MGE detailed information
MGE type: Prophage MGE length: 134051 bp
Accession: NZ_CP073824 Location: 718961..853011 Organism: Staphylococcus epidermidis strain B1200599 Replicon: chromosome
Accession: NZ_CP073824 Location: 718961..853011 Organism: Staphylococcus epidermidis strain B1200599 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFV28_RS03615 (KFV28_03615) | 714363..714824 | + | 462 | WP_002469001.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| KFV28_RS03620 (KFV28_03620) | 714805..715467 | + | 663 | WP_002468996.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| KFV28_RS03625 (KFV28_03625) | 715440..715901 | + | 462 | WP_001829994.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| KFV28_RS03630 (KFV28_03630) | 715898..716920 | + | 1023 | WP_002469005.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| KFV28_RS03635 (KFV28_03635) | 717003..718619 | - | 1617 | WP_002469004.1 | AAA family ATPase | - |
| KFV28_RS03640 (KFV28_03640) | 718961..720895 | - | 1935 | WP_002468991.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| KFV28_RS03645 (KFV28_03645) | 721242..721877 | + | 636 | WP_002468998.1 | redox-sensing transcriptional repressor Rex | - |
| KFV28_RS03650 (KFV28_03650) | 721987..723128 | + | 1142 | WP_089418807.1 | IS3 family transposase ISSau4 | Transposase |
| KFV28_RS03655 (KFV28_03655) | 723293..723574 | + | 282 | WP_002497516.1 | PH domain-containing protein | - |
| KFV28_RS03660 (KFV28_03660) | 723661..723960 | + | 300 | Protein_701 | YeeE/YedE thiosulfate transporter family protein | - |
| KFV28_RS03665 (KFV28_03665) | 724278..724883 | + | 606 | WP_063278548.1 | LPXTG cell wall anchor domain-containing protein | - |
| KFV28_RS03670 (KFV28_03670) | 725026..726672 | + | 1647 | WP_002504808.1 | hypothetical protein | - |
| KFV28_RS03675 (KFV28_03675) | 726811..726987 | + | 177 | WP_002504809.1 | hypothetical protein | - |
| KFV28_RS03680 (KFV28_03680) | 727367..727567 | + | 201 | WP_002504810.1 | hypothetical protein | - |
| KFV28_RS03685 (KFV28_03685) | 727643..729145 | - | 1503 | WP_002504811.1 | N-acetylmuramoyl-L-alanine amidase | - |
| KFV28_RS03690 (KFV28_03690) | 729222..731615 | - | 2394 | WP_002504812.1 | SGNH/GDSL hydrolase family protein | - |
| KFV28_RS03695 (KFV28_03695) | 731667..731996 | - | 330 | WP_002504813.1 | phage holin | - |
| KFV28_RS03700 (KFV28_03700) | 732018..732530 | - | 513 | WP_002504814.1 | hypothetical protein | - |
| KFV28_RS03705 (KFV28_03705) | 732512..732913 | - | 402 | WP_002504815.1 | hypothetical protein | - |
| KFV28_RS03710 (KFV28_03710) | 733020..735689 | - | 2670 | WP_012085824.1 | tail fiber domain-containing protein | - |
| KFV28_RS03715 (KFV28_03715) | 735731..735898 | - | 168 | WP_002504817.1 | hypothetical protein | - |
| KFV28_RS03720 (KFV28_03720) | 735891..736265 | - | 375 | WP_002504818.1 | hypothetical protein | - |
| KFV28_RS03725 (KFV28_03725) | 736268..744313 | - | 8046 | WP_012085822.1 | hypothetical protein | - |
| KFV28_RS03730 (KFV28_03730) | 744374..746455 | - | 2082 | WP_002504820.1 | hypothetical protein | - |
| KFV28_RS03735 (KFV28_03735) | 746477..754750 | - | 8274 | WP_012085820.1 | phage tail tape measure protein | - |
| KFV28_RS03740 (KFV28_03740) | 754847..755863 | - | 1017 | WP_010959245.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KFV28_RS03745 (KFV28_03745) | 755879..756352 | - | 474 | WP_002504823.1 | hypothetical protein | - |
