MGE detailed information
MGE type: Mobilizable plasmid MGE length: 136494 bp
Accession: NZ_CP074002 Location: 1..136494 Organism: Escherichia coli strain PM4 Replicon: plasmid pYLPM4a
Accession: NZ_CP074002 Location: 1..136494 Organism: Escherichia coli strain PM4 Replicon: plasmid pYLPM4a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU80_RS22625 (KFU80_22415) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| KFU80_RS22630 (KFU80_22420) | 1261..2466 | + | 1206 | WP_039022244.1 | Plasmid partition protein A | VF |
| KFU80_RS22635 (KFU80_22425) | 2463..3428 | + | 966 | WP_023338075.1 | ParB family protein | - |
| KFU80_RS22640 (KFU80_22430) | 3693..5399 | + | 1707 | WP_039022245.1 | hypothetical protein | - |
| KFU80_RS22645 (KFU80_22435) | 5460..7049 | + | 1590 | WP_039022246.1 | hypothetical protein | - |
| KFU80_RS22650 (KFU80_22440) | 7059..7874 | + | 816 | WP_039022247.1 | hypothetical protein | - |
| KFU80_RS22655 (KFU80_22445) | 7910..8491 | + | 582 | WP_029396071.1 | hypothetical protein | - |
| KFU80_RS22660 (KFU80_22450) | 8503..9012 | + | 510 | WP_039022248.1 | hypothetical protein | - |
| KFU80_RS22670 (KFU80_22460) | 10533..10919 | + | 387 | WP_001039463.1 | plasmid stabilization protein StbA | - |
| KFU80_RS22675 (KFU80_22465) | 10928..11119 | + | 192 | WP_000861580.1 | hypothetical protein | - |
| KFU80_RS22680 (KFU80_22470) | 11197..13338 | + | 2142 | WP_257187771.1 | AAA family ATPase | - |
| KFU80_RS22685 (KFU80_22475) | 13278..14486 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| KFU80_RS22690 (KFU80_22480) | 14461..15474 | + | 1014 | WP_257187772.1 | ATP-binding domain-containing protein | - |
| KFU80_RS22695 (KFU80_22485) | 15471..16895 | + | 1425 | WP_073503524.1 | tetratricopeptide repeat protein | - |
| KFU80_RS22700 (KFU80_22490) | 17082..18050 | + | 969 | WP_257171035.1 | IS5 family transposase IS903B | Transposase |
| KFU80_RS22705 (KFU80_22500) | 18583..19287 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KFU80_RS22710 (KFU80_22505) | 19352..19555 | - | 204 | Protein_17 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| KFU80_RS22715 (KFU80_22510) | 19694..20461 | - | 768 | WP_032319018.1 | thiosulfate reductase cytochrome B subunit | - |
| KFU80_RS22720 (KFU80_22515) | 20458..21036 | - | 579 | WP_016153548.1 | thiosulfate reductase electron transport protein PhsB | - |
| KFU80_RS22725 (KFU80_22520) | 21051..23324 | - | 2274 | WP_032319017.1 | thiosulfate reductase PhsA | - |
| KFU80_RS22730 (KFU80_22525) | 23472..24176 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KFU80_RS22735 (KFU80_22530) | 24528..26981 | + | 2454 | WP_074149665.1 | poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA | - |
| KFU80_RS22740 (KFU80_22535) | 26991..29012 | + | 2022 | WP_034167706.1 | hypothetical protein | VF |
| KFU80_RS22745 (KFU80_22540) | 29009..30343 | + | 1335 | WP_034167705.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| KFU80_RS22750 (KFU80_22545) | 30340..30846 | + | 507 | WP_034167704.1 | Biofilm PGA synthesis protein PgaD | VF |
| KFU80_RS22755 (KFU80_22550) | 30927..31022 | + | 96 | Protein_26 | (4Fe-4S)-binding protein | - |
| KFU80_RS22760 (KFU80_22555) | 31086..31790 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KFU80_RS22765 (KFU80_22560) | 31837..34803 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU80_RS22770 (KFU80_22565) | 34807..35367 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| KFU80_RS22775 (KFU80_22570) | 35543..35893 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| KFU80_RS22780 (KFU80_22575) | 36096..37109 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| KFU80_RS22785 (KFU80_22580) | 37367..37453 | + | 87 | WP_012386611.1 | tetracycline resistance determinant leader peptide | - |
| KFU80_RS22790 (KFU80_22585) | 37469..39388 | + | 1920 | WP_010729924.1 | Peptide chain release factor 3 | VF |
