MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP074019 Location: 278641..287992 Organism: Escherichia coli strain PM22 Replicon: chromosome
Accession: NZ_CP074019 Location: 278641..287992 Organism: Escherichia coli strain PM22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU87_RS01250 (275372) | 275372..276091 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| KFU87_RS01255 (276088) | 276088..277719 | - | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| KFU87_RS01260 (277900) | 277900..278130 | + | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KFU87_RS01265 (278142) | 278142..278414 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KFU87_RS01270 (278641) | 278641..278937 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KFU87_RS01275 (278965) | 278965..279138 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KFU87_RS01280 (279257) | 279257..280774 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KFU87_RS01285 (281011) | 281011..282468 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KFU87_RS01290 (282527) | 282527..284674 | - | 2148 | WP_001100639.1 | lysine decarboxylase CadA | - |
| KFU87_RS01295 (284754) | 284754..286088 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KFU87_RS01300 (286454) | 286454..287992 | - | 1539 | WP_001187171.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KFU87_RS01310 (288791) | 288791..289366 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| KFU87_RS01315 (289403) | 289403..291100 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| KFU87_RS01320 (291076) | 291076..291414 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KFU87_RS01325 (291530) | 291530..292831 | - | 1302 | WP_000961957.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |