MGE detailed information
MGE type: Prophage MGE length: 132945 bp
Accession: NZ_CP073883 Location: 434607..567551 Organism: Staphylococcus epidermidis strain B1287175 Replicon: chromosome
Accession: NZ_CP073883 Location: 434607..567551 Organism: Staphylococcus epidermidis strain B1287175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFV54_RS02215 (KFV54_02215) | 430009..430470 | + | 462 | WP_002469001.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| KFV54_RS02220 (KFV54_02220) | 430451..431113 | + | 663 | WP_002468996.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| KFV54_RS02225 (KFV54_02225) | 431086..431547 | + | 462 | WP_001829994.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| KFV54_RS02230 (KFV54_02230) | 431544..432566 | + | 1023 | WP_002469005.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| KFV54_RS02235 (KFV54_02235) | 432649..434265 | - | 1617 | WP_002469004.1 | AAA family ATPase | - |
| KFV54_RS02240 (KFV54_02240) | 434607..436541 | - | 1935 | WP_002468991.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| KFV54_RS02245 (KFV54_02245) | 436888..437523 | + | 636 | WP_002468998.1 | redox-sensing transcriptional repressor Rex | - |
| KFV54_RS02250 (KFV54_02250) | 437633..438774 | + | 1142 | WP_089418807.1 | IS3 family transposase ISSau4 | Transposase |
| KFV54_RS02255 (KFV54_02255) | 438939..439220 | + | 282 | WP_002497516.1 | PH domain-containing protein | - |
| KFV54_RS02260 (KFV54_02260) | 439307..439606 | + | 300 | Protein_437 | YeeE/YedE thiosulfate transporter family protein | - |
| KFV54_RS02265 (KFV54_02265) | 439924..440529 | + | 606 | WP_063278548.1 | LPXTG cell wall anchor domain-containing protein | - |
| KFV54_RS02270 (KFV54_02270) | 440672..442318 | + | 1647 | WP_002504808.1 | hypothetical protein | - |
| KFV54_RS02275 (KFV54_02275) | 442457..442633 | + | 177 | WP_002504809.1 | hypothetical protein | - |
| KFV54_RS02280 (KFV54_02280) | 443013..443213 | + | 201 | WP_002504810.1 | hypothetical protein | - |
| KFV54_RS02285 (KFV54_02285) | 443289..444791 | - | 1503 | WP_002504811.1 | N-acetylmuramoyl-L-alanine amidase | - |
| KFV54_RS02290 (KFV54_02290) | 444868..447261 | - | 2394 | WP_002504812.1 | SGNH/GDSL hydrolase family protein | - |
| KFV54_RS02295 (KFV54_02295) | 447313..447642 | - | 330 | WP_002504813.1 | phage holin | - |
| KFV54_RS02300 (KFV54_02300) | 447664..448176 | - | 513 | WP_002504814.1 | hypothetical protein | - |
| KFV54_RS02305 (KFV54_02305) | 448158..448619 | - | 462 | WP_010959248.1 | hypothetical protein | - |
| KFV54_RS02310 (KFV54_02310) | 448666..451335 | - | 2670 | WP_012085824.1 | tail fiber domain-containing protein | - |
| KFV54_RS02315 (KFV54_02315) | 451377..451544 | - | 168 | WP_002504817.1 | hypothetical protein | - |
| KFV54_RS02320 (KFV54_02320) | 451537..451911 | - | 375 | WP_002504818.1 | hypothetical protein | - |
| KFV54_RS02325 (KFV54_02325) | 451914..459959 | - | 8046 | WP_012085822.1 | hypothetical protein | - |
