MGE detailed information

MGE type: Prophage        MGE length: 134051 bp
Accession: NZ_CP073855        Location: 1857973..1992023         Organism: Staphylococcus epidermidis strain B1269488       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KFV48_RS08840 (KFV48_08860) 1853468..1854940 - 1473 WP_002469009.1 sucrose-6-phosphate hydrolase -
KFV48_RS08845 (KFV48_08865) 1855200..1856153 - 954 WP_002468995.1 LacI family DNA-binding transcriptional regulator -
KFV48_RS08850 (KFV48_08870) 1856289..1857539 - 1251 WP_002477475.1 ammonium transporter -
KFV48_RS08855 (KFV48_08875) 1857973..1858197 - 225 WP_002469006.1 sulfurtransferase TusA family protein -
KFV48_RS08860 (KFV48_08880) 1858249..1859004 - 756 Protein_1717 YeeE/YedE family protein -
KFV48_RS08865 (KFV48_08885) 1859079..1860617 - 1539 WP_001260014.1 hypothetical protein ; Integrase Integrase
KFV48_RS08870 (KFV48_08890) 1860607..1861188 - 582 WP_002504503.1 SANT/Myb-like DNA-binding domain-containing protein -
KFV48_RS08875 (KFV48_08895) 1861390..1861983 - 594 WP_001130902.1 RusA family crossover junction endodeoxyribonuclease -
KFV48_RS08880 (KFV48_08900) 1861967..1862362 - 396 WP_002504504.1 hypothetical protein -
KFV48_RS08885 (KFV48_08905) 1862364..1863110 - 747 WP_002504505.1 NTP pyrophosphohydrolase -
KFV48_RS08890 (KFV48_08910) 1863123..1863362 - 240 WP_002504506.1 hypothetical protein -
KFV48_RS08895 (KFV48_08915) 1863378..1863626 - 249 WP_002504507.1 thioredoxin family protein -
KFV48_RS08900 (KFV48_08920) 1863667..1864269 - 603 WP_002504508.1 AAA family ATPase -
KFV48_RS08905 (KFV48_08925) 1864297..1865319 - 1023 WP_002504509.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
KFV48_RS08910 (KFV48_08930) 1865365..1865733 - 369 Protein_1727 intein-containing ribonucleoside-diphosphate reductase subunit alpha -
KFV48_RS08915 (KFV48_08935) 1865912..1866736 - 825 WP_063278495.1 HNH endonuclease -
KFV48_RS08920 (KFV48_08940) 1866893..1869799 - 2907 Protein_1729 intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha -
KFV48_RS08925 (KFV48_08945) 1869821..1870267 - 447 WP_002504512.1 hypothetical protein -
KFV48_RS08930 (KFV48_08950) 1870267..1870692 - 426 WP_223297881.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
KFV48_RS08935 (KFV48_08955) 1870710..1870862 - 153 WP_002504514.1 hypothetical protein -
KFV48_RS08940 (KFV48_08960) 1870881..1871582 - 702 WP_010959216.1 hypothetical protein -
KFV48_RS08945 (KFV48_08965) 1871594..1872103 - 510 WP_002504516.1 siphovirus Gp157 family protein -
KFV48_RS08950 (KFV48_08970) 1872229..1872711 - 483 WP_225973628.1 hypothetical protein -
KFV48_RS08955 (KFV48_08975) 1872825..1873055 - 231 WP_000824898.1 hypothetical protein -
KFV48_RS08960 (KFV48_08980) 1873069..1873251 - 183 WP_000356944.1 hypothetical protein -
KFV48_RS08965 (KFV48_08985) 1873254..1873607 - 354 WP_000792728.1 hypothetical protein -
KFV48_RS08970 (KFV48_08990) 1873640..1874638 - 999 WP_000598581.1 DNA cytosine methyltransferase -
KFV48_RS08975 (KFV48_08995) 1874653..1875339 - 687 WP_002504519.1 methyltransferase domain-containing protein -
KFV48_RS08980 (KFV48_09000) 1875329..1875520 - 192 WP_002504520.1 hypothetical protein -
