MGE detailed information
MGE type: Conjugative plasmid MGE length: 88772 bp
Accession: NZ_CP074036 Location: 1..88772 Organism: Escherichia coli strain PI7 Replicon: plasmid pYLPI7c
Accession: NZ_CP074036 Location: 1..88772 Organism: Escherichia coli strain PI7 Replicon: plasmid pYLPI7c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU70_RS24930 (46) | 46..1077 | + | 1032 | WP_000907869.1 | plasmid replication initiator RepA | - |
| KFU70_RS24935 (1987) | 1987..2256 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KFU70_RS24940 (2256) | 2256..2534 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KFU70_RS24945 (2574) | 2574..3422 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| KFU70_RS24950 (3563) | 3563..4012 | + | 450 | WP_001236003.1 | hypothetical protein | - |
| KFU70_RS24955 (4489) | 4489..4755 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| KFU70_RS24960 (4755) | 4755..5249 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| KFU70_RS24965 (5305) | 5305..5907 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| KFU70_RS24970 (6278) | 6278..6982 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KFU70_RS24975 (7046) | 7046..7561 | + | 516 | Protein_9 | ISKra4 family transposase ISKpn19 | Transposase |
| KFU70_RS24980 (7594) | 7594..8022 | + | 429 | Protein_10 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KFU70_RS24985 (8341) | 8341..8997 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| KFU70_RS24990 (9392) | 9392..10407 | + | 1016 | Protein_12 | IS3 family transposase ISEc36 | Transposase |
| KFU70_RS24995 (10450) | 10450..13233 | - | 2784 | Protein_13 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KFU70_RS25000 (13298) | 13298..13591 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| KFU70_RS25005 (13638) | 13638..14513 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| KFU70_RS25010 (14662) | 14662..14829 | + | 168 | Protein_16 | serine hydrolase | - |
| KFU70_RS25015 (15074) | 15074..15376 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| KFU70_RS25020 (15373) | 15373..15999 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| KFU70_RS25025 (16203) | 16203..17474 | - | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| KFU70_RS25030 (17474) | 17474..17911 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KFU70_RS25035 (17908) | 17908..18156 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KFU70_RS25040 (18575) | 18575..19477 | + | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| KFU70_RS25045 (19474) | 19474..19785 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| KFU70_RS25050 (19862) | 19862..20545 | + | 684 | WP_000086153.1 | DNA methylase | - |
| KFU70_RS25055 (20546) | 20546..20767 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| KFU70_RS25060 (20781) | 20781..21215 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| KFU70_RS25065 (21261) | 21261..22037 | + | 777 | WP_001005022.1 | hypothetical protein | - |
| KFU70_RS25070 (22451) | 22451..22876 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KFU70_RS25075 (22923) | 22923..23345 | + | 423 | WP_000271745.1 | DUF1380 family protein | - |
| KFU70_RS25080 (23342) | 23342..23533 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| KFU70_RS25085 (23604) | 23604..23918 | + | 315 | WP_005112260.1 | hypothetical protein | - |
| KFU70_RS25090 (24302) | 24302..24829 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| KFU70_RS25095 (24887) | 24887..25120 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| KFU70_RS25100 (25179) | 25179..27137 | + | 1959 | WP_001145488.1 | ParB/RepB/Spo0J family partition protein | - |
| KFU70_RS25105 (27192) | 27192..27626 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| KFU70_RS25110 (27623) | 27623..28342 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| KFU70_RS25115 (28339) | 28339..28935 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| KFU70_RS25120 (29397) | 29397..29897 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| KFU70_RS25125 (30626) | 30626..31060 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| KFU70_RS25130 (31154) | 31154..31420 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| KFU70_RS25135 (31597) | 31597..31986 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| KFU70_RS25140 (31983) | 31983..32897 | + | 915 | WP_000038348.1 | Recombination-promoting nuclease RpnA | VF |
| KFU70_RS25145 (32959) | 32959..33165 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| KFU70_RS25150 (33196) | 33196..33447 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| KFU70_RS25155 (34027) | 34027..34875 | + | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| KFU70_RS25160 (34962) | 34962..35297 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| KFU70_RS25165 (35531) | 35531..35863 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| KFU70_RS25170 (35874) | 35874..38573 | + | 2700 | WP_001387486.1 | Protein TraI | Relaxase |
| KFU70_RS25175 (38610) | 38610..40901 | - | 2292 | WP_001289278.1 | F-type conjugative transfer protein TrbC | - |