| KFV54_RS02330 (KFV54_02330) | 460020..462101 | - | 2082 | WP_002504820.1 | hypothetical protein | - |
| KFV54_RS02335 (KFV54_02335) | 462123..470396 | - | 8274 | WP_012085820.1 | phage tail tape measure protein | - |
| KFV54_RS02340 (KFV54_02340) | 470493..471509 | - | 1017 | WP_010959245.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KFV54_RS02345 (KFV54_02345) | 471525..471998 | - | 474 | WP_002504823.1 | hypothetical protein | - |
| KFV54_RS02350 (KFV54_02350) | 471998..472555 | - | 558 | WP_000700062.1 | hypothetical protein | - |
| KFV54_RS02355 (KFV54_02355) | 472639..473430 | - | 792 | WP_002504825.1 | hypothetical protein | - |
| KFV54_RS02360 (KFV54_02360) | 473469..474341 | - | 873 | WP_000391855.1 | hypothetical protein | - |
| KFV54_RS02365 (KFV54_02365) | 474347..474868 | - | 522 | WP_001177112.1 | hypothetical protein | - |
| KFV54_RS02370 (KFV54_02370) | 474858..475523 | - | 666 | WP_000384369.1 | hypothetical protein | - |
| KFV54_RS02375 (KFV54_02375) | 475527..475808 | - | 282 | WP_227489983.1 | hypothetical protein | - |
| KFV54_RS02380 (KFV54_02380) | 475834..476268 | - | 435 | WP_000134539.1 | hypothetical protein | - |
| KFV54_RS02385 (KFV54_02385) | 476286..476837 | - | 552 | WP_000985467.1 | hypothetical protein | - |
| KFV54_RS02390 (KFV54_02390) | 476912..477913 | - | 1002 | WP_002504827.1 | hypothetical protein | - |
| KFV54_RS02395 (KFV54_02395) | 477952..478392 | - | 441 | WP_002504828.1 | hypothetical protein | - |
| KFV54_RS02400 (KFV54_02400) | 478420..479799 | - | 1380 | WP_002504829.1 | hypothetical protein | - |
| KFV54_RS02405 (KFV54_02405) | 479792..481354 | - | 1563 | WP_000389594.1 | hypothetical protein | - |
| KFV54_RS02410 (KFV54_02410) | 481372..483171 | - | 1800 | WP_002504830.1 | terminase family protein | - |
| KFV54_RS02415 (KFV54_02415) | 483164..484048 | - | 885 | WP_001007716.1 | hypothetical protein | - |
| KFV54_RS02420 (KFV54_02420) | 485743..486927 | - | 1185 | WP_002504831.1 | hypothetical protein | - |
| KFV54_RS02425 (KFV54_02425) | 486936..487121 | - | 186 | WP_000057341.1 | YonK family protein | - |
| KFV54_RS02430 (KFV54_02430) | 487147..487476 | - | 330 | WP_002504832.1 | HU family DNA-binding protein | - |
| KFV54_RS02435 (KFV54_02435) | 487736..489232 | - | 1497 | WP_002504833.1 | hypothetical protein | - |
| KFV54_RS02440 (KFV54_02440) | 489368..490897 | + | 1530 | WP_225973550.1 | AAA family ATPase | - |
| KFV54_RS02445 (KFV54_02445) | 491106..492284 | + | 1179 | WP_104832459.1 | IS110 family transposase ISSep2 | Transposase |
| KFV54_RS02450 (KFV54_02450) | 492377..493213 | + | 837 | WP_225973555.1 | ATP-dependent RecD-like DNA helicase | - |
| KFV54_RS02455 (KFV54_02455) | 493249..494124 | + | 876 | WP_002504834.1 | hypothetical protein | - |
| KFV54_RS02460 (KFV54_02460) | 496505..496666 | + | 162 | WP_010959243.1 | hypothetical protein | - |
| KFV54_RS02465 (KFV54_02465) | 498019..498303 | + | 285 | WP_002504554.1 | hypothetical protein | - |
| KFV54_RS02470 (KFV54_02470) | 498483..498698 | + | 216 | WP_002504552.1 | hypothetical protein | - |
