MGE detailed information
MGE type: Genomic_island MGE length: 9356 bp
Accession: NZ_CP074024 Location: 4189063..4198418 Organism: Escherichia coli strain PK5 Replicon: chromosome
Accession: NZ_CP074024 Location: 4189063..4198418 Organism: Escherichia coli strain PK5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU66_RS20135 (4184224) | 4184224..4185525 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| KFU66_RS20140 (4185641) | 4185641..4185979 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KFU66_RS20145 (4185955) | 4185955..4187652 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| KFU66_RS20150 (4187689) | 4187689..4188264 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| KFU66_RS20160 (4189063) | 4189063..4190601 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KFU66_RS20165 (4190966) | 4190966..4192300 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KFU66_RS20170 (4192380) | 4192380..4194527 | + | 2148 | WP_219371098.1 | lysine decarboxylase CadA | - |
| KFU66_RS20175 (4194586) | 4194586..4196043 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KFU66_RS20180 (4196280) | 4196280..4197797 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KFU66_RS20185 (4197921) | 4197921..4198094 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KFU66_RS20190 (4198122) | 4198122..4198418 | - | 297 | WP_257188436.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KFU66_RS20195 (4198645) | 4198645..4198917 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KFU66_RS20200 (4198929) | 4198929..4199159 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KFU66_RS20205 (4199340) | 4199340..4200971 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| KFU66_RS20210 (4200968) | 4200968..4201687 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.002 |