MGE detailed information
MGE type: Prophage MGE length: 106502 bp
Accession: NZ_CP074047 Location: 3617651..3724152 Organism: Escherichia coli strain PD7 Replicon: chromosome
Accession: NZ_CP074047 Location: 3617651..3724152 Organism: Escherichia coli strain PD7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU78_RS17405 (3612701) | 3612701..3613195 | + | 495 | WP_006809979.1 | hypothetical protein | - |
| KFU78_RS17410 (3613269) | 3613269..3613631 | - | 363 | Protein_3404 | inovirus Gp2 family protein | - |
| KFU78_RS17415 (3613778) | 3613778..3614758 | - | 981 | WP_032250279.1 | IS5-like element IS5 family transposase | - |
| KFU78_RS17420 (3615008) | 3615008..3615421 | + | 414 | Protein_3406 | gluconate permease | - |
| KFU78_RS17425 (3615471) | 3615471..3616166 | - | 696 | WP_000370411.1 | lactate utilization protein C | - |
| KFU78_RS17430 (3616159) | 3616159..3617586 | - | 1428 | WP_000023896.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| KFU78_RS17435 (3617651) | 3617651..3618340 | + | 690 | Protein_3409 | IS1 family transposase | - |
| KFU78_RS17440 (3618389) | 3618389..3618568 | - | 180 | Protein_3410 | IS5 family transposase ISSgl1 | Transposase |
| KFU78_RS17445 (3618784) | 3618784..3619647 | + | 864 | WP_001581464.1 | GTPase family protein | - |
| KFU78_RS17450 (3619739) | 3619739..3620560 | + | 822 | WP_001581463.1 | DUF932 domain-containing protein | - |
| KFU78_RS17455 (3620777) | 3620777..3621478 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| KFU78_RS17460 (3621519) | 3621519..3621755 | + | 237 | WP_001144031.1 | protein YpjK | - |
| KFU78_RS17465 (3621755) | 3621755..3622198 | + | 444 | WP_001581461.1 | lipoprotein YafY | - |
| KFU78_RS17470 (3622222) | 3622222..3622689 | + | 468 | WP_001581459.1 | protein YkfB | - |
| KFU78_RS17475 (3622766) | 3622766..3623005 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| KFU78_RS17480 (3623103) | 3623103..3623561 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| KFU78_RS17485 (3623577) | 3623577..3624053 | + | 477 | WP_001581457.1 | RadC family protein | - |
| KFU78_RS17490 (3624062) | 3624062..3624283 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| KFU78_RS17495 (3624302) | 3624302..3624619 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| KFU78_RS17500 (3624640) | 3624640..3624969 | + | 330 | WP_001581456.1 | toxin | Toxin Detail |
| KFU78_RS17505 (3625320) | 3625320..3626177 | - | 858 | WP_001581455.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KFU78_RS17510 (3626308) | 3626308..3627258 | - | 951 | WP_001581454.1 | D-ribose ABC transporter substrate-binding protein | - |
| KFU78_RS17515 (3627347) | 3627347..3628408 | - | 1062 | WP_001581452.1 | ABC transporter permease | - |
| KFU78_RS17520 (3628432) | 3628432..3629970 | - | 1539 | WP_001581451.1 | hypothetical protein | VF |
| KFU78_RS17525 (3629967) | 3629967..3630524 | - | 558 | WP_230796810.1 | DUF2291 domain-containing protein | - |
| KFU78_RS17530 (3631053) | 3631053..3632618 | + | 1566 | WP_001581449.1 | FGGY-family carbohydrate kinase | - |
| KFU78_RS17535 (3632639) | 3632639..3634162 | + | 1524 | WP_001581448.1 | glycerol-3-phosphate dehydrogenase | - |
| KFU78_RS17540 (3634173) | 3634173..3635105 | + | 933 | WP_001581447.1 | TIM barrel protein | - |
| KFU78_RS17545 (3635141) | 3635141..3635584 | + | 444 | WP_001581446.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| KFU78_RS17550 (3635588) | 3635588..3636544 | + | 957 | WP_001581444.1 | sugar-binding transcriptional regulator | - |
| KFU78_RS17555 (3636527) | 3636527..3637489 | - | 963 | WP_001581443.1 | sugar-binding transcriptional regulator | - |
| KFU78_RS17560 (3637548) | 3637548..3638318 | - | 771 | WP_001581442.1 | triose-phosphate isomerase family protein | - |
| KFU78_RS17565 (3638574) | 3638574..3639041 | + | 468 | WP_001581441.1 | ribose 5-phosphate isomerase B | - |
| KFU78_RS17570 (3639057) | 3639057..3640031 | + | 975 | WP_001581440.1 | transaldolase | - |
| KFU78_RS17575 (3640165) | 3640165..3640722 | - | 558 | WP_223232894.1 | branched-chain amino acid transport system II carrier protein | - |
