MGE detailed information
MGE type: Conjugative plasmid MGE length: 117877 bp
Accession: NZ_CP074144 Location: 1..117877 Organism: Serratia sp. JSRIV002 Replicon: plasmid pJSRIV002_1
Accession: NZ_CP074144 Location: 1..117877 Organism: Serratia sp. JSRIV002 Replicon: plasmid pJSRIV002_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGP26_RS28475 (KGP26_28390) | 514..1488 | - | 975 | WP_223498393.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| KGP26_RS28480 (KGP26_28395) | 1512..2024 | - | 513 | WP_223498392.1 | Protein FimG | VF |
| KGP26_RS28485 (KGP26_28400) | 2038..2568 | - | 531 | WP_223665705.1 | Protein FimF | VF |
| KGP26_RS28490 (KGP26_28405) | 2574..5159 | - | 2586 | WP_029712213.1 | Outer membrane usher protein FimD | VF |
| KGP26_RS28495 (KGP26_28410) | 5296..5940 | - | 645 | WP_223538576.1 | Chaperone protein FimC | VF |
| KGP26_RS28500 (KGP26_28415) | 6093..6635 | - | 543 | WP_024531355.1 | putative major fimbrial subunit LpfA | VF |
| KGP26_RS28505 (KGP26_28420) | 6704..7273 | - | 570 | WP_223498391.1 | Fimbrial subunit type 1 | VF |
| KGP26_RS28510 (KGP26_28425) | 7776..8171 | - | 396 | WP_223498390.1 | hypothetical protein | - |
| KGP26_RS28515 (KGP26_28430) | 8702..9543 | - | 842 | Protein_9 | ISKra4 family transposase ISKpn19 | Transposase |
| KGP26_RS28520 (KGP26_28435) | 9723..10268 | - | 546 | WP_245398329.1 | plasmid pRiA4b ORF-3 family protein | - |
| KGP26_RS28525 (KGP26_28440) | 11153..11323 | - | 171 | WP_223498411.1 | hypothetical protein | - |
| KGP26_RS28530 (KGP26_28445) | 11847..12161 | - | 315 | WP_223498410.1 | hypothetical protein | - |
| KGP26_RS28535 (KGP26_28450) | 12175..12507 | - | 333 | WP_223498409.1 | endoribonuclease MazF | Toxin Detail |
| KGP26_RS28540 (KGP26_28455) | 12507..12752 | - | 246 | WP_223498408.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| KGP26_RS28545 (KGP26_28460) | 12920..13126 | - | 207 | WP_223498407.1 | hypothetical protein | - |
| KGP26_RS28550 (KGP26_28465) | 13284..13514 | - | 231 | WP_223498406.1 | hypothetical protein | - |
| KGP26_RS28555 (KGP26_28470) | 13511..13834 | - | 324 | WP_223498405.1 | hypothetical protein | - |
| KGP26_RS28560 (KGP26_28475) | 13857..14096 | - | 240 | WP_223498404.1 | helix-turn-helix domain-containing protein | - |
| KGP26_RS28565 (KGP26_28480) | 14358..14852 | - | 495 | WP_223498403.1 | hypothetical protein | - |
| KGP26_RS28570 (KGP26_28485) | 15081..15908 | - | 828 | WP_223498402.1 | phosphoenolpyruvate hydrolase family protein | - |
| KGP26_RS28575 (KGP26_28490) | 15905..16366 | - | 462 | WP_223538574.1 | Tm-1-like ATP-binding domain-containing protein | - |
| KGP26_RS28580 (KGP26_28495) | 16444..17139 | - | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28585 (KGP26_28500) | 17578..18699 | + | 1122 | Protein_23 | AAA family ATPase | - |
| KGP26_RS28590 (KGP26_28505) | 18745..19704 | - | 960 | WP_223498399.1 | Recombination-promoting nuclease RpnA | VF |
| KGP26_RS28595 (KGP26_28510) | 20106..20801 | + | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28600 (KGP26_28515) | 20842..20985 | - | 144 | Protein_26 | IS6 family transposase ISYps1 | Transposase |
| KGP26_RS28605 (KGP26_28520) | 20985..21485 | - | 501 | WP_223665704.1 | hypothetical protein | - |