KFV48_RS08985 (KFV48_09005) 1875513..1876124 - 612 WP_002504521.1 nucleoside 2-deoxyribosyltransferase -
KFV48_RS08990 (KFV48_09010) 1876139..1876321 - 183 WP_002504522.1 hypothetical protein -
KFV48_RS08995 (KFV48_09015) 1876321..1876572 - 252 WP_000865652.1 hypothetical protein -
KFV48_RS09000 (KFV48_09020) 1876578..1876901 - 324 WP_002504524.1 hypothetical protein -
KFV48_RS09005 (KFV48_09025) 1876882..1877169 - 288 WP_219045179.1 hypothetical protein -
KFV48_RS09010 (KFV48_09030) 1877162..1877428 - 267 WP_002504526.1 hypothetical protein -
KFV48_RS09015 (KFV48_09035) 1877440..1877613 - 174 WP_000119719.1 hypothetical protein -
KFV48_RS09020 (KFV48_09040) 1877727..1878116 - 390 WP_002504527.1 hypothetical protein -
KFV48_RS09025 (KFV48_09045) 1878204..1879502 - 1299 WP_010959221.1 ATP-dependent DNA ligase -
KFV48_RS09030 (KFV48_09050) 1879512..1879826 - 315 WP_002504529.1 hypothetical protein -
KFV48_RS09035 (KFV48_09055) 1879964..1880326 - 363 WP_016187713.1 hypothetical protein -
KFV48_RS09040 (KFV48_09060) 1880456..1882942 - 2487 WP_002504531.1 hypothetical protein -
KFV48_RS09045 (KFV48_09065) 1883405..1884853 - 1449 WP_010959223.1 PHP domain-containing protein -
KFV48_RS09050 (KFV48_09070) 1884866..1885240 - 375 WP_002504533.1 hypothetical protein -
KFV48_RS09055 (KFV48_09075) 1885406..1885966 + 561 WP_002504534.1 hypothetical protein -
KFV48_RS09060 (KFV48_09080) 1886319..1886723 + 405 WP_002504535.1 YolD-like family protein -
KFV48_RS13560 1886806..1886940 + 135 WP_002504536.1 hypothetical protein -
KFV48_RS09065 (KFV48_09085) 1886971..1887612 - 642 WP_002504537.1 hypothetical protein -
KFV48_RS09070 (KFV48_09090) 1887718..1888440 - 723 WP_002504538.1 hypothetical protein -
KFV48_RS09075 (KFV48_09095) 1888549..1889349 - 801 WP_000686449.1 metallophosphoesterase -
KFV48_RS09080 (KFV48_09100) 1889353..1889847 - 495 WP_010959224.1 hypothetical protein -
KFV48_RS09085 (KFV48_09105) 1889904..1890173 - 270 WP_000755772.1 hypothetical protein -
KFV48_RS09090 (KFV48_09110) 1890157..1890288 - 132 WP_257243913.1 hypothetical protein -
KFV48_RS09095 (KFV48_09115) 1890651..1891046 - 396 WP_002504557.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
KFV48_RS09100 (KFV48_09120) 1891046..1891276 - 231 WP_002504558.1 addiction module antitoxin Antitoxin Detail
KFV48_RS09105 (KFV48_09125) 1891439..1891957 - 519 WP_002504559.1 metallophosphoesterase -
KFV48_RS09110 (KFV48_09130) 1891957..1892607 - 651 WP_002504560.1 hypothetical protein -
KFV48_RS09115 (KFV48_09135) 1892607..1892924 - 318 WP_002504561.1 hypothetical protein -
KFV48_RS09120 (KFV48_09140) 1892917..1893642 - 726 WP_010959229.1 metallophosphoesterase -
KFV48_RS09125 (KFV48_09145) 1893642..1893863 - 222 WP_002504563.1 hypothetical protein -
KFV48_RS09130 (KFV48_09150) 1893883..1894059 - 177 WP_002504564.1 hypothetical protein -
KFV48_RS09135 (KFV48_09155) 1894052..1894594 - 543 WP_002504565.1 hypothetical protein -
KFV48_RS09140 (KFV48_09160) 1894610..1894882 - 273 WP_002504566.1 hypothetical protein -
KFV48_RS09145 (KFV48_09165) 1894908..1895063 - 156 WP_002504567.1 transcriptional activator RinB -