| KFU78_RS17580 (3640676) | 3640676..3640897 | + | 222 | Protein_3438 | DUF945 domain-containing protein | - |
| KFU78_RS17585 (3641099) | 3641099..3641800 | + | 702 | WP_001581438.1 | WYL domain-containing protein | - |
| KFU78_RS17590 (3642172) | 3642172..3642315 | - | 144 | WP_257187789.1 | capsid protein | - |
| KFU78_RS17595 (3642394) | 3642394..3642537 | + | 144 | Protein_3441 | tail fiber assembly protein | - |
| KFU78_RS17600 (3642546) | 3642546..3642710 | - | 165 | WP_160140671.1 | hypothetical protein | - |
| KFU78_RS17605 (3643472) | 3643472..3643816 | - | 345 | Protein_3443 | hypothetical protein | - |
| KFU78_RS17610 (3643816) | 3643816..3644496 | - | 681 | WP_149543442.1 | DUF2612 domain-containing protein | - |
| KFU78_RS17615 (3644493) | 3644493..3645692 | - | 1200 | WP_257187790.1 | baseplate J/gp47 family protein | - |
| KFU78_RS17620 (3645692) | 3645692..3646045 | - | 354 | WP_001270637.1 | hypothetical protein | - |
| KFU78_RS17625 (3646045) | 3646045..3646800 | - | 756 | WP_024233996.1 | Gp138 family membrane-puncturing spike protein | - |
| KFU78_RS17630 (3646860) | 3646860..3647099 | - | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| KFU78_RS17635 (3647153) | 3647153..3647494 | - | 342 | WP_032162015.1 | hypothetical protein | - |
| KFU78_RS17640 (3647498) | 3647498..3648559 | - | 1062 | WP_149543440.1 | hypothetical protein | - |
| KFU78_RS17645 (3648562) | 3648562..3648864 | - | 303 | WP_016233440.1 | hypothetical protein | - |
| KFU78_RS17650 (3648864) | 3648864..3649451 | - | 588 | WP_149543439.1 | hypothetical protein | - |
| KFU78_RS17655 (3649451) | 3649451..3651439 | - | 1989 | WP_219394548.1 | lytic transglycosylase | - |
| KFU78_RS17660 (3651429) | 3651429..3651605 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| KFU78_RS17665 (3651617) | 3651617..3652069 | - | 453 | WP_023565715.1 | hypothetical protein | - |
| KFU78_RS17670 (3652073) | 3652073..3652513 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| KFU78_RS17675 (3652524) | 3652524..3653669 | - | 1146 | WP_064638156.1 | DUF3383 family protein | - |
| KFU78_RS17680 (3653673) | 3653673..3654236 | - | 564 | WP_033544654.1 | hypothetical protein | - |
| KFU78_RS17685 (3654211) | 3654211..3654600 | - | 390 | WP_257187791.1 | head-tail adaptor | - |
| KFU78_RS17690 (3654587) | 3654587..3655141 | - | 555 | WP_149543437.1 | hypothetical protein | - |
| KFU78_RS17695 (3655138) | 3655138..3655545 | - | 408 | WP_001125665.1 | DUF4054 domain-containing protein | - |
| KFU78_RS17700 (3655544) | 3655544..3655777 | + | 234 | Protein_3462 | hypothetical protein | - |
| KFU78_RS17705 (3655774) | 3655774..3656715 | - | 942 | WP_072859376.1 | DUF2184 domain-containing protein | - |
| KFU78_RS17710 (3656727) | 3656727..3657233 | - | 507 | WP_130075552.1 | hypothetical protein | - |
| KFU78_RS17715 (3657237) | 3657237..3658457 | - | 1221 | WP_248896272.1 | DUF2213 domain-containing protein | - |
| KFU78_RS17720 (3659300) | 3659300..3659902 | - | 603 | WP_244600508.1 | phage minor head protein | - |
| KFU78_RS17725 (3659919) | 3659919..3661385 | - | 1467 | WP_257187792.1 | DUF1073 domain-containing protein | - |
| KFU78_RS17730 (3661385) | 3661385..3663007 | - | 1623 | WP_001130777.1 | hypothetical protein | - |
| KFU78_RS17735 (3663010) | 3663010..3663561 | - | 552 | WP_096848660.1 | terminase small subunit | - |
| KFU78_RS17740 (3663586) | 3663586..3663822 | + | 237 | WP_247147033.1 | hypothetical protein | - |
| KFU78_RS17745 (3664118) | 3664118..3664660 | - | 543 | WP_004015017.1 | Rha family transcriptional regulator | - |
| KFU78_RS17750 (3664874) | 3664874..3665335 | - | 462 | WP_257187793.1 | lysis protein | - |
| KFU78_RS17755 (3665319) | 3665319..3665795 | - | 477 | WP_063121029.1 | glycoside hydrolase family protein | - |
| KFU78_RS17760 (3665779) | 3665779..3666102 | - | 324 | WP_015980128.1 | phage holin, lambda family | - |
| KFU78_RS17765 (3666536) | 3666536..3667159 | - | 624 | WP_001235459.1 | antitermination protein | - |