| KGP26_RS28610 (KGP26_28525) | 21644..22192 | - | 549 | WP_223498426.1 | Fimbrial adapter PapK | VF |
| KGP26_RS28615 (KGP26_28530) | 22202..22690 | - | 489 | WP_223498427.1 | putative fimbrial-like protein YfcQ | VF |
| KGP26_RS28620 (KGP26_28535) | 22702..23250 | - | 549 | WP_223498428.1 | putative fimbrial-like protein YfcQ | VF |
| KGP26_RS28625 (KGP26_28540) | 23243..23863 | - | 621 | WP_223498429.1 | fimbrial protein | - |
| KGP26_RS28630 (KGP26_28545) | 23904..24668 | - | 765 | WP_223498430.1 | putative fimbrial chaperone YfcS | VF |
| KGP26_RS28635 (KGP26_28550) | 24727..27234 | - | 2508 | WP_223499717.1 | Outer membrane usher protein PapC | VF |
| KGP26_RS28640 (KGP26_28555) | 27278..27829 | - | 552 | WP_223498431.1 | PAP fimbrial minor pilin protein | VF |
| KGP26_RS28645 (KGP26_28560) | 27899..28453 | - | 555 | WP_223498432.1 | Fimbria A protein | VF |
| KGP26_RS28650 (KGP26_28565) | 28773..29189 | - | 417 | WP_223499792.1 | hypothetical protein | - |
| KGP26_RS30345 | 29908..30039 | + | 132 | WP_256444966.1 | hypothetical protein | - |
| KGP26_RS28655 (KGP26_28575) | 30328..31149 | + | 822 | WP_223499791.1 | hypothetical protein | - |
| KGP26_RS28660 (KGP26_28580) | 31267..33000 | - | 1734 | WP_223499790.1 | ATP-binding protein | - |
| KGP26_RS28665 (KGP26_28585) | 33010..34023 | - | 1014 | WP_223499789.1 | SIR2 family protein | - |
| KGP26_RS28670 | 34499..34759 | - | 261 | WP_223499788.1 | DUF2913 family protein | - |
| KGP26_RS28675 (KGP26_28595) | 34788..35720 | - | 933 | WP_223499787.1 | Recombination-promoting nuclease RpnA | VF |
| KGP26_RS28680 (KGP26_28600) | 35972..36262 | + | 291 | WP_223499786.1 | hypothetical protein | - |
| KGP26_RS28685 (KGP26_28605) | 36463..36561 | + | 99 | Protein_44 | IS6 family transposase ISXne2 | Transposase |
| KGP26_RS28690 (KGP26_28610) | 36624..37319 | + | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28695 (KGP26_28615) | 37717..38139 | + | 423 | WP_245398331.1 | DUF2946 domain-containing protein | - |
| KGP26_RS28700 (KGP26_28620) | 38292..40424 | + | 2133 | WP_223499784.1 | TonB-dependent receptor | - |
| KGP26_RS28705 | 40630..40839 | - | 210 | Protein_48 | recombinase family protein | - |
| KGP26_RS28710 (KGP26_28630) | 40960..41655 | - | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28715 (KGP26_28635) | 41721..42134 | - | 414 | Protein_50 | IS6 family transposase ISYps1 | Transposase |
| KGP26_RS28720 (KGP26_28640) | 42191..42352 | + | 162 | Protein_51 | helix-turn-helix domain-containing protein | - |
| KGP26_RS28730 (KGP26_28650) | 43056..43313 | + | 258 | WP_223498386.1 | TraR/DksA family transcriptional regulator | - |
| KGP26_RS28735 (KGP26_28655) | 43540..43872 | + | 333 | WP_223498387.1 | hypothetical protein | - |
| KGP26_RS28740 (KGP26_28660) | 44361..44552 | - | 192 | WP_223499783.1 | phospholipase D-like domain-containing protein | - |
| KGP26_RS28745 (KGP26_28665) | 44634..45329 | + | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28750 (KGP26_28670) | 45367..45888 | - | 522 | WP_223499782.1 | IS3 family transposase ISAs9 | Transposase |
| KGP26_RS28755 | 46026..46538 | - | 513 | WP_223499781.1 | IS3 family transposase ISPa31 | Transposase |