| KFU80_RS22795 (KFU80_22590) | 39507..39674 | + | 168 | WP_047655494.1 | cysteine-rich KTR domain-containing protein | - |
| KFU80_RS22800 (KFU80_22595) | 39734..39796 | - | 63 | Protein_35 | XRE family transcriptional regulator | - |
| KFU80_RS22805 (KFU80_22605) | 40312..41325 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| KFU80_RS22810 (KFU80_22610) | 41481..41954 | + | 474 | WP_032490158.1 | hypothetical protein | ARG |
| KFU80_RS22815 (KFU80_22615) | 42119..42985 | + | 867 | WP_001931474.1 | Beta-lactamase PSE-1 | ARG |
| KFU80_RS22820 (KFU80_22620) | 43103..43941 | + | 839 | Protein_39 | Streptomycin 3''-adenylyltransferase | ARG |
| KFU80_RS22825 (KFU80_22625) | 44156..45415 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| KFU80_RS22830 (KFU80_22630) | 45508..46346 | + | 839 | Protein_41 | Streptomycin 3''-adenylyltransferase | ARG |
| KFU80_RS22835 (KFU80_22635) | 46469..46801 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| KFU80_RS22840 (KFU80_22640) | 47048..47680 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| KFU80_RS22845 (KFU80_22645) | 47703..47978 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| KFU80_RS22850 (KFU80_22650) | 47981..48772 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| KFU80_RS22855 (KFU80_22655) | 49241..49486 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| KFU80_RS22860 (KFU80_22660) | 49524..50387 | - | 864 | WP_054377175.1 | SDR family oxidoreductase | - |
| KFU80_RS22865 (KFU80_22665) | 50533..51762 | - | 1230 | WP_032492336.1 | hypothetical protein | ARG |
| KFU80_RS22870 (KFU80_22670) | 52105..52809 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KFU80_RS22875 (KFU80_22675) | 52834..53538 | + | 705 | WP_257187773.1 | copper homeostasis membrane protein CopD | - |
| KFU80_RS22880 (KFU80_22680) | 53710..54918 | + | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| KFU80_RS22885 (KFU80_22685) | 54934..55053 | - | 120 | Protein_52 | LysR family transcriptional regulator | - |
| KFU80_RS22890 (KFU80_22690) | 55284..56489 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| KFU80_RS22895 (KFU80_22695) | 56933..57253 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| KFU80_RS22900 (KFU80_22700) | 57246..57632 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| KFU80_RS22905 (KFU80_22705) | 57640..58326 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| KFU80_RS22910 (KFU80_22710) | 58304..58927 | - | 624 | WP_000088605.1 | hypothetical protein | VF |
| KFU80_RS22915 (KFU80_22715) | 59009..60214 | + | 1206 | WP_001089068.1 | Multidrug resistance protein MdtG | ARG |
| KFU80_RS22920 (KFU80_22720) | 60327..60920 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| KFU80_RS22925 (KFU80_22725) | 61008..61424 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| KFU80_RS22930 (KFU80_22730) | 61434..62639 | - | 1206 | WP_257171034.1 | IS4 family transposase IS10R | Transposase |
| KFU80_RS22935 (KFU80_22735) | 62663..63351 | + | 689 | Protein_62 | IS3-like element ISEc52 family transposase | - |
| KFU80_RS22940 (KFU80_22740) | 64024..65532 | + | 1509 | WP_048322219.1 | group II intron reverse transcriptase/maturase | - |
| KFU80_RS22945 (KFU80_22745) | 65613..66102 | + | 490 | Protein_64 | IS3 family transposase | - |
| KFU80_RS22950 (KFU80_22750) | 66300..67148 | + | 849 | WP_257171033.1 | alpha/beta fold hydrolase | - |
| KFU80_RS22955 (KFU80_22755) | 67306..67695 | - | 390 | WP_064559912.1 | hypothetical protein | - |
| KFU80_RS22960 (KFU80_22760) | 67822..68094 | - | 273 | WP_064559914.1 | AbiV family abortive infection protein | - |
| KFU80_RS22965 (KFU80_22765) | 68792..69913 | + | 1122 | WP_064559916.1 | Chromosome partition protein Smc | Relaxase |
| KFU80_RS22970 (KFU80_22770) | 69910..70140 | - | 231 | WP_064559918.1 | hypothetical protein | - |