| KFV28_RS03750 (KFV28_03750) | 756352..756909 | - | 558 | WP_000700062.1 | hypothetical protein | - |
| KFV28_RS03755 (KFV28_03755) | 756993..757784 | - | 792 | WP_002504825.1 | hypothetical protein | - |
| KFV28_RS03760 (KFV28_03760) | 757823..758695 | - | 873 | WP_000391855.1 | hypothetical protein | - |
| KFV28_RS03765 (KFV28_03765) | 758701..759222 | - | 522 | WP_001177112.1 | hypothetical protein | - |
| KFV28_RS03770 (KFV28_03770) | 759212..759877 | - | 666 | WP_000384369.1 | hypothetical protein | - |
| KFV28_RS03775 (KFV28_03775) | 759881..760162 | - | 282 | WP_227489983.1 | hypothetical protein | - |
| KFV28_RS03780 (KFV28_03780) | 760188..760622 | - | 435 | WP_000134539.1 | hypothetical protein | - |
| KFV28_RS03785 (KFV28_03785) | 760640..761191 | - | 552 | WP_000985467.1 | hypothetical protein | - |
| KFV28_RS03790 (KFV28_03790) | 761266..762267 | - | 1002 | WP_002504827.1 | hypothetical protein | - |
| KFV28_RS03795 (KFV28_03795) | 762306..762746 | - | 441 | WP_002504828.1 | hypothetical protein | - |
| KFV28_RS03800 (KFV28_03800) | 762774..764153 | - | 1380 | WP_002504829.1 | hypothetical protein | - |
| KFV28_RS03805 (KFV28_03805) | 764146..765708 | - | 1563 | WP_000389594.1 | hypothetical protein | - |
| KFV28_RS03810 (KFV28_03810) | 765726..767525 | - | 1800 | WP_002504830.1 | terminase family protein | - |
| KFV28_RS03815 (KFV28_03815) | 767518..768402 | - | 885 | WP_001007716.1 | hypothetical protein | - |
| KFV28_RS03820 (KFV28_03820) | 770097..771281 | - | 1185 | WP_002504831.1 | hypothetical protein | - |
| KFV28_RS03825 (KFV28_03825) | 771290..771475 | - | 186 | WP_000057341.1 | YonK family protein | - |
| KFV28_RS03830 (KFV28_03830) | 771501..771830 | - | 330 | WP_002504832.1 | HU family DNA-binding protein | - |
| KFV28_RS03835 (KFV28_03835) | 772090..773586 | - | 1497 | WP_002504833.1 | hypothetical protein | - |
| KFV28_RS03840 (KFV28_03840) | 773722..775251 | + | 1530 | WP_225973550.1 | AAA family ATPase | - |
| KFV28_RS03845 (KFV28_03845) | 775460..776638 | + | 1179 | WP_104832459.1 | IS110 family transposase ISSep2 | Transposase |
| KFV28_RS03850 (KFV28_03850) | 776731..777567 | + | 837 | WP_225973555.1 | ATP-dependent RecD-like DNA helicase | - |
| KFV28_RS03855 (KFV28_03855) | 777603..778478 | + | 876 | WP_002504834.1 | hypothetical protein | - |
| KFV28_RS03860 (KFV28_03860) | 780859..781020 | + | 162 | WP_010959243.1 | hypothetical protein | - |
| KFV28_RS03865 (KFV28_03865) | 782373..782657 | + | 285 | WP_002504554.1 | hypothetical protein | - |
| KFV28_RS03870 (KFV28_03870) | 782837..783052 | + | 216 | WP_002504552.1 | hypothetical protein | - |
| KFV28_RS03875 (KFV28_03875) | 783127..783387 | + | 261 | WP_010959242.1 | hypothetical protein | - |
| KFV28_RS03880 (KFV28_03880) | 783524..783913 | + | 390 | WP_010959241.1 | hypothetical protein | - |
| KFV28_RS03885 (KFV28_03885) | 784066..784725 | + | 660 | WP_002504625.1 | antirestriction protein ArdA | - |
| KFV28_RS03890 (KFV28_03890) | 784769..785092 | + | 324 | WP_002504624.1 | hypothetical protein | - |
| KFV28_RS03895 (KFV28_03895) | 785185..785448 | + | 264 | WP_002504623.1 | hypothetical protein | - |
| KFV28_RS03900 (KFV28_03900) | 785477..786157 | + | 681 | WP_010959240.1 | hypothetical protein | - |
| KFV28_RS03905 (KFV28_03905) | 786273..786725 | + | 453 | WP_010959239.1 | hypothetical protein | - |
| KFV28_RS03910 (KFV28_03910) | 786725..787246 | + | 522 | WP_063278515.1 | hypothetical protein | - |