| KGP26_RS28760 (KGP26_28680) | 47085..47252 | - | 168 | Protein_58 | IS3 family transposase ISBcen15 | Transposase |
| KGP26_RS28765 (KGP26_28685) | 47403..48263 | + | 861 | WP_223499780.1 | class I SAM-dependent methyltransferase | - |
| KGP26_RS28770 (KGP26_28690) | 48330..49025 | - | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS28775 (KGP26_28695) | 49875..50675 | + | 801 | WP_223499828.1 | IS91 family transposase ISMno23 | Transposase |
| KGP26_RS28780 (KGP26_28700) | 50925..51212 | - | 288 | WP_223499778.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KGP26_RS28785 (KGP26_28705) | 51202..51444 | - | 243 | WP_223499777.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KGP26_RS28790 (KGP26_28710) | 51747..52940 | + | 1194 | WP_223499776.1 | AAA family ATPase | - |
| KGP26_RS28795 (KGP26_28715) | 52949..53920 | + | 972 | WP_223499775.1 | ParB family protein | - |
| KGP26_RS28800 (KGP26_28720) | 54493..55227 | + | 735 | WP_223499774.1 | N-6 DNA methylase | - |
| KGP26_RS28805 (KGP26_28725) | 55152..55757 | + | 606 | WP_223499773.1 | IS66 family transposase ISCro1 | Transposase |
| KGP26_RS28810 (KGP26_28730) | 55754..56101 | + | 348 | WP_223499772.1 | IS66 family transposase ISCro1 | Transposase |
| KGP26_RS28815 (KGP26_28735) | 56121..57692 | + | 1572 | WP_223499771.1 | IS66 family transposase ISCro1 | Transposase |
| KGP26_RS28820 (KGP26_28740) | 57742..58386 | + | 645 | WP_223499770.1 | hypothetical protein | - |
| KGP26_RS28825 (KGP26_28745) | 58571..58780 | - | 210 | WP_223499769.1 | hypothetical protein | - |
| KGP26_RS28830 (KGP26_28750) | 58779..59207 | + | 429 | WP_223499768.1 | antirestriction protein | - |
| KGP26_RS28835 (KGP26_28755) | 59288..59545 | + | 258 | WP_223499767.1 | hypothetical protein | - |
| KGP26_RS28840 | 59776..59992 | - | 217 | Protein_74 | hypothetical protein | - |
| KGP26_RS28845 (KGP26_28760) | 60533..61012 | + | 480 | WP_223499766.1 | DNA repair protein RadC | - |
| KGP26_RS28850 (KGP26_28765) | 61054..61329 | + | 276 | WP_223499765.1 | homeobox domain-containing protein | - |
| KGP26_RS28855 (KGP26_28770) | 61577..62263 | + | 687 | WP_223499764.1 | PspA/IM30 family protein | - |
| KGP26_RS28860 (KGP26_28775) | 62253..62762 | + | 510 | WP_223499763.1 | hypothetical protein | - |
| KGP26_RS28865 (KGP26_28780) | 62804..63271 | + | 468 | WP_223499762.1 | hypothetical protein | - |
| KGP26_RS28870 (KGP26_28785) | 63268..63588 | + | 321 | WP_223499761.1 | hypothetical protein | - |
| KGP26_RS28875 (KGP26_28790) | 63740..64210 | + | 471 | WP_223499760.1 | hypothetical protein | - |
| KGP26_RS28880 (KGP26_28795) | 64370..64708 | + | 339 | WP_223499759.1 | hypothetical protein | - |
| KGP26_RS28885 (KGP26_28800) | 64757..65605 | + | 849 | WP_223499758.1 | ParA family protein | - |
| KGP26_RS28890 (KGP26_28805) | 65608..66936 | + | 1329 | WP_223499757.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP26_RS28895 (KGP26_28810) | 66937..67386 | + | 450 | WP_223499756.1 | hypothetical protein | - |
| KGP26_RS28900 (KGP26_28815) | 67383..67703 | + | 321 | WP_223499755.1 | hypothetical protein | - |
| KGP26_RS28905 (KGP26_28820) | 67746..68009 | + | 264 | WP_223499754.1 | hypothetical protein | - |