KFV48_RS09150 (KFV48_09170) 1895060..1895344 - 285 WP_002504568.1 hypothetical protein -
KFV48_RS09155 (KFV48_09175) 1895360..1895545 - 186 WP_001187008.1 hypothetical protein -
KFV48_RS09160 (KFV48_09180) 1895530..1895709 - 180 WP_002504569.1 hypothetical protein -
KFV48_RS09165 (KFV48_09185) 1895725..1896207 - 483 WP_002504570.1 hypothetical protein -
KFV48_RS09170 (KFV48_09190) 1896209..1896397 - 189 WP_002504571.1 Lar family restriction alleviation protein -
KFV48_RS09175 (KFV48_09195) 1896404..1896607 - 204 WP_002504572.1 hypothetical protein -
KFV48_RS09180 (KFV48_09200) 1896612..1896878 - 267 WP_002504573.1 hypothetical protein -
KFV48_RS09185 (KFV48_09205) 1896900..1897175 - 276 WP_002504574.1 hypothetical protein -
KFV48_RS09190 (KFV48_09210) 1897198..1897437 - 240 WP_002504575.1 hypothetical protein -
KFV48_RS09195 (KFV48_09215) 1897459..1897683 - 225 WP_000359469.1 hypothetical protein -
KFV48_RS09200 (KFV48_09220) 1897689..1898036 - 348 WP_000862563.1 thermonuclease family protein -
KFV48_RS09205 (KFV48_09225) 1898033..1898443 - 411 WP_002504576.1 YopX family protein -
KFV48_RS09210 (KFV48_09230) 1898483..1898746 - 264 WP_000312937.1 hypothetical protein -
KFV48_RS09215 (KFV48_09235) 1898749..1899057 - 309 WP_002504577.1 hypothetical protein -
KFV48_RS09220 (KFV48_09240) 1899349..1899624 - 276 WP_002504579.1 hypothetical protein -
KFV48_RS09225 (KFV48_09245) 1899637..1899834 - 198 WP_002504580.1 hypothetical protein -
KFV48_RS09230 (KFV48_09250) 1899845..1900891 - 1047 WP_002504581.1 hypothetical protein -
KFV48_RS09235 (KFV48_09255) 1900935..1901609 + 675 WP_001106022.1 IS6 family transposase IS257R1 Transposase
KFV48_RS09240 (KFV48_09260) 1901665..1902087 - 423 Protein_1794 DegV family protein -
KFV48_RS09245 (KFV48_09265) 1902150..1903322 + 1173 WP_000195429.1 IS256 family transposase IS256 Transposase
KFV48_RS09250 (KFV48_09270) 1903452..1904891 - 1440 WP_001028141.1 Bifunctional AAC/APH ARG
KFV48_RS09255 (KFV48_09275) 1904892..1905284 - 393 WP_000393259.1 GNAT family N-acetyltransferase -
KFV48_RS09260 (KFV48_09280) 1905341..1906513 - 1173 WP_000195429.1 IS256 family transposase IS256 Transposase
KFV48_RS09265 (KFV48_09285) 1906647..1907132 - 486 WP_000175735.1 trimethoprim-resistant dihydrofolate reductase DfrS1 -
KFV48_RS09270 (KFV48_09290) 1907174..1908130 - 957 WP_000282655.1 thymidylate synthase -
KFV48_RS09275 (KFV48_09295) 1908244..1908918 + 675 WP_001106019.1 IS6 family transposase IS257R2 Transposase
KFV48_RS09280 (KFV48_09300) 1909216..1909953 - 738 WP_010959234.1 MBL fold metallo-hydrolase -
KFV48_RS09285 (KFV48_09305) 1910146..1911912 - 1767 WP_010959235.1 single-stranded DNA-binding protein -
KFV48_RS09290 (KFV48_09310) 1911915..1913027 - 1113 WP_002504675.1 hypothetical protein -
KFV48_RS09295 (KFV48_09315) 1913044..1914576 - 1533 WP_002504676.1 DnaB-like helicase C-terminal domain-containing protein -
KFV48_RS09300 (KFV48_09320) 1914598..1915116 - 519 WP_002504677.1 hypothetical protein -
KFV48_RS09305 (KFV48_09325) 1915193..1916161 - 969 WP_002504678.1 ATP-binding protein -
KFV48_RS09310 (KFV48_09330) 1916285..1917244 - 960 WP_000852323.1 hypothetical protein -