| KFV54_RS02475 (KFV54_02475) | 498773..499033 | + | 261 | WP_010959242.1 | hypothetical protein | - |
| KFV54_RS02480 (KFV54_02480) | 499170..499559 | + | 390 | WP_010959241.1 | hypothetical protein | - |
| KFV54_RS02485 (KFV54_02485) | 499712..500371 | + | 660 | WP_002504625.1 | antirestriction protein ArdA | - |
| KFV54_RS02490 (KFV54_02490) | 500415..500738 | + | 324 | WP_002504624.1 | hypothetical protein | - |
| KFV54_RS02495 (KFV54_02495) | 500831..501094 | + | 264 | WP_002504623.1 | hypothetical protein | - |
| KFV54_RS02500 (KFV54_02500) | 501123..501803 | + | 681 | WP_010959240.1 | hypothetical protein | - |
| KFV54_RS02505 (KFV54_02505) | 501919..502371 | + | 453 | WP_010959239.1 | hypothetical protein | - |
| KFV54_RS02510 (KFV54_02510) | 502371..502892 | + | 522 | WP_063278515.1 | hypothetical protein | - |
| KFV54_RS02515 (KFV54_02515) | 502970..503398 | + | 429 | WP_002504685.1 | hypothetical protein | - |
| KFV54_RS02520 (KFV54_02520) | 504082..505125 | + | 1044 | WP_002504683.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KFV54_RS02525 (KFV54_02525) | 505436..506716 | + | 1281 | WP_002504682.1 | DNA sulfur modification protein DndB | - |
| KFV54_RS02530 (KFV54_02530) | 506728..507732 | + | 1005 | WP_002504681.1 | hypothetical protein | - |
| KFV54_RS02535 (KFV54_02535) | 507892..508140 | + | 249 | WP_002504680.1 | hypothetical protein | - |
| KFV54_RS02540 (KFV54_02540) | 508156..508644 | + | 489 | WP_002504679.1 | hypothetical protein | - |
| KFV54_RS02545 (KFV54_02545) | 508662..509342 | + | 681 | WP_000668931.1 | hypothetical protein | - |
| KFV54_RS02550 (KFV54_02550) | 509386..510345 | + | 960 | WP_000852323.1 | hypothetical protein | - |
| KFV54_RS02555 (KFV54_02555) | 510469..511437 | + | 969 | WP_002504678.1 | ATP-binding protein | - |
| KFV54_RS02560 (KFV54_02560) | 511514..512032 | + | 519 | WP_002504677.1 | hypothetical protein | - |
| KFV54_RS02565 (KFV54_02565) | 512054..513586 | + | 1533 | WP_002504676.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| KFV54_RS02570 (KFV54_02570) | 513603..514715 | + | 1113 | WP_002504675.1 | hypothetical protein | - |
| KFV54_RS02575 (KFV54_02575) | 514718..516484 | + | 1767 | WP_010959235.1 | single-stranded DNA-binding protein | - |
| KFV54_RS02580 (KFV54_02580) | 516677..517414 | + | 738 | WP_010959234.1 | MBL fold metallo-hydrolase | - |
| KFV54_RS02585 (KFV54_02585) | 517712..518386 | - | 675 | WP_001106019.1 | IS6 family transposase IS257R2 | Transposase |
| KFV54_RS02590 (KFV54_02590) | 518500..519456 | + | 957 | WP_000282655.1 | thymidylate synthase | - |
| KFV54_RS02595 (KFV54_02595) | 519498..519983 | + | 486 | WP_000175735.1 | trimethoprim-resistant dihydrofolate reductase DfrS1 | - |
| KFV54_RS02600 (KFV54_02600) | 520117..521289 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| KFV54_RS02605 (KFV54_02605) | 521346..521738 | + | 393 | WP_000393259.1 | GNAT family N-acetyltransferase | - |
