibitor PsiB | - |
| KFQ18_RS24925 (53114) | 53114..53876 | + | 763 | Protein_60 | plasmid SOS inhibition protein A | - |
| KFQ18_RS24930 (53845) | 53845..54033 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (53845) | 53845..54069 | + | 225 | NuclAT_0 | - | - |
| - (53845) | 53845..54069 | + | 225 | NuclAT_0 | - | - |
| - (53845) | 53845..54069 | + | 225 | NuclAT_0 | - | - |
| - (53845) | 53845..54069 | + | 225 | NuclAT_0 | - | - |
| KFQ18_RS24935 (54055) | 54055..54204 | + | 150 | Protein_62 | plasmid maintenance protein Mok | - |
| KFQ18_RS24940 (54146) | 54146..54271 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KFQ18_RS24945 (54491) | 54491..54721 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| KFQ18_RS24950 (54719) | 54719..54892 | - | 174 | Protein_65 | hypothetical protein | - |
| KFQ18_RS24955 (54963) | 54963..55169 | + | 207 | WP_275877719.1 | single-stranded DNA-binding protein | - |
| KFQ18_RS24960 (55194) | 55194..55481 | + | 288 | WP_000107548.1 | hypothetical protein | - |
| KFQ18_RS24965 (55601) | 55601..56421 | + | 821 | Protein_68 | DUF932 domain-containing protein | - |
| KFQ18_RS24970 (56718) | 56718..57320 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| KFQ18_RS24975 (57641) | 57641..58024 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KFQ18_RS24980 (58211) | 58211..58900 | + | 690 | WP_000283384.1 | conjugal transfer transcriptional regulator TraJ | - |
| KFQ18_RS24985 (58993) | 58993..59394 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| KFQ18_RS24990 (59427) | 59427..59786 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| KFQ18_RS24995 (59801) | 59801..60112 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| KFQ18_RS25000 (60134) | 60134..60700 | + | 567 | WP_275877720.1 | type IV conjugative transfer system protein TraE | - |
| KFQ18_RS25005 (60687) | 60687..61415 | + | 729 | WP_001230766.1 | type-F conjugative transfer system secretin TraK | - |
| KFQ18_RS25010 (61415) | 61415..62842 | + | 1428 | WP_000146655.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KFQ18_RS25015 (62832) | 62832..63422 | + | 591 | WP_001523507.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KFQ18_RS25020 (63409) | 63409..63606 | + | 198 | WP_001454499.1 | conjugal transfer protein TrbD | - |
| KFQ18_RS25025 (63618) | 63618..63869 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| KFQ18_RS25030 (63866) | 63866..64381 | + | 516 | WP_025269857.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KFQ18_RS25035 (64516) | 64516..64737 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| KFQ18_RS25040 (64897) | 64897..67524 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| KFQ18_RS25045 (67521) | 67521..67907 | + | 387 | WP_000099689.1 | type-F conjugative transfer system protein TrbI | - |
| KFQ18_RS25050 (67904) | 67904..68536 | + | 633 | WP_275877721.1 | type-F conjugative transfer system protein TraW | - |
| KFQ18_RS25055 (68533) | 68533..69525 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| KFQ18_RS25060 (69534) | 69534..70172 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KFQ18_RS25065 (70169) | 70169..71977 | + | 1809 | WP_032200982.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KFQ18_RS25070 (72004) | 72004..72261 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| KFQ18_RS25075 (72254) | 72254..72997 | + | 744 | WP_275877722.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KFQ18_RS25080 (73013) | 73013..73360 | + | 348 | WP_001287902.1 | conjugal transfer protein TrbA | - |
| KFQ18_RS25085 (73479) | 73479..73763 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KFQ18_RS25090 (73750) | 73750..74295 | + | 546 | WP_275877723.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KFQ18_RS25095 (74225) | 74225..74587 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| KFQ18_RS25100 (74587) | 74587..75960 | + | 1374 | WP_210557953.1 | conjugal transfer pilus assembly protein TraH | - |
| KFQ18_RS25105 (75957) | 75957..78779 | + | 2823 | WP_275877724.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KFQ18_RS25110 (78794) | 78794..79297 | + | 504 | WP_061583830.1 | surface exclusion protein | - |
| KFQ18_RS25115 (79329) | 79329..80060 | + | 732 | WP_275877745.1 | conjugal transfer complement resistance protein TraT | - |
| KFQ18_RS25120 (80313) | 80313..82502 | + | 2190 | WP_275877725.1 | type IV conjugative transfer system coupling protein TraD | - |
| KFQ18_RS25125 (82502) | 82502..87772 | + | 5271 | WP_275877726.1 | Multifunctional conjugation protein TraI | Relaxase |
| KFQ18_RS25130 (87792) | 87792..88538 | + | 747 | Protein_101 | conjugal transfer pilus acetylase TraX | - |
| KFQ18_RS25135 (88593) | 88593..89153 | + | 561 | WP_001523482.1 | fertility inhibition protein FinO | - |
| KFQ18_RS25140 (89288) | 89288..89500 | + | 213 | WP_063079259.1 | hypothetical protein | - |
| KFQ18_RS25145 (89744) | 89744..89830 | + | 87 | Protein_104 | endonuclease | - |
| KFQ18_RS25150 (90011) | 90011..90322 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| - (90618) | 90618..90679 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (90618) | 90618..90679 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (90618) | 90618..90679 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (90618) | 90618..90679 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| KFQ18_RS25155 (90723) | 90723..90872 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| KFQ18_RS25160 (91156) | 91156..91413 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| KFQ18_RS25165 (91647) | 91647..91721 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| KFQ18_RS25170 (91714) | 91714..92571 | + | 858 | WP_000130970.1 | incFII family plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|