| KGP26_RS28910 (KGP26_28825) | 68270..68476 | + | 207 | WP_223499753.1 | hypothetical protein | - |
| KGP26_RS28915 (KGP26_28830) | 68521..68874 | + | 354 | WP_223499752.1 | DUF1870 family protein | - |
| KGP26_RS28920 (KGP26_28835) | 68889..70979 | + | 2091 | WP_223499751.1 | DEAD/DEAH box helicase | - |
| KGP26_RS28925 (KGP26_28840) | 71350..71655 | + | 306 | WP_223499750.1 | hypothetical protein | - |
| KGP26_RS28930 (KGP26_28845) | 71774..72097 | + | 324 | WP_059202210.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP26_RS28935 (KGP26_28850) | 72084..72365 | + | 282 | WP_223499749.1 | helix-turn-helix transcriptional regulator | - |
| KGP26_RS28940 (KGP26_28855) | 72782..73324 | - | 543 | WP_223499748.1 | hypothetical protein | - |
| KGP26_RS28945 (KGP26_28860) | 73321..74581 | - | 1261 | Protein_95 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KGP26_RS28950 (KGP26_28865) | 74593..75015 | - | 423 | WP_223499747.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KGP26_RS28955 (KGP26_28870) | 75432..75590 | + | 159 | WP_223499746.1 | hypothetical protein | - |
| KGP26_RS28960 (KGP26_28875) | 75595..76170 | - | 576 | WP_223499745.1 | hypothetical protein | - |
| KGP26_RS28965 (KGP26_28880) | 76871..78247 | + | 1377 | WP_223499824.1 | DUF3560 domain-containing protein | - |
| KGP26_RS28970 (KGP26_28885) | 78293..78868 | + | 576 | WP_223499823.1 | methyltransferase | - |
| KGP26_RS28975 (KGP26_28890) | 79816..80373 | + | 558 | WP_223499822.1 | single-stranded DNA-binding protein | - |
| KGP26_RS28980 (KGP26_28895) | 80429..80638 | + | 210 | WP_223499821.1 | DUF905 family protein | - |
| KGP26_RS28985 (KGP26_28900) | 80792..82759 | + | 1968 | WP_223499820.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP26_RS28990 (KGP26_28905) | 82799..83149 | + | 351 | WP_223499819.1 | conjugation system SOS inhibitor PsiB family protein | - |
| KGP26_RS28995 (KGP26_28910) | 83146..83466 | + | 321 | WP_223499818.1 | theronine dehydrogenase | - |
| KGP26_RS29000 (KGP26_28915) | 83568..83774 | + | 207 | WP_115160158.1 | hypothetical protein | - |
| KGP26_RS29005 (KGP26_28920) | 84465..84899 | + | 435 | WP_223499817.1 | hypothetical protein | - |
| KGP26_RS29010 (KGP26_28925) | 84943..85188 | + | 246 | WP_223499816.1 | hypothetical protein | - |
| KGP26_RS29015 (KGP26_28930) | 85281..86102 | + | 822 | WP_223499827.1 | N-6 DNA methylase | - |
| KGP26_RS29020 (KGP26_28935) | 86229..86531 | + | 303 | WP_050313120.1 | type II toxin-antitoxin system HigB family toxin | - |
| KGP26_RS29025 (KGP26_28940) | 86536..86895 | + | 360 | WP_050313121.1 | transcriptional regulator | - |
| KGP26_RS29030 (KGP26_28945) | 87636..88004 | + | 369 | WP_223499815.1 | hypothetical protein | - |
| KGP26_RS29035 (KGP26_28950) | 88064..88411 | + | 348 | WP_223499814.1 | hypothetical protein | - |
| KGP26_RS29040 (KGP26_28955) | 88506..88760 | + | 255 | WP_223499826.1 | hypothetical protein | - |
| KGP26_RS29045 (KGP26_28960) | 88807..88974 | - | 168 | WP_223499813.1 | hypothetical protein | - |
| KGP26_RS29050 (KGP26_28965) | 89006..89266 | - | 261 | WP_223499812.1 | hypothetical protein | - |
| KGP26_RS29055 (KGP26_28970) | 89527..90192 | + | 666 | WP_223499811.1 | hypothetical protein | - |