| KFV54_RS02610 (KFV54_02610) | 521739..523178 | + | 1440 | WP_001028141.1 | Bifunctional AAC/APH | ARG |
| KFV54_RS02615 (KFV54_02615) | 523308..524480 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| KFV54_RS02620 (KFV54_02620) | 524543..524965 | + | 423 | Protein_509 | DegV family protein | - |
| KFV54_RS02625 (KFV54_02625) | 525021..525695 | - | 675 | WP_001106022.1 | IS6 family transposase IS257R1 | Transposase |
| KFV54_RS02630 (KFV54_02630) | 525739..526785 | + | 1047 | WP_002504581.1 | hypothetical protein | - |
| KFV54_RS02635 (KFV54_02635) | 526796..526993 | + | 198 | WP_002504580.1 | hypothetical protein | - |
| KFV54_RS02640 (KFV54_02640) | 527006..527281 | + | 276 | WP_002504579.1 | hypothetical protein | - |
| KFV54_RS02645 (KFV54_02645) | 527573..527881 | + | 309 | WP_002504577.1 | hypothetical protein | - |
| KFV54_RS02650 (KFV54_02650) | 527884..528147 | + | 264 | WP_000312937.1 | hypothetical protein | - |
| KFV54_RS02655 (KFV54_02655) | 528187..528597 | + | 411 | WP_002504576.1 | YopX family protein | - |
| KFV54_RS02660 (KFV54_02660) | 528594..528941 | + | 348 | WP_000862563.1 | thermonuclease family protein | - |
| KFV54_RS02665 (KFV54_02665) | 528947..529171 | + | 225 | WP_000359469.1 | hypothetical protein | - |
| KFV54_RS02670 (KFV54_02670) | 529193..529432 | + | 240 | WP_002504575.1 | hypothetical protein | - |
| KFV54_RS02675 (KFV54_02675) | 529455..529730 | + | 276 | WP_002504574.1 | hypothetical protein | - |
| KFV54_RS02680 (KFV54_02680) | 529752..530018 | + | 267 | WP_002504573.1 | hypothetical protein | - |
| KFV54_RS02685 (KFV54_02685) | 530023..530226 | + | 204 | WP_002504572.1 | hypothetical protein | - |
| KFV54_RS02690 (KFV54_02690) | 530233..530421 | + | 189 | WP_002504571.1 | Lar family restriction alleviation protein | - |
| KFV54_RS02695 (KFV54_02695) | 530423..530905 | + | 483 | WP_002504570.1 | hypothetical protein | - |
| KFV54_RS02700 (KFV54_02700) | 530921..531100 | + | 180 | WP_002504569.1 | hypothetical protein | - |
| KFV54_RS02705 (KFV54_02705) | 531085..531270 | + | 186 | WP_001187008.1 | hypothetical protein | - |
| KFV54_RS02710 (KFV54_02710) | 531286..531570 | + | 285 | WP_002504568.1 | hypothetical protein | - |
| KFV54_RS02715 (KFV54_02715) | 531567..531722 | + | 156 | WP_002504567.1 | transcriptional activator RinB | - |
| KFV54_RS02720 (KFV54_02720) | 531748..532020 | + | 273 | WP_002504566.1 | hypothetical protein | - |
| KFV54_RS02725 (KFV54_02725) | 532036..532578 | + | 543 | WP_002504565.1 | hypothetical protein | - |
| KFV54_RS02730 (KFV54_02730) | 532571..532747 | + | 177 | WP_002504564.1 | hypothetical protein | - |
| KFV54_RS02735 (KFV54_02735) | 532767..532988 | + | 222 | WP_002504563.1 | hypothetical protein | - |
| KFV54_RS02740 (KFV54_02740) | 532988..533713 | + | 726 | WP_010959229.1 | metallophosphoesterase | - |
| KFV54_RS02745 (KFV54_02745) | 533706..534023 | + | 318 | WP_002504561.1 | hypothetical protein | - |
| KFV54_RS02750 (KFV54_02750) | 534023..534673 | + | 651 | WP_002504560.1 | hypothetical protein | - |
