MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43235 bp
Accession: NZ_CP074182 Location: 5153135..5196369 Organism: Raoultella planticola strain JBIWA001 Replicon: chromosome
Accession: NZ_CP074182 Location: 5153135..5196369 Organism: Raoultella planticola strain JBIWA001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGP19_RS24415 (KGP19_24350) | 5148275..5150077 | + | 1803 | WP_064793417.1 | protein-disulfide reductase DsbD | - |
| KGP19_RS24420 (KGP19_24355) | 5150098..5150688 | + | 591 | WP_004856931.1 | transcriptional regulator | - |
| KGP19_RS24425 (KGP19_24360) | 5150872..5152959 | + | 2088 | WP_046853224.1 | DUF1176 domain-containing protein | - |
| KGP19_RS24435 (KGP19_24370) | 5153312..5154580 | + | 1269 | WP_057108511.1 | hypothetical protein ; Integrase | Integrase |
| KGP19_RS24440 (KGP19_24375) | 5155463..5156389 | + | 927 | WP_057108510.1 | hypothetical protein | - |
| KGP19_RS24445 (KGP19_24380) | 5156525..5156710 | + | 186 | WP_057107840.1 | AlpA family transcriptional regulator | - |
| KGP19_RS24450 (KGP19_24385) | 5156736..5157323 | + | 588 | WP_077822678.1 | DUF2857 domain-containing protein | - |
| KGP19_RS24455 (KGP19_24390) | 5157313..5157522 | + | 210 | WP_057108508.1 | TraR/DksA family transcriptional regulator | - |
| KGP19_RS24460 (KGP19_24395) | 5157917..5158150 | + | 234 | WP_064388616.1 | hypothetical protein | - |
| KGP19_RS24465 (KGP19_24400) | 5158227..5158937 | + | 711 | WP_057108507.1 | hypothetical protein | VF |
| KGP19_RS24470 (KGP19_24405) | 5158937..5159230 | + | 294 | WP_057108506.1 | hypothetical protein | VF |
| KGP19_RS24475 (KGP19_24410) | 5159241..5161985 | + | 2745 | WP_223525990.1 | hypothetical protein | VF |
| KGP19_RS24480 (KGP19_24415) | 5162006..5162710 | + | 705 | WP_057108504.1 | type IV secretion system protein | - |
| KGP19_RS24485 (KGP19_24420) | 5162729..5162956 | + | 228 | WP_171847087.1 | EexN family lipoprotein | - |
| KGP19_RS24490 (KGP19_24425) | 5162968..5164035 | + | 1068 | WP_064388579.1 | type IV secretion system protein | - |
| KGP19_RS24495 (KGP19_24430) | 5164129..5164266 | + | 138 | WP_164887140.1 | hypothetical protein | - |
| KGP19_RS24500 (KGP19_24435) | 5164259..5164942 | + | 684 | WP_064388587.1 | hypothetical protein | VF |
| KGP19_RS24505 (KGP19_24440) | 5164942..5165847 | + | 906 | WP_064388589.1 | hypothetical protein | VF |
| KGP19_RS24510 (KGP19_24445) | 5165867..5167087 | + | 1221 | WP_064388590.1 | hypothetical protein | VF |
| KGP19_RS24515 (KGP19_24450) | 5167077..5168102 | + | 1026 | WP_064388592.1 | hypothetical protein | VF |
| KGP19_RS24520 (KGP19_24455) | 5168099..5168497 | + | 399 | WP_057108599.1 | cag pathogenicity island Cag12 family protein | - |
| KGP19_RS24525 (KGP19_24460) | 5168546..5168848 | + | 303 | WP_057108600.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KGP19_RS24530 (KGP19_24465) | 5168897..5169202 | + | 306 | WP_072146387.1 | dpoa decarboxylase | - |
| KGP19_RS24535 (KGP19_24470) | 5169274..5169627 | + | 354 | WP_196239630.1 | hypothetical protein | - |
| KGP19_RS24540 (KGP19_24475) | 5169978..5171714 | + | 1737 | WP_057108601.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KGP19_RS24545 (KGP19_24480) | 5171723..5172475 | + | 753 | WP_064388594.1 | MobC family replication-relaxation protein | - |
| KGP19_RS24550 (KGP19_24485) | 5172472..5172786 | - | 315 | WP_057108625.1 | CcdB family protein | Toxin Detail |
