MGE detailed information
MGE type: Mobilizable plasmid MGE length: 84156 bp
Accession: NZ_CP074009 Location: 1..84156 Organism: Escherichia coli strain PD4 Replicon: plasmid pYLPD4b
Accession: NZ_CP074009 Location: 1..84156 Organism: Escherichia coli strain PD4 Replicon: plasmid pYLPD4b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU74_RS23685 (KFU74_23535) | 990..1214 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| KFU74_RS23690 (KFU74_23540) | 1211..1948 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KFU74_RS23695 (KFU74_23545) | 2434..2574 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| KFU74_RS23700 (KFU74_23550) | 2580..3284 | - | 705 | Protein_4 | IS6 family transposase IS26 | Transposase |
| KFU74_RS23705 (KFU74_23555) | 3309..3599 | + | 291 | WP_033557184.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| KFU74_RS23710 (KFU74_23560) | 3788..7372 | + | 3585 | Protein_6 | helicase-related protein | - |
| KFU74_RS23715 (KFU74_23565) | 7406..7846 | + | 441 | WP_023352064.1 | hypothetical protein | - |
| KFU74_RS23720 (KFU74_23570) | 7843..8091 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| KFU74_RS23725 (KFU74_23575) | 8130..8851 | - | 722 | Protein_9 | helix-turn-helix domain-containing protein | - |
| KFU74_RS23730 (KFU74_23580) | 9086..9775 | + | 690 | WP_039021624.1 | EAL domain-containing protein | - |
| KFU74_RS23735 (KFU74_23585) | 9829..10473 | - | 645 | WP_001514450.1 | hypothetical protein | - |
| KFU74_RS23740 (KFU74_23590) | 10662..11222 | - | 561 | WP_039021622.1 | Ref family protein | - |
| KFU74_RS23745 (KFU74_23595) | 11470..11679 | - | 210 | WP_077249223.1 | lysogeny establishment protein | - |
| KFU74_RS23750 (KFU74_23600) | 11831..12862 | - | 1032 | WP_029393497.1 | site-specific integrase | - |
| KFU74_RS23755 (KFU74_23605) | 12870..13091 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| KFU74_RS23765 (KFU74_23615) | 14465..14674 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| KFU74_RS23770 (KFU74_23620) | 14785..15636 | + | 852 | WP_000611653.1 | phage repressor protein C1 | - |
| KFU74_RS23775 | 15669..15794 | - | 126 | WP_257233066.1 | hypothetical protein | - |
| KFU74_RS23780 (KFU74_23625) | 15811..16680 | - | 870 | Protein_20 | DUF968 domain-containing protein | - |
| KFU74_RS23785 (KFU74_23630) | 16708..16887 | - | 180 | WP_039022005.1 | hypothetical protein | - |
| KFU74_RS23790 (KFU74_23635) | 16892..17272 | - | 381 | WP_001216044.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KFU74_RS23795 (KFU74_23640) | 17272..17493 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KFU74_RS23800 (KFU74_23645) | 17566..17955 | - | 390 | WP_000506730.1 | S24 family peptidase | - |
| KFU74_RS23805 (KFU74_23650) | 18130..18705 | + | 576 | WP_039022006.1 | hypothetical protein | - |
| KFU74_RS23810 (KFU74_23655) | 18712..18963 | - | 252 | WP_039022007.1 | DNA polymerase III subunit theta | - |
| KFU74_RS23815 (KFU74_23660) | 19753..20019 | - | 267 | WP_223671585.1 | hypothetical protein | - |
| KFU74_RS23820 (KFU74_23665) | 20089..20838 | - | 750 | WP_155057219.1 | hypothetical protein | - |
| KFU74_RS23825 (KFU74_23670) | 20820..21194 | - | 375 | WP_039022008.1 | hypothetical protein | - |
| KFU74_RS23830 (KFU74_23675) | 21261..21425 | - | 165 | WP_152950163.1 | hypothetical protein | - |
| KFU74_RS23835 (KFU74_23680) | 21425..21718 | - | 294 | WP_039022009.1 | hypothetical protein | - |
| KFU74_RS23840 | 22068..22247 | - | 180 | Protein_32 | hypothetical protein | - |