| KGP26_RS29060 (KGP26_28975) | 90258..91121 | + | 864 | WP_223538560.1 | hypothetical protein | - |
| KGP26_RS29065 (KGP26_28980) | 91513..91995 | - | 483 | WP_223499808.1 | hypothetical protein | VF |
| KGP26_RS29070 (KGP26_28985) | 92417..92812 | + | 396 | WP_223499807.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KGP26_RS29075 (KGP26_28990) | 93050..93829 | - | 780 | WP_223499806.1 | helix-turn-helix domain-containing protein | - |
| KGP26_RS29080 (KGP26_28995) | 94125..94283 | + | 159 | WP_223538575.1 | TraY domain-containing protein | - |
| KGP26_RS29085 (KGP26_29000) | 94536..94865 | + | 330 | WP_245398332.1 | TraY domain-containing protein | - |
| KGP26_RS29090 (KGP26_29005) | 94930..95280 | + | 351 | WP_223499803.1 | type IV conjugative transfer system pilin TraA | - |
| KGP26_RS29095 (KGP26_29010) | 95430..95735 | + | 306 | WP_065684418.1 | type IV conjugative transfer system protein TraL | - |
| KGP26_RS29100 (KGP26_29015) | 95750..96316 | + | 567 | WP_223499802.1 | type IV conjugative transfer system protein TraE | - |
| KGP26_RS29105 (KGP26_29020) | 96303..96959 | + | 657 | WP_223499829.1 | hypothetical protein | - |
| KGP26_RS29110 (KGP26_29025) | 96959..102205 | + | 5247 | WP_223499801.1 | Multifunctional conjugation protein TraI | Relaxase |
| KGP26_RS29115 (KGP26_29030) | 102207..102944 | + | 738 | WP_223499800.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| KGP26_RS29120 (KGP26_29035) | 103158..103625 | + | 468 | WP_223538561.1 | Phospholipase D | VF |
| KGP26_RS29125 (KGP26_29040) | 103771..104037 | + | 267 | WP_115160188.1 | replication regulatory protein RepA | - |
| KGP26_RS29130 (KGP26_29045) | 104454..105392 | + | 939 | WP_223499825.1 | Replication protein | - |
| KGP26_RS29135 (KGP26_29050) | 106385..106879 | + | 495 | WP_223499798.1 | GNAT family N-acetyltransferase | - |
| KGP26_RS29140 (KGP26_29055) | 107024..107281 | + | 258 | Protein_134 | IS3 family transposase ISBcen15 | Transposase |
| KGP26_RS29145 (KGP26_29060) | 107333..108028 | + | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS29150 (KGP26_29065) | 108084..108194 | + | 111 | Protein_136 | IS6 family transposase ISEas1 | Transposase |
| KGP26_RS29155 (KGP26_29070) | 108232..109206 | - | 975 | WP_223498416.1 | IS30 family transposase IS4351 | Transposase |
| KGP26_RS29160 (KGP26_29075) | 109297..109803 | - | 507 | Protein_138 | IS6 family transposase ISYps1 | Transposase |
| KGP26_RS29165 (KGP26_29080) | 109940..111100 | - | 1161 | WP_223498415.1 | chromate efflux transporter | - |
| KGP26_RS29170 (KGP26_29085) | 111097..111915 | - | 819 | WP_223538567.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| KGP26_RS29175 (KGP26_29090) | 111964..112974 | - | 1011 | WP_223498414.1 | sulfotransferase | - |
| KGP26_RS29180 (KGP26_29095) | 113188..113982 | - | 795 | WP_223498413.1 | sulfite exporter TauE/SafE family protein | - |
| KGP26_RS29185 (KGP26_29100) | 114323..115981 | - | 1659 | WP_223498412.1 | bifunctional sulfate adenylyltransferase/adenylylsulfate kinase | - |
| KGP26_RS29190 (KGP26_29105) | 116262..117767 | + | 1506 | Protein_144 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|