| KGP19_RS24555 (KGP19_24490) | 5172789..5173025 | - | 237 | WP_057108464.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| KGP19_RS24560 (KGP19_24495) | 5173348..5174292 | - | 945 | WP_057108463.1 | zincin-like metallopeptidase domain-containing protein | - |
| KGP19_RS24565 (KGP19_24500) | 5175170..5175463 | + | 294 | WP_223526217.1 | LysR substrate-binding domain-containing protein | - |
| KGP19_RS24570 (KGP19_24505) | 5175396..5175614 | + | 219 | Protein_4820 | IS256 family transposase ISSoEn2 | Transposase |
| KGP19_RS24575 | 5176247..5176543 | + | 297 | WP_223525992.1 | IS66 family transposase ISKox1 | Transposase |
| KGP19_RS24580 (KGP19_24515) | 5176686..5176865 | + | 180 | Protein_4822 | transcriptional regulator | - |
| KGP19_RS24585 (KGP19_24520) | 5176946..5177270 | + | 325 | Protein_4823 | helix-turn-helix domain-containing protein | - |
| KGP19_RS24590 (KGP19_24525) | 5177303..5177617 | - | 315 | Protein_4824 | transposase | - |
| KGP19_RS24595 (KGP19_24530) | 5177603..5178181 | + | 579 | Protein_4825 | IS66 family transposase ISSgsp1 | Transposase |
| KGP19_RS24600 (KGP19_24535) | 5178220..5179394 | - | 1175 | Protein_4826 | glycogen/starch/alpha-glucan phosphorylase | - |
| KGP19_RS24605 | 5179413..5179657 | - | 245 | Protein_4827 | starch synthase | - |
| KGP19_RS24610 (KGP19_24540) | 5179783..5181063 | - | 1281 | WP_057108459.1 | glucose-1-phosphate adenylyltransferase | - |
| KGP19_RS24615 (KGP19_24545) | 5181209..5183323 | - | 2115 | WP_223526218.1 | 1,4-alpha-glucan branching enzyme | - |
| KGP19_RS24620 (KGP19_24550) | 5184134..5184355 | - | 222 | WP_077267911.1 | hypothetical protein | - |
| KGP19_RS24625 (KGP19_24555) | 5184443..5184556 | + | 114 | Protein_4831 | toxin-antitoxin system, antitoxin component | - |
| KGP19_RS24635 (KGP19_24565) | 5187098..5188183 | - | 1086 | WP_223525993.1 | hypothetical protein | - |
| KGP19_RS24640 (KGP19_24570) | 5188183..5189781 | - | 1599 | WP_057108453.1 | restriction system-associated AAA family ATPase | - |
| KGP19_RS24645 (KGP19_24575) | 5189778..5191307 | - | 1530 | WP_057108452.1 | restriction endonuclease subunit S | - |
| KGP19_RS24650 (KGP19_24580) | 5191394..5192803 | - | 1410 | WP_057108451.1 | N-6 DNA methylase | - |
| KGP19_RS24655 | 5192953..5193121 | + | 169 | Protein_4837 | IS3 family transposase | - |
| KGP19_RS24660 (KGP19_24585) | 5193376..5193865 | + | 490 | Protein_4838 | MobC family replication-relaxation protein | - |
| KGP19_RS24665 (KGP19_24590) | 5194141..5195244 | - | 1104 | WP_064388374.1 | hypothetical protein | - |
| KGP19_RS24670 (KGP19_24595) | 5195337..5195825 | - | 489 | WP_057108449.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KGP19_RS24675 (KGP19_24600) | 5195822..5196115 | - | 294 | WP_038917748.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KGP19_RS24680 | 5196568..5196690 | + | 123 | Protein_4842 | DUF4102 domain-containing protein | - |
| KGP19_RS24685 (KGP19_24605) | 5196934..5197785 | + | 852 | WP_064793415.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| KGP19_RS24690 (KGP19_24610) | 5197887..5198456 | + | 570 | WP_046853227.1 | TetR/AcrR family transcriptional regulator | - |
| KGP19_RS24695 (KGP19_24615) | 5198562..5199482 | + | 921 | WP_032689869.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| KGP19_RS24700 (KGP19_24620) | 5199541..5200218 | + | 678 | WP_032698348.1 | NAD-dependent epimerase/dehydratase family protein | - |
| KGP19_RS24705 | 5200324..5200517 | + | 194 | Protein_4847 | DUF4942 domain-containing protein | - |
| KGP19_RS24710 (KGP19_24625) | 5200718..5201236 | - | 519 | WP_032697131.1 | FidL-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|