| KFU74_RS23845 (KFU74_23690) | 22240..22821 | - | 582 | WP_039022010.1 | hypothetical protein | - |
| KFU74_RS23850 (KFU74_23695) | 23016..23522 | - | 507 | WP_001379122.1 | hypothetical protein | - |
| KFU74_RS23855 (KFU74_23700) | 23595..24857 | - | 1263 | WP_000107689.1 | hypothetical protein | - |
| KFU74_RS23860 (KFU74_23705) | 25159..25860 | - | 702 | WP_039022011.1 | hypothetical protein | - |
| KFU74_RS23865 (KFU74_23710) | 25857..26534 | - | 678 | WP_065311122.1 | metallophosphoesterase | - |
| KFU74_RS23870 (KFU74_23715) | 26531..26875 | - | 345 | WP_223674116.1 | hypothetical protein | - |
| KFU74_RS23875 (KFU74_23720) | 26923..26985 | - | 63 | Protein_39 | VRR-NUC domain-containing protein | - |
| KFU74_RS23880 (KFU74_23725) | 27060..27317 | + | 258 | Protein_40 | IS3 family transposase ISEc52 | Transposase |
| KFU74_RS23885 (KFU74_23730) | 27330..28481 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| KFU74_RS23890 (KFU74_23735) | 28550..28807 | - | 258 | Protein_42 | IS3 family transposase ISEc52 | Transposase |
| KFU74_RS23895 (KFU74_23740) | 28885..29430 | - | 546 | Protein_43 | recombination-associated protein RdgC | - |
| KFU74_RS23900 (KFU74_23745) | 29423..29707 | - | 285 | WP_001567974.1 | hypothetical protein | - |
| KFU74_RS23905 (KFU74_23750) | 29925..30404 | + | 480 | Protein_45 | hypothetical protein | - |
| KFU74_RS23910 (KFU74_23755) | 30444..30866 | + | 423 | WP_039021693.1 | hypothetical protein | - |
| KFU74_RS23915 (KFU74_23760) | 30892..31032 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| KFU74_RS23920 (KFU74_23765) | 31042..31434 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| KFU74_RS23925 (KFU74_23770) | 31770..32654 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| KFU74_RS23930 (KFU74_23775) | 32945..33754 | + | 810 | WP_039021694.1 | GIY-YIG nuclease family protein | - |
| KFU74_RS23935 (KFU74_23780) | 33923..35119 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| KFU74_RS23940 (KFU74_23785) | 35136..36137 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| KFU74_RS23945 (KFU74_23790) | 36363..38069 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| KFU74_RS23950 (KFU74_23795) | 38129..39718 | + | 1590 | WP_032213770.1 | hypothetical protein | - |
| KFU74_RS23955 (KFU74_23800) | 39728..40543 | + | 816 | WP_000041769.1 | hypothetical protein | - |
| KFU74_RS23960 (KFU74_23805) | 40696..41160 | + | 465 | WP_016240405.1 | hypothetical protein | - |
| KFU74_RS23965 (KFU74_23810) | 41172..41681 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| KFU74_RS23970 (KFU74_23815) | 41841..42953 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| KFU74_RS23975 (KFU74_23820) | 43147..43302 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| KFU74_RS23980 (KFU74_23825) | 43700..43948 | + | 249 | Protein_60 | IS3 family transposase ISEhe3 | Transposase |
| KFU74_RS23985 (KFU74_23830) | 43958..44089 | - | 132 | Protein_61 | IS3 family transposase ISEhe3 | Transposase |
| KFU74_RS23995 (KFU74_23840) | 45520..46231 | + | 712 | Protein_63 | IS3 family transposase | - |
| KFU74_RS24000 (KFU74_23845) | 46629..47326 | + | 698 | WP_101780539.1 | IS1 family transposase IS1R | Transposase |
| KFU74_RS24005 (KFU74_23850) | 47484..48356 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| KFU74_RS24010 (KFU74_23855) | 48532..48996 | - | 465 | WP_001352013.1 | helix-turn-helix transcriptional regulator | - |
| KFU74_RS24020 (KFU74_23865) | 50131..50262 | - | 132 | Protein_68 | IS3 family transposase | - |