| KFU78_RS17770 (3667156) | 3667156..3667344 | - | 189 | WP_000994515.1 | protein ninH | - |
| KFU78_RS17775 (3667341) | 3667341..3667703 | - | 363 | WP_257187794.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KFU78_RS17780 (3667700) | 3667700..3667990 | - | 291 | WP_257187795.1 | DUF1364 domain-containing protein | - |
| KFU78_RS17785 (3667990) | 3667990..3668715 | - | 726 | WP_257187796.1 | DNA-binding protein | - |
| KFU78_RS17790 (3668708) | 3668708..3668878 | - | 171 | WP_257187797.1 | protein NinF | - |
| KFU78_RS17795 (3668875) | 3668875..3669057 | - | 183 | WP_001254251.1 | NinE family protein | - |
| KFU78_RS17800 (3669054) | 3669054..3669581 | - | 528 | WP_113426860.1 | phage N-6-adenine-methyltransferase | - |
| KFU78_RS17805 (3669578) | 3669578..3670018 | - | 441 | WP_000736907.1 | recombination protein NinB | - |
| KFU78_RS17810 (3670092) | 3670092..3670382 | - | 291 | WP_257187798.1 | helix-turn-helix domain-containing protein | - |
| KFU78_RS17815 (3670379) | 3670379..3671224 | - | 846 | WP_077817801.1 | IS21 family transposase ISSme2 | Transposase |
| KFU78_RS17820 (3671227) | 3671227..3672114 | - | 888 | WP_206823154.1 | hypothetical protein | - |
| KFU78_RS17825 (3672126) | 3672126..3672926 | - | 801 | WP_206823150.1 | HNH endonuclease | - |
| KFU78_RS17830 (3672948) | 3672948..3673247 | - | 300 | WP_063101522.1 | CII family transcriptional regulator | - |
| KFU78_RS17835 (3673385) | 3673385..3673585 | - | 201 | WP_000437871.1 | Cro/CI family transcriptional regulator | - |
| KFU78_RS17840 (3673686) | 3673686..3674399 | + | 714 | WP_021568302.1 | LexA family transcriptional regulator | - |
| KFU78_RS17845 (3674750) | 3674750..3675283 | + | 534 | WP_000087627.1 | DUF2335 domain-containing protein | - |
| KFU78_RS17850 (3675739) | 3675739..3676122 | + | 384 | WP_257187799.1 | antitermination protein | - |
| KFU78_RS17855 (3676126) | 3676126..3676350 | + | 225 | WP_001077327.1 | hypothetical protein | - |
| KFU78_RS17860 (3676347) | 3676347..3677039 | + | 693 | WP_250696248.1 | Nmad5 family putative nucleotide modification protein | - |
| KFU78_RS17865 (3677077) | 3677077..3677373 | + | 297 | WP_023145909.1 | hypothetical protein | - |
| KFU78_RS17870 (3677370) | 3677370..3677573 | + | 204 | WP_230894805.1 | hypothetical protein | - |
| KFU78_RS17875 (3677759) | 3677759..3677929 | + | 171 | WP_001183771.1 | hypothetical protein | - |
| KFU78_RS17880 (3678005) | 3678005..3678175 | + | 171 | WP_257187846.1 | hypothetical protein | - |
| KFU78_RS17885 (3678186) | 3678186..3678791 | + | 606 | WP_000031370.1 | ERF family protein | - |
| KFU78_RS17890 (3678791) | 3678791..3679174 | + | 384 | WP_000951325.1 | hypothetical protein | - |
| KFU78_RS17895 (3679198) | 3679198..3679491 | + | 294 | WP_001111315.1 | DUF2856 family protein | - |
| KFU78_RS17900 (3679502) | 3679502..3679666 | + | 165 | WP_001214443.1 | DUF2737 family protein | - |
| KFU78_RS17905 (3679663) | 3679663..3680148 | + | 486 | WP_257187800.1 | hypothetical protein | - |
| KFU78_RS17910 (3680316) | 3680316..3680663 | + | 348 | WP_000390730.1 | helix-turn-helix domain-containing protein | - |
| KFU78_RS17915 (3680546) | 3680546..3681700 | + | 1155 | WP_257187844.1 | hypothetical protein ; Integrase | Integrase |
| KFU78_RS17925 (3681905) | 3681905..3683158 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| KFU78_RS17930 (3683170) | 3683170..3684273 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| KFU78_RS17935 (3684561) | 3684561..3685616 | + | 1056 | WP_257187801.1 | phosphoporin PhoE | - |
| KFU78_RS17940 (3685655) | 3685655..3686056 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3686774) | 3686774..3686854 | - | 81 | NuclAT_12 | - | - |
| - (3686774) | 3686774..3686854 | - | 81 | NuclAT_12 | - | - |
| - (3686774) | 3686774..3686854 | - | 81 | NuclAT_12 | - | - |
| - (3686774) | 3686774..3686854 | - | 81 | NuclAT_12 | - | - |
| KFU78_RS17945 (3686114) | 3686114..3687358 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| KFU78_RS17950 (3687450) | 3687450..3687908 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KFU78_RS17955 (3688169) | 3688169..3689626 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| KFU78_RS17960 (3689683) | 3689683..3690204 | - | 522 | Protein_3513 | peptide chain release factor H | - |
| KFU78_RS17965 (3690203) | 3690203..3690406 | - | 204 | Protein_3514 | RtcB family protein | - |
| KFU78_RS17970 (3690652) | 3690652..3691104 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| KFU78_RS17975 (3691114) | 3691114..3691512 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KFU78_RS17980 (3691515) | 3691515..3691808 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KFU78_RS17985 (3691860) | 3691860..3692915 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KFU78_RS17990 (3692986) | 3692986..3693771 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| KFU78_RS17995 (3693743) | 3693743..3695455 | + | 1713 | Protein_3520 | hypothetical protein | VF |
| KFU78_RS18000 (3695679) | 3695679..3696176 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KFU78_RS18005 (3696352) | 3696352..3697125 | - | 774 | WP_001355630.1 | hypothetical protein | VF |
| KFU78_RS18010 (3697311) | 3697311..3697571 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| KFU78_RS18015 (3697574) | 3697574..3697843 | + | 270 | Protein_3524 | type II toxin-antitoxin system YafQ family toxin | - |
| KFU78_RS18020 (3697999) | 3697999..3698739 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KFU78_RS18025 (3698710) | 3698710..3699477 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KFU78_RS18030 (3699683) | 3699683..3700261 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| KFU78_RS18035 (3700501) | 3700501..3702945 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| KFU78_RS18040 (3702988) | 3702988..3703434 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KFU78_RS18045 (3703615) | 3703615..3704385 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KFU78_RS18050 (3704426) | 3704426..3704839 | - | 414 | Protein_3531 | ISAs1 family transposase | - |
| KFU78_RS18060 (3705626) | 3705626..3706060 | + | 435 | WP_071589460.1 | hypothetical protein | VF |
| KFU78_RS18065 (3706104) | 3706104..3707018 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| KFU78_RS18070 (3707028) | 3707028..3707507 | + | 480 | WP_001236645.1 | protein YkfM | - |
| KFU78_RS18075 (3707644) | 3707644..3708429 | - | 786 | WP_001086141.1 | lipoprotein | - |
| KFU78_RS18085 (3708966) | 3708966..3709697 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KFU78_RS18090 (3709762) | 3709762..3710229 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| KFU78_RS18095 (3710226) | 3710226..3710948 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KFU78_RS18100 (3710982) | 3710982..3711737 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KFU78_RS18105 (3711809) | 3711809..3713167 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| KFU78_RS18110 (3713215) | 3713215..3713811 | - | 597 | Protein_3542 | class I SAM-dependent methyltransferase | - |
| KFU78_RS18115 (3713842) | 3713842..3714642 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KFU78_RS18120 (3714883) | 3714883..3715797 | + | 915 | WP_000648572.1 | hypothetical protein | VF |
| KFU78_RS18125 (3715794) | 3715794..3716597 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| KFU78_RS18160 (3722358) | 3722358..3722933 | - | 576 | WP_001140187.1 | hypothetical protein | VF |
| KFU78_RS18165 (3723121) | 3723121..3724152 | + | 1032 | WP_000594006.1 | hypothetical protein | VF |
| KFU78_RS18170 (3724145) | 3724145..3724798 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| KFU78_RS18175 (3724838) | 3724838..3725653 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| KFU78_RS18180 (3725771) | 3725771..3726175 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| KFU78_RS18185 (3726172) | 3726172..3726879 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| KFU78_RS18190 (3726991) | 3726991..3728709 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|