| KFU80_RS22975 (KFU80_22775) | 70372..70686 | + | 315 | WP_257171032.1 | hypothetical protein | - |
| KFU80_RS22980 (KFU80_22780) | 70936..71937 | + | 1002 | WP_198550659.1 | replication initiation protein | - |
| KFU80_RS22985 (KFU80_22790) | 72354..72932 | + | 579 | WP_074410601.1 | hypothetical protein | - |
| KFU80_RS22990 (KFU80_22795) | 72904..73740 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| KFU80_RS22995 (KFU80_22800) | 73740..74543 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| KFU80_RS23000 (KFU80_22805) | 74650..75108 | - | 459 | Protein_75 | IS3 family transposase IS1133 | Transposase |
| KFU80_RS23005 (KFU80_22810) | 75189..76697 | - | 1509 | WP_048322219.1 | group II intron reverse transcriptase/maturase | - |
| KFU80_RS23010 (KFU80_22815) | 77370..78049 | - | 680 | Protein_77 | IS3 family transposase IS1133 | Transposase |
| KFU80_RS23015 (KFU80_22820) | 78114..78728 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KFU80_RS23020 (KFU80_22825) | 78854..79216 | + | 363 | Protein_79 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| KFU80_RS23025 (KFU80_22830) | 79595..80014 | - | 420 | WP_061586529.1 | hypothetical protein | - |
| KFU80_RS23030 (KFU80_22835) | 80177..80449 | - | 273 | WP_061586528.1 | hypothetical protein | - |
| KFU80_RS23035 (KFU80_22840) | 80780..82396 | - | 1617 | WP_157918524.1 | ABC-F type ribosomal protection protein | - |
| KFU80_RS23040 (KFU80_22845) | 82488..83363 | - | 876 | WP_061586525.1 | SDR family oxidoreductase | - |
| KFU80_RS23045 (KFU80_22850) | 83450..84226 | - | 777 | WP_227457005.1 | aminoglycoside phosphotransferase family protein | - |
| KFU80_RS23050 (KFU80_22855) | 84265..84645 | - | 381 | WP_000131935.1 | bleomycin binding protein BLMT | - |
| KFU80_RS23055 (KFU80_22860) | 84666..85460 | - | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| KFU80_RS23060 (KFU80_22865) | 85489..86919 | - | 1431 | Protein_87 | IS4 family transposase IS50R | Transposase |
| KFU80_RS23065 (KFU80_22870) | 87014..88813 | + | 1800 | Protein_88 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| KFU80_RS23070 (KFU80_22875) | 89154..89447 | + | 294 | WP_223429961.1 | biofilm development regulator YmgB/AriR family protein | - |
| KFU80_RS23075 | 89572..89708 | - | 137 | Protein_90 | IS5 family transposase IS903 | Transposase |
| KFU80_RS23080 | 89785..89919 | - | 135 | WP_257187774.1 | hypothetical protein | - |
| KFU80_RS23085 (KFU80_22880) | 89975..90253 | - | 279 | WP_244578848.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KFU80_RS23090 (KFU80_22885) | 90253..90522 | - | 270 | WP_000079938.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KFU80_RS23095 (KFU80_22890) | 90595..90735 | - | 141 | WP_160784086.1 | hypothetical protein | - |
| KFU80_RS23100 (KFU80_22895) | 91234..91591 | - | 358 | Protein_95 | IS1 family transposase | - |
| KFU80_RS23105 (KFU80_22900) | 91783..92760 | + | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| KFU80_RS23110 (KFU80_22905) | 92808..93167 | - | 360 | WP_170877903.1 | hypothetical protein | - |
| KFU80_RS23115 (KFU80_22910) | 93189..94309 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| KFU80_RS23120 (KFU80_22915) | 94427..94684 | + | 258 | Protein_99 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KFU80_RS23125 (KFU80_22920) | 94730..97312 | - | 2583 | WP_000449742.1 | nuclease domain-containing protein | - |
| KFU80_RS23130 (KFU80_22925) | 97315..99486 | - | 2172 | WP_257171036.1 | AAA family ATPase | - |
| KFU80_RS23135 (KFU80_22930) | 99483..100691 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| KFU80_RS23140 (KFU80_22935) | 101297..101521 | - | 225 | Protein_103 | hypothetical protein | - |