| KFV54_RS02755 (KFV54_02755) | 534673..535191 | + | 519 | WP_002504559.1 | metallophosphoesterase | - |
| KFV54_RS02760 (KFV54_02760) | 535354..535584 | + | 231 | WP_002504558.1 | addiction module antitoxin | Antitoxin Detail |
| KFV54_RS02765 (KFV54_02765) | 535584..535979 | + | 396 | WP_002504557.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KFV54_RS02770 (KFV54_02770) | 536282..536473 | + | 192 | WP_002504556.1 | hypothetical protein | - |
| KFV54_RS02775 (KFV54_02775) | 536457..536726 | + | 270 | WP_000755772.1 | hypothetical protein | - |
| KFV54_RS02780 (KFV54_02780) | 536783..537277 | + | 495 | WP_010959224.1 | hypothetical protein | - |
| KFV54_RS02785 (KFV54_02785) | 537281..538081 | + | 801 | WP_000686449.1 | metallophosphoesterase | - |
| KFV54_RS02790 (KFV54_02790) | 538190..538912 | + | 723 | WP_002504538.1 | hypothetical protein | - |
| KFV54_RS02795 (KFV54_02795) | 539018..539659 | + | 642 | WP_002504537.1 | hypothetical protein | - |
| KFV54_RS13440 | 539690..539824 | - | 135 | WP_002504536.1 | hypothetical protein | - |
| KFV54_RS02800 (KFV54_02800) | 539907..540311 | - | 405 | WP_002504535.1 | YolD-like family protein | - |
| KFV54_RS02805 (KFV54_02805) | 540664..541224 | - | 561 | WP_002504534.1 | hypothetical protein | - |
| KFV54_RS02810 (KFV54_02810) | 541390..541764 | + | 375 | WP_002504533.1 | hypothetical protein | - |
| KFV54_RS02815 (KFV54_02815) | 541777..543225 | + | 1449 | WP_010959223.1 | PHP domain-containing protein | - |
| KFV54_RS02820 (KFV54_02820) | 543688..546174 | + | 2487 | WP_002504531.1 | hypothetical protein | - |
| KFV54_RS02825 (KFV54_02825) | 546304..546666 | + | 363 | WP_016187713.1 | hypothetical protein | - |
| KFV54_RS02830 (KFV54_02830) | 546804..547118 | + | 315 | WP_002504529.1 | hypothetical protein | - |
| KFV54_RS02835 (KFV54_02835) | 547128..548426 | + | 1299 | WP_010959221.1 | ATP-dependent DNA ligase | - |
| KFV54_RS02840 (KFV54_02840) | 548514..548903 | + | 390 | WP_002504527.1 | hypothetical protein | - |
| KFV54_RS02845 (KFV54_02845) | 549017..549190 | + | 174 | WP_000119719.1 | hypothetical protein | - |
| KFV54_RS02850 (KFV54_02850) | 549202..549468 | + | 267 | WP_002504526.1 | hypothetical protein | - |
| KFV54_RS02855 (KFV54_02855) | 549461..549748 | + | 288 | WP_219045179.1 | hypothetical protein | - |
| KFV54_RS02860 (KFV54_02860) | 549729..550052 | + | 324 | WP_002504524.1 | hypothetical protein | - |
| KFV54_RS02865 (KFV54_02865) | 550058..550309 | + | 252 | WP_000865652.1 | hypothetical protein | - |
| KFV54_RS02870 (KFV54_02870) | 550309..550491 | + | 183 | WP_002504522.1 | hypothetical protein | - |
| KFV54_RS02875 (KFV54_02875) | 550506..551117 | + | 612 | WP_002504521.1 | nucleoside 2-deoxyribosyltransferase | - |
| KFV54_RS02880 (KFV54_02880) | 551110..551301 | + | 192 | WP_002504520.1 | hypothetical protein | - |
| KFV54_RS02885 (KFV54_02885) | 551291..551977 | + | 687 | WP_002504519.1 | methyltransferase domain-containing protein | - |