| KFV28_RS03915 (KFV28_03915) | 787324..787752 | + | 429 | WP_002504685.1 | hypothetical protein | - |
| KFV28_RS03920 (KFV28_03920) | 788436..789479 | + | 1044 | WP_002504683.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KFV28_RS03925 (KFV28_03925) | 789790..791070 | + | 1281 | WP_002504682.1 | DNA sulfur modification protein DndB | - |
| KFV28_RS03930 (KFV28_03930) | 791082..792086 | + | 1005 | WP_002504681.1 | hypothetical protein | - |
| KFV28_RS03935 (KFV28_03935) | 792246..792494 | + | 249 | WP_002504680.1 | hypothetical protein | - |
| KFV28_RS03940 (KFV28_03940) | 792510..792998 | + | 489 | WP_002504679.1 | hypothetical protein | - |
| KFV28_RS03945 (KFV28_03945) | 793016..793696 | + | 681 | WP_000668931.1 | hypothetical protein | - |
| KFV28_RS03950 (KFV28_03950) | 793740..794699 | + | 960 | WP_000852323.1 | hypothetical protein | - |
| KFV28_RS03955 (KFV28_03955) | 794823..795791 | + | 969 | WP_002504678.1 | ATP-binding protein | - |
| KFV28_RS03960 (KFV28_03960) | 795868..796386 | + | 519 | WP_002504677.1 | hypothetical protein | - |
| KFV28_RS03965 (KFV28_03965) | 796408..797940 | + | 1533 | WP_002504676.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| KFV28_RS03970 (KFV28_03970) | 797957..799069 | + | 1113 | WP_002504675.1 | hypothetical protein | - |
| KFV28_RS03975 (KFV28_03975) | 799072..800838 | + | 1767 | WP_010959235.1 | single-stranded DNA-binding protein | - |
| KFV28_RS03980 (KFV28_03980) | 801031..801768 | + | 738 | WP_010959234.1 | MBL fold metallo-hydrolase | - |
| KFV28_RS03985 (KFV28_03985) | 802066..802740 | - | 675 | WP_001106019.1 | IS6 family transposase IS257R2 | Transposase |
| KFV28_RS03990 (KFV28_03990) | 802854..803810 | + | 957 | WP_000282655.1 | thymidylate synthase | - |
| KFV28_RS03995 (KFV28_03995) | 803852..804337 | + | 486 | WP_000175735.1 | trimethoprim-resistant dihydrofolate reductase DfrS1 | - |
| KFV28_RS04000 (KFV28_04000) | 804471..805643 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| KFV28_RS04005 (KFV28_04005) | 805700..806092 | + | 393 | WP_000393259.1 | GNAT family N-acetyltransferase | - |
| KFV28_RS04010 (KFV28_04010) | 806093..807532 | + | 1440 | WP_001028141.1 | Bifunctional AAC/APH | ARG |
| KFV28_RS04015 (KFV28_04015) | 807662..808834 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| KFV28_RS04020 (KFV28_04020) | 808897..809319 | + | 423 | Protein_773 | DegV family protein | - |
| KFV28_RS04025 (KFV28_04025) | 809375..810049 | - | 675 | WP_001106022.1 | IS6 family transposase IS257R1 | Transposase |
| KFV28_RS04030 (KFV28_04030) | 810093..811139 | + | 1047 | WP_002504581.1 | hypothetical protein | - |
| KFV28_RS04035 (KFV28_04035) | 811150..811347 | + | 198 | WP_002504580.1 | hypothetical protein | - |
| KFV28_RS04040 (KFV28_04040) | 811360..811635 | + | 276 | WP_002504579.1 | hypothetical protein | - |
| KFV28_RS04045 (KFV28_04045) | 811927..812235 | + | 309 | WP_002504577.1 | hypothetical protein | - |
| KFV28_RS04050 (KFV28_04050) | 812238..812501 | + | 264 | WP_000312937.1 | hypothetical protein | - |
| KFV28_RS04055 (KFV28_04055) | 812541..812951 | + | 411 | WP_002504576.1 | YopX family protein | - |
| KFV28_RS04060 (KFV28_04060) | 812948..813295 | + | 348 | WP_000862563.1 | thermonuclease family protein | - |
| KFV28_RS04065 (KFV28_04065) | 813301..813525 | + | 225 | WP_000359469.1 | hypothetical protein | - |