| KFU74_RS24025 (KFU74_23870) | 50544..51902 | + | 1359 | WP_063082219.1 | esterase-like activity of phytase family protein | - |
| KFU74_RS24030 | 52024..52101 | - | 78 | Protein_70 | DUF6404 family protein | - |
| KFU74_RS24035 (KFU74_23875) | 52141..53085 | - | 945 | Protein_71 | IS66 family transposase ISEc8 | Transposase |
| KFU74_RS24040 (KFU74_23880) | 53153..53368 | + | 216 | Protein_72 | IS3 family transposase IS911 | Transposase |
| KFU74_RS24050 (KFU74_23890) | 54286..54783 | + | 498 | WP_000148192.1 | hypothetical protein | - |
| KFU74_RS24055 (KFU74_23895) | 54834..55793 | + | 960 | WP_077249230.1 | IS5 family transposase IS903B | Transposase |
| KFU74_RS24060 (KFU74_23900) | 55844..56541 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KFU74_RS24065 (KFU74_23905) | 56476..57210 | - | 735 | WP_065311133.1 | hypothetical protein | Relaxase |
| KFU74_RS24070 (KFU74_23910) | 57221..57943 | - | 723 | WP_050010024.1 | hypothetical protein | - |
| KFU74_RS24075 (KFU74_23915) | 57940..58425 | - | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| KFU74_RS24080 (KFU74_23920) | 59451..59981 | + | 531 | WP_086660617.1 | hypothetical protein | - |
| KFU74_RS24085 (KFU74_23925) | 59984..60322 | + | 339 | WP_223656872.1 | hypothetical protein | - |
| KFU74_RS24095 (KFU74_23935) | 61720..61872 | + | 153 | Protein_83 | IS30 family transposase | - |
| KFU74_RS24105 (KFU74_23945) | 63131..63505 | + | 375 | Protein_85 | IS30 family transposase IS30D | Transposase |
| KFU74_RS24110 (KFU74_23950) | 63515..64412 | + | 898 | Protein_86 | IS3 family transposase ISEc31 | Transposase |
| KFU74_RS24115 (KFU74_23955) | 64478..66031 | + | 1554 | Protein_87 | IS3 family transposase ISKpn38 | Transposase |
| KFU74_RS24120 (KFU74_23960) | 66093..66338 | + | 246 | Protein_88 | IS91 family transposase | - |
| KFU74_RS24125 (KFU74_23965) | 66923..70438 | + | 3516 | WP_072752622.1 | Outer membrane protein IcsA autotransporter | VF |
| KFU74_RS24130 (KFU74_23970) | 70613..70818 | - | 206 | Protein_90 | hypothetical protein | - |
| KFU74_RS24135 | 70817..70930 | + | 114 | Protein_91 | alkaline phosphatase | - |
| KFU74_RS24140 (KFU74_23980) | 71298..71585 | - | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KFU74_RS24145 (KFU74_23985) | 71582..71833 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KFU74_RS24150 (KFU74_23990) | 72415..72807 | + | 393 | Protein_94 | hypothetical protein | - |
| KFU74_RS24155 (KFU74_23995) | 72838..75804 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU74_RS24160 (KFU74_24000) | 75808..76368 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| KFU74_RS24165 (KFU74_24005) | 76544..76894 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| KFU74_RS24170 (KFU74_24010) | 77097..78110 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| KFU74_RS24175 (KFU74_24015) | 78268..78741 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| KFU74_RS24180 (KFU74_24020) | 78872..79660 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| KFU74_RS24185 (KFU74_24025) | 79862..80566 | + | 705 | Protein_101 | IS6 family transposase IS26 | Transposase |
| KFU74_RS24190 (KFU74_24030) | 80619..81374 | + | 756 | Protein_102 | IS110 family transposase IS5075 | Transposase |
| KFU74_RS24195 | 81646..81732 | - | 87 | Protein_103 | Arm DNA-binding domain-containing protein | - |
| KFU74_RS24200 (KFU74_24040) | 82062..82877 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| KFU74_RS24205 (KFU74_24045) | 82964..83206 | + | 243 | Protein_105 | phosphoglucosamine mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|