| KFU70_RS25180 (40894) | 40894..41964 | - | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| KFU70_RS25185 (41983) | 41983..43191 | - | 1209 | WP_000121263.1 | hypothetical protein | VF |
| KFU70_RS25190 (43498) | 43498..44583 | - | 1086 | WP_000080543.1 | protein finQ | - |
| - (44792) | 44792..44854 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44792) | 44792..44854 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44792) | 44792..44854 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (44792) | 44792..44854 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| KFU70_RS25195 (44904) | 44904..45056 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| KFU70_RS25200 (45128) | 45128..45379 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KFU70_RS25205 (45679) | 45679..45975 | + | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| KFU70_RS25210 (46040) | 46040..46216 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| KFU70_RS25215 (46399) | 46399..46608 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| KFU70_RS25220 (46706) | 46706..47320 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KFU70_RS25225 (47396) | 47396..49564 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| KFU70_RS25230 (49661) | 49661..50245 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| KFU70_RS25235 (50274) | 50274..51476 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| KFU70_RS25240 (51443) | 51443..52057 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| KFU70_RS25245 (52057) | 52057..55101 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| KFU70_RS25250 (55191) | 55191..55991 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| KFU70_RS25255 (55975) | 55975..56163 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| KFU70_RS25260 (56227) | 56227..56631 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| KFU70_RS25265 (56682) | 56682..57209 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KFU70_RS25270 (57209) | 57209..57913 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| KFU70_RS25275 (57913) | 57913..59202 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| KFU70_RS25280 (59205) | 59205..60188 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| KFU70_RS25285 (60199) | 60199..60891 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| KFU70_RS25290 (60888) | 60888..61235 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KFU70_RS25295 (61253) | 61253..65017 | - | 3765 | WP_001141540.1 | DUF5710 domain-containing protein | - |
| KFU70_RS25300 (65107) | 65107..65658 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| KFU70_RS25305 (65673) | 65673..65963 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| KFU70_RS25310 (65960) | 65960..67108 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| KFU70_RS25315 (67105) | 67105..67923 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| KFU70_RS25320 (67920) | 67920..68378 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KFU70_RS25325 (68773) | 68773..69357 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| KFU70_RS25330 (69417) | 69417..70619 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| KFU70_RS25335 (70705) | 70705..71529 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| KFU70_RS25340 (71680) | 71680..72834 | - | 1155 | WP_001139956.1 | site-specific integrase | - |
| KFU70_RS25345 (72833) | 72833..73117 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| KFU70_RS25350 (73114) | 73114..74448 | - | 1335 | WP_077132313.1 | hypothetical protein | VF |
| KFU70_RS25355 (74448) | 74448..75104 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| KFU70_RS25360 (75089) | 75089..75649 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| KFU70_RS25365 (75659) | 75659..76273 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| KFU70_RS25370 (76290) | 76290..77375 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KFU70_RS25375 (77388) | 77388..78941 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KFU70_RS25380 (78952) | 78952..79404 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| KFU70_RS25385 (79391) | 79391..80686 | - | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| KFU70_RS25390 (80679) | 80679..82361 | - | 1683 | WP_000748144.1 | Outer membrane lipoprotein BfpB | VF |
| KFU70_RS25395 (82375) | 82375..82812 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| KFU70_RS25400 (82812) | 82812..83879 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| KFU70_RS25405 (84926) | 84926..85180 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| KFU70_RS25410 (85352) | 85352..86035 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| KFU70_RS25415 (86289) | 86289..86690 | - | 402 | Protein_97 | transcription termination factor NusG | - |
| KFU70_RS25420 (86801) | 86801..86935 | - | 135 | Protein_98 | transcription termination factor NusG | - |
| KFU70_RS25425 (87377) | 87377..87664 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| KFU70_RS25430 (87702) | 87702..87860 | - | 159 | Protein_100 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|