| KFV28_RS04070 (KFV28_04070) | 813547..813786 | + | 240 | WP_002504575.1 | hypothetical protein | - |
| KFV28_RS04075 (KFV28_04075) | 813809..814084 | + | 276 | WP_002504574.1 | hypothetical protein | - |
| KFV28_RS04080 (KFV28_04080) | 814106..814372 | + | 267 | WP_002504573.1 | hypothetical protein | - |
| KFV28_RS04085 (KFV28_04085) | 814377..814580 | + | 204 | WP_002504572.1 | hypothetical protein | - |
| KFV28_RS04090 (KFV28_04090) | 814587..814775 | + | 189 | WP_002504571.1 | Lar family restriction alleviation protein | - |
| KFV28_RS04095 (KFV28_04095) | 814777..815259 | + | 483 | WP_002504570.1 | hypothetical protein | - |
| KFV28_RS04100 (KFV28_04100) | 815275..815454 | + | 180 | WP_002504569.1 | hypothetical protein | - |
| KFV28_RS04105 (KFV28_04105) | 815439..815624 | + | 186 | WP_001187008.1 | hypothetical protein | - |
| KFV28_RS04110 (KFV28_04110) | 815640..815924 | + | 285 | WP_002504568.1 | hypothetical protein | - |
| KFV28_RS04115 (KFV28_04115) | 815921..816076 | + | 156 | WP_002504567.1 | transcriptional activator RinB | - |
| KFV28_RS04120 (KFV28_04120) | 816102..816374 | + | 273 | WP_002504566.1 | hypothetical protein | - |
| KFV28_RS04125 (KFV28_04125) | 816390..816932 | + | 543 | WP_002504565.1 | hypothetical protein | - |
| KFV28_RS04130 (KFV28_04130) | 816925..817101 | + | 177 | WP_002504564.1 | hypothetical protein | - |
| KFV28_RS04135 (KFV28_04135) | 817121..817342 | + | 222 | WP_002504563.1 | hypothetical protein | - |
| KFV28_RS04140 (KFV28_04140) | 817342..818067 | + | 726 | WP_010959229.1 | metallophosphoesterase | - |
| KFV28_RS04145 (KFV28_04145) | 818060..818377 | + | 318 | WP_002504561.1 | hypothetical protein | - |
| KFV28_RS04150 (KFV28_04150) | 818377..819027 | + | 651 | WP_002504560.1 | hypothetical protein | - |
| KFV28_RS04155 (KFV28_04155) | 819027..819545 | + | 519 | WP_002504559.1 | metallophosphoesterase | - |
| KFV28_RS04160 (KFV28_04160) | 819708..819938 | + | 231 | WP_002504558.1 | addiction module antitoxin | Antitoxin Detail |
| KFV28_RS04165 (KFV28_04165) | 819938..820333 | + | 396 | WP_002504557.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KFV28_RS04170 (KFV28_04170) | 820636..820827 | + | 192 | WP_002504556.1 | hypothetical protein | - |
| KFV28_RS04175 (KFV28_04175) | 820811..821080 | + | 270 | WP_000755772.1 | hypothetical protein | - |
| KFV28_RS04180 (KFV28_04180) | 821137..821631 | + | 495 | WP_010959224.1 | hypothetical protein | - |
| KFV28_RS04185 (KFV28_04185) | 821635..822435 | + | 801 | WP_000686449.1 | metallophosphoesterase | - |
| KFV28_RS04190 (KFV28_04190) | 822544..823266 | + | 723 | WP_002504538.1 | hypothetical protein | - |
| KFV28_RS04195 (KFV28_04195) | 823372..824013 | + | 642 | WP_002504537.1 | hypothetical protein | - |
| KFV28_RS13350 | 824044..824178 | - | 135 | WP_002504536.1 | hypothetical protein | - |
| KFV28_RS04200 (KFV28_04200) | 824261..824665 | - | 405 | WP_002504535.1 | YolD-like family protein | - |
| KFV28_RS04205 (KFV28_04205) | 825018..825578 | - | 561 | WP_002504534.1 | hypothetical protein | - |
| KFV28_RS04210 (KFV28_04210) | 825744..826118 | + | 375 | WP_002504533.1 | hypothetical protein | - |
| KFV28_RS04215 (KFV28_04215) | 826131..827579 | + | 1449 | WP_010959223.1 | PHP domain-containing protein | - |
| KFV28_RS04220 (KFV28_04220) | 828042..830528 | + | 2487 | WP_002504531.1 | hypothetical protein | - |
| KFV28_RS04225 (KFV28_04225) | 830658..831020 | + | 363 | WP_016187713.1 | hypothetical protein | - |
