MGE detailed information
MGE type: Genomic_island MGE length: 14288 bp
Accession: NZ_CP074098 Location: 337125..351412 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain C_cip Replicon: chromosome
Accession: NZ_CP074098 Location: 337125..351412 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain C_cip Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFV01_RS01465 () | 332149..332595 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| KFV01_RS01470 () | 332614..336708 | + | 4095 | WP_212634397.1 | RHS repeat-associated core domain-containing protein | - |
| KFV01_RS01475 () | 336702..336965 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| KFV01_RS01480 () | 337029..337898 | + | 870 | Protein_288 | Protein RhsC | VF |
| KFV01_RS01485 () | 337892..338338 | + | 447 | WP_000935097.1 | protein SciX | - |
| KFV01_RS01490 () | 338901..339338 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| KFV01_RS01495 () | 339391..339666 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 339401..339823 | + | 423 | - | - | Antitoxin Detail |
| KFV01_RS24030 () | 339851..340024 | + | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| KFV01_RS01505 () | 340107..340385 | + | 279 | WP_077917538.1 | hypothetical protein | - |
| KFV01_RS01510 () | 340517..340765 | - | 249 | Protein_294 | SymE family type I addiction module toxin | - |
| KFV01_RS01515 () | 340818..341522 | + | 705 | Protein_295 | integrase core domain-containing protein | - |
| KFV01_RS01520 () | 342271..342783 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| KFV01_RS01525 () | 342867..343604 | + | 738 | WP_212634574.1 | Chaperone protein caf1M | VF |
| KFV01_RS01530 () | 343628..346138 | + | 2511 | WP_212634399.1 | F1 capsule-anchoring protein | VF |
| KFV01_RS01535 () | 346160..346630 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| KFV01_RS01540 () | 347036..347857 | + | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| KFV01_RS01545 () | 347940..348180 | + | 241 | Protein_301 | PerC family transcriptional regulator | - |
| KFV01_RS01550 () | 348672..349619 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| KFV01_RS01555 () | 349736..349951 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| KFV01_RS01560 () | 349955..350674 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| KFV01_RS01565 () | 351005..351412 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| KFV01_RS01570 () | 351791..352558 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| KFV01_RS01575 () | 352667..355111 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| KFV01_RS01580 () | 355351..355929 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.006 |