KFV48_RS09315 (KFV48_09335) 1917288..1917968 - 681 WP_000668931.1 hypothetical protein -
KFV48_RS09320 (KFV48_09340) 1917986..1918474 - 489 WP_002504679.1 hypothetical protein -
KFV48_RS09325 (KFV48_09345) 1918490..1918738 - 249 WP_002504680.1 hypothetical protein -
KFV48_RS09330 (KFV48_09350) 1918898..1919902 - 1005 WP_002504681.1 hypothetical protein -
KFV48_RS09335 (KFV48_09355) 1919914..1921194 - 1281 WP_002504682.1 DNA sulfur modification protein DndB -
KFV48_RS09340 (KFV48_09360) 1921505..1922548 - 1044 WP_002504683.1 Tyrosine recombinase XerC ; Integrase Integrase
KFV48_RS09345 (KFV48_09365) 1923232..1923660 - 429 WP_002504685.1 hypothetical protein -
KFV48_RS09350 (KFV48_09370) 1923738..1924259 - 522 WP_063278515.1 hypothetical protein -
KFV48_RS09355 (KFV48_09375) 1924259..1924711 - 453 WP_010959239.1 hypothetical protein -
KFV48_RS09360 (KFV48_09380) 1924827..1925507 - 681 WP_010959240.1 hypothetical protein -
KFV48_RS09365 (KFV48_09385) 1925536..1925799 - 264 WP_002504623.1 hypothetical protein -
KFV48_RS09370 (KFV48_09390) 1925892..1926215 - 324 WP_002504624.1 hypothetical protein -
KFV48_RS09375 (KFV48_09395) 1926259..1926918 - 660 WP_002504625.1 antirestriction protein ArdA -
KFV48_RS09380 (KFV48_09400) 1927071..1927460 - 390 WP_010959241.1 hypothetical protein -
KFV48_RS09385 (KFV48_09405) 1927597..1927857 - 261 WP_010959242.1 hypothetical protein -
KFV48_RS09390 (KFV48_09410) 1927932..1928147 - 216 WP_002504552.1 hypothetical protein -
KFV48_RS09395 (KFV48_09415) 1928327..1928611 - 285 WP_002504554.1 hypothetical protein -
KFV48_RS09400 (KFV48_09420) 1932506..1933381 - 876 WP_002504834.1 hypothetical protein -
KFV48_RS09405 (KFV48_09425) 1933417..1934253 - 837 WP_225973555.1 ATP-dependent RecD-like DNA helicase -
KFV48_RS09410 (KFV48_09430) 1934346..1935524 - 1179 WP_104832459.1 IS110 family transposase ISSep2 Transposase
KFV48_RS09415 (KFV48_09435) 1935733..1937262 - 1530 WP_225973550.1 AAA family ATPase -
KFV48_RS09420 (KFV48_09440) 1937398..1938894 + 1497 WP_002504833.1 hypothetical protein -
KFV48_RS09425 (KFV48_09445) 1939154..1939483 + 330 WP_002504832.1 HU family DNA-binding protein -
KFV48_RS09430 (KFV48_09450) 1939509..1939694 + 186 WP_000057341.1 YonK family protein -
KFV48_RS09435 (KFV48_09455) 1939703..1940887 + 1185 WP_002504831.1 hypothetical protein -
KFV48_RS09440 (KFV48_09460) 1942582..1943466 + 885 WP_001007716.1 hypothetical protein -
KFV48_RS09445 (KFV48_09465) 1943459..1945258 + 1800 WP_002504830.1 terminase family protein -
KFV48_RS09450 (KFV48_09470) 1945276..1946838 + 1563 WP_000389594.1 hypothetical protein -
KFV48_RS09455 (KFV48_09475) 1946831..1948210 + 1380 WP_002504829.1 hypothetical protein -
KFV48_RS09460 (KFV48_09480) 1948238..1948678 + 441 WP_002504828.1 hypothetical protein -
KFV48_RS09465 (KFV48_09485) 1948717..1949718 + 1002 WP_002504827.1 hypothetical protein -
KFV48_RS09470 (KFV48_09490) 1949793..1950344 + 552 WP_000985467.1 hypothetical protein -
KFV48_RS09475 (KFV48_09495) 1950362..1950796 + 435 WP_000134539.1 hypothetical protein -
KFV48_RS09480 (KFV48_09500) 1950786..1951103 + 318 WP_001086334.1 hypothetical protein -