| KFV54_RS02890 (KFV54_02890) | 551983..552990 | + | 1008 | WP_010959219.1 | DNA (cytosine-5-)-methyltransferase | - |
| KFV54_RS02895 (KFV54_02895) | 553023..553376 | + | 354 | WP_000792728.1 | hypothetical protein | - |
| KFV54_RS02900 (KFV54_02900) | 553379..553561 | + | 183 | WP_000356944.1 | hypothetical protein | - |
| KFV54_RS02905 (KFV54_02905) | 553575..553805 | + | 231 | WP_000824898.1 | hypothetical protein | - |
| KFV54_RS02910 (KFV54_02910) | 553805..554401 | + | 597 | WP_002504517.1 | hypothetical protein | - |
| KFV54_RS02915 (KFV54_02915) | 554527..555036 | + | 510 | WP_002504516.1 | siphovirus Gp157 family protein | - |
| KFV54_RS02920 (KFV54_02920) | 555048..555749 | + | 702 | WP_010959216.1 | hypothetical protein | - |
| KFV54_RS02925 (KFV54_02925) | 555768..555920 | + | 153 | WP_002504514.1 | hypothetical protein | - |
| KFV54_RS02930 (KFV54_02930) | 555938..556363 | + | 426 | WP_223297881.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| KFV54_RS02935 (KFV54_02935) | 556363..556809 | + | 447 | WP_002504512.1 | hypothetical protein | - |
| KFV54_RS02940 (KFV54_02940) | 556831..559737 | + | 2907 | Protein_574 | intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| KFV54_RS02945 (KFV54_02945) | 559894..560718 | + | 825 | WP_063278495.1 | HNH endonuclease | - |
| KFV54_RS02950 (KFV54_02950) | 560897..561265 | + | 369 | Protein_576 | intein-containing ribonucleoside-diphosphate reductase subunit alpha | - |
| KFV54_RS02955 (KFV54_02955) | 561311..562333 | + | 1023 | WP_002504509.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| KFV54_RS02960 (KFV54_02960) | 562361..562963 | + | 603 | WP_002504508.1 | AAA family ATPase | - |
| KFV54_RS02965 (KFV54_02965) | 563004..563252 | + | 249 | WP_002504507.1 | thioredoxin family protein | - |
| KFV54_RS02970 (KFV54_02970) | 563268..563507 | + | 240 | WP_002504506.1 | hypothetical protein | - |
| KFV54_RS02975 (KFV54_02975) | 563520..564266 | + | 747 | WP_002504505.1 | NTP pyrophosphohydrolase | - |
| KFV54_RS02980 (KFV54_02980) | 564268..564663 | + | 396 | WP_002504504.1 | hypothetical protein | - |
| KFV54_RS02985 (KFV54_02985) | 564647..565240 | + | 594 | WP_001130902.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KFV54_RS02990 (KFV54_02990) | 565442..566023 | + | 582 | WP_002504503.1 | SANT/Myb-like DNA-binding domain-containing protein | - |
| KFV54_RS02995 (KFV54_02995) | 566013..567551 | + | 1539 | WP_001260014.1 | hypothetical protein ; Integrase | Integrase |
| KFV54_RS03000 (KFV54_03000) | 567626..568381 | + | 756 | Protein_586 | YeeE/YedE family protein | - |
| KFV54_RS03005 (KFV54_03005) | 568433..568657 | + | 225 | WP_002469006.1 | sulfurtransferase TusA family protein | - |
| KFV54_RS03010 (KFV54_03010) | 569091..570341 | + | 1251 | WP_002477475.1 | ammonium transporter | - |
| KFV54_RS03015 (KFV54_03015) | 570477..571430 | + | 954 | WP_002468995.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus epidermidis isolate BPH0662 | Prophage | TA10179 | NZ_LT571449 | 1774530..1906238 | 0.001 |