| KFU80_RS23145 (KFU80_22940) | 101660..102682 | + | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| KFU80_RS23150 (KFU80_22945) | 102679..103461 | + | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| KFU80_RS23155 (KFU80_22950) | 103765..104052 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFU80_RS23160 (KFU80_22955) | 104052..104291 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFU80_RS23165 | 104316..104426 | + | 111 | Protein_108 | hypothetical protein | - |
| KFU80_RS23170 (KFU80_22960) | 104633..104782 | + | 150 | WP_000550473.1 | hypothetical protein | - |
| KFU80_RS23175 (KFU80_22965) | 104826..105899 | + | 1074 | WP_000557466.1 | hypothetical protein | - |
| KFU80_RS23180 (KFU80_22970) | 106163..106867 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KFU80_RS23185 (KFU80_22975) | 106919..107191 | - | 273 | Protein_112 | copper resistance inner membrane protein PcoD | - |
| KFU80_RS23190 (KFU80_22980) | 107196..107576 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| KFU80_RS23195 (KFU80_22985) | 107616..108506 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| KFU80_RS23200 (KFU80_22990) | 108512..110329 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| KFU80_RS23205 (KFU80_22995) | 110564..111013 | + | 450 | WP_001023231.1 | hypothetical protein | - |
| KFU80_RS23210 (KFU80_23000) | 111288..112025 | + | 738 | WP_000287499.1 | hypothetical protein | VF |
| KFU80_RS23215 (KFU80_23005) | 112059..112256 | - | 198 | WP_000843496.1 | DUF2933 domain-containing protein | - |
| KFU80_RS23220 (KFU80_23010) | 112297..114774 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| KFU80_RS23225 (KFU80_23015) | 114871..115311 | - | 441 | WP_000758221.1 | DUF411 domain-containing protein | - |
| KFU80_RS23230 (KFU80_23020) | 115398..118544 | - | 3147 | WP_000574035.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| KFU80_RS23235 (KFU80_23025) | 118555..119847 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| KFU80_RS23240 (KFU80_23030) | 119961..120314 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| KFU80_RS23245 (KFU80_23035) | 120342..121727 | - | 1386 | WP_000475512.1 | hypothetical protein | VF |
| KFU80_RS23250 (KFU80_23040) | 121917..122597 | + | 681 | WP_000697969.1 | Regulator of RpoS | VF |
| KFU80_RS23255 (KFU80_23045) | 122590..124065 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| KFU80_RS23260 (KFU80_23050) | 124316..124747 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| KFU80_RS23265 (KFU80_23055) | 124891..125241 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| KFU80_RS23270 (KFU80_23060) | 125629..126537 | - | 909 | Protein_129 | HNH endonuclease | - |
| KFU80_RS23275 (KFU80_23065) | 127174..128148 | + | 975 | WP_001148756.1 | sensor domain-containing diguanylate cyclase | - |
| KFU80_RS23280 (KFU80_23070) | 128716..129066 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| KFU80_RS23285 (KFU80_23075) | 129117..129860 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| KFU80_RS23290 (KFU80_23080) | 129857..130633 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| KFU80_RS23295 (KFU80_23085) | 130691..130948 | - | 258 | WP_000764641.1 | hypothetical protein | - |
| KFU80_RS23300 (KFU80_23090) | 131077..131181 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| KFU80_RS23305 (KFU80_23095) | 131411..131599 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| KFU80_RS23310 (KFU80_23100) | 131609..132808 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KFU80_RS23315 (KFU80_23105) | 132979..133314 | - | 336 | Protein_138 | IS3 family transposase | - |
| KFU80_RS23320 (KFU80_23110) | 133404..134524 | + | 1121 | WP_094314952.1 | IS3 family transposase ISRaq1 | Transposase |
| KFU80_RS23325 (KFU80_23115) | 134534..135700 | - | 1167 | WP_073503525.1 | IS30 family transposase IS30D | Transposase |
| KFU80_RS23330 (KFU80_23120) | 135768..136025 | - | 258 | Protein_141 | IS3 family transposase ISEc52 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|