KFV48_RS09485 (KFV48_09505) 1951107..1951772 + 666 WP_000384369.1 hypothetical protein -
KFV48_RS09490 (KFV48_09510) 1951762..1952283 + 522 WP_001177112.1 hypothetical protein -
KFV48_RS09495 (KFV48_09515) 1952289..1953161 + 873 WP_000391855.1 hypothetical protein -
KFV48_RS09500 (KFV48_09520) 1953200..1953991 + 792 WP_002504825.1 hypothetical protein -
KFV48_RS09505 (KFV48_09525) 1954075..1954632 + 558 WP_000700062.1 hypothetical protein -
KFV48_RS09510 (KFV48_09530) 1954632..1955105 + 474 WP_002504823.1 hypothetical protein -
KFV48_RS09515 (KFV48_09535) 1955121..1956137 + 1017 WP_010959245.1 Tyrosine recombinase XerC ; Integrase Integrase
KFV48_RS09520 (KFV48_09540) 1956234..1964507 + 8274 WP_012085820.1 phage tail tape measure protein -
KFV48_RS09525 (KFV48_09545) 1964529..1966610 + 2082 WP_002504820.1 hypothetical protein -
KFV48_RS09530 (KFV48_09550) 1966671..1974716 + 8046 WP_012085822.1 hypothetical protein -
KFV48_RS09535 (KFV48_09555) 1974719..1975093 + 375 WP_002504818.1 hypothetical protein -
KFV48_RS09540 (KFV48_09560) 1975086..1975253 + 168 WP_002504817.1 hypothetical protein -
KFV48_RS09545 (KFV48_09565) 1975295..1977964 + 2670 WP_012085824.1 tail fiber domain-containing protein -
KFV48_RS09550 (KFV48_09570) 1978011..1978472 + 462 WP_010959248.1 hypothetical protein -
KFV48_RS09555 (KFV48_09575) 1978454..1978966 + 513 WP_002504814.1 hypothetical protein -
KFV48_RS09560 (KFV48_09580) 1978988..1979317 + 330 WP_002504813.1 phage holin -
KFV48_RS09565 (KFV48_09585) 1979369..1981762 + 2394 WP_002504812.1 SGNH/GDSL hydrolase family protein -
KFV48_RS09570 (KFV48_09590) 1981839..1983341 + 1503 WP_002504811.1 N-acetylmuramoyl-L-alanine amidase -
KFV48_RS09575 (KFV48_09595) 1983417..1983617 - 201 WP_002504810.1 hypothetical protein -
KFV48_RS09580 (KFV48_09600) 1983997..1984173 - 177 WP_002504809.1 hypothetical protein -
KFV48_RS09585 (KFV48_09605) 1984312..1985958 - 1647 WP_002504808.1 hypothetical protein -
KFV48_RS09590 (KFV48_09610) 1986101..1986706 - 606 WP_063278548.1 LPXTG cell wall anchor domain-containing protein -
KFV48_RS09595 (KFV48_09615) 1987024..1987323 - 300 Protein_1865 YeeE/YedE thiosulfate transporter family protein -
KFV48_RS09600 (KFV48_09620) 1987410..1987691 - 282 WP_002497516.1 PH domain-containing protein -
KFV48_RS09610 (KFV48_09630) 1989107..1989742 - 636 WP_002468998.1 redox-sensing transcriptional repressor Rex -
KFV48_RS09615 (KFV48_09635) 1990089..1992023 + 1935 WP_002468991.1 ABC-F family ATP-binding cassette domain-containing protein -
KFV48_RS09620 (KFV48_09640) 1992365..1993981 + 1617 WP_002469004.1 AAA family ATPase -
KFV48_RS09625 (KFV48_09645) 1994064..1995086 - 1023 WP_002469005.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
KFV48_RS09630 (KFV48_09650) 1995083..1995544 - 462 WP_001829994.1 ribosomal protein S18-alanine N-acetyltransferase -
KFV48_RS09635 (KFV48_09655) 1995517..1996179 - 663 WP_002468996.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
KFV48_RS09640 (KFV48_09660) 1996160..1996621 - 462 WP_002469001.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Staphylococcus epidermidis isolate BPH0662 Prophage TA10179 NZ_LT571449 1774530..1906238 0.001