| KFV28_RS04230 (KFV28_04230) | 831158..831472 | + | 315 | WP_002504529.1 | hypothetical protein | - |
| KFV28_RS04235 (KFV28_04235) | 831482..832780 | + | 1299 | WP_010959221.1 | ATP-dependent DNA ligase | - |
| KFV28_RS04240 (KFV28_04240) | 832868..833257 | + | 390 | WP_002504527.1 | hypothetical protein | - |
| KFV28_RS04245 (KFV28_04245) | 833371..833544 | + | 174 | WP_000119719.1 | hypothetical protein | - |
| KFV28_RS04250 (KFV28_04250) | 833556..833822 | + | 267 | WP_002504526.1 | hypothetical protein | - |
| KFV28_RS04255 (KFV28_04255) | 833815..834102 | + | 288 | WP_219045179.1 | hypothetical protein | - |
| KFV28_RS04260 (KFV28_04260) | 834083..834406 | + | 324 | WP_002504524.1 | hypothetical protein | - |
| KFV28_RS04265 (KFV28_04265) | 834412..834663 | + | 252 | WP_000865652.1 | hypothetical protein | - |
| KFV28_RS04270 (KFV28_04270) | 834663..834845 | + | 183 | WP_002504522.1 | hypothetical protein | - |
| KFV28_RS04275 (KFV28_04275) | 834860..835471 | + | 612 | WP_002504521.1 | nucleoside 2-deoxyribosyltransferase | - |
| KFV28_RS04280 (KFV28_04280) | 835464..835655 | + | 192 | WP_002504520.1 | hypothetical protein | - |
| KFV28_RS04285 (KFV28_04285) | 835645..836331 | + | 687 | WP_002504519.1 | methyltransferase domain-containing protein | - |
| KFV28_RS04290 (KFV28_04290) | 836337..837344 | + | 1008 | WP_010959219.1 | DNA (cytosine-5-)-methyltransferase | - |
| KFV28_RS04295 (KFV28_04295) | 837377..837730 | + | 354 | WP_000792728.1 | hypothetical protein | - |
| KFV28_RS04300 (KFV28_04300) | 837733..837915 | + | 183 | WP_000356944.1 | hypothetical protein | - |
| KFV28_RS04305 (KFV28_04305) | 837929..838159 | + | 231 | WP_000824898.1 | hypothetical protein | - |
| KFV28_RS04310 (KFV28_04310) | 838159..838755 | + | 597 | WP_002504517.1 | hypothetical protein | - |
| KFV28_RS04315 (KFV28_04315) | 838881..839390 | + | 510 | WP_002504516.1 | siphovirus Gp157 family protein | - |
| KFV28_RS04320 (KFV28_04320) | 839402..840103 | + | 702 | WP_010959216.1 | hypothetical protein | - |
| KFV28_RS04325 (KFV28_04325) | 840122..840274 | + | 153 | WP_002504514.1 | hypothetical protein | - |
| KFV28_RS04330 (KFV28_04330) | 840292..840717 | + | 426 | WP_223297881.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| KFV28_RS04335 (KFV28_04335) | 840717..841163 | + | 447 | WP_002504512.1 | hypothetical protein | - |
| KFV28_RS04340 (KFV28_04340) | 841185..844091 | + | 2907 | Protein_838 | intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| KFV28_RS04345 (KFV28_04345) | 844248..845072 | + | 825 | WP_063278495.1 | HNH endonuclease | - |
| KFV28_RS04350 (KFV28_04350) | 845251..845619 | + | 369 | Protein_840 | intein-containing ribonucleoside-diphosphate reductase subunit alpha | - |
| KFV28_RS04355 (KFV28_04355) | 845665..846687 | + | 1023 | WP_002504509.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| KFV28_RS04360 (KFV28_04360) | 846715..847317 | + | 603 | WP_002504508.1 | AAA family ATPase | - |
| KFV28_RS04365 (KFV28_04365) | 847358..847606 | + | 249 | WP_002504507.1 | thioredoxin family protein | - |
| KFV28_RS04370 (KFV28_04370) | 847622..847861 | + | 240 | WP_002504506.1 | hypothetical protein | - |
| KFV28_RS04375 (KFV28_04375) | 847874..848620 | + | 747 | WP_002504505.1 | NTP pyrophosphohydrolase | - |
| KFV28_RS04380 (KFV28_04380) | 848622..849017 | + | 396 | WP_002504504.1 | hypothetical protein | - |
| KFV28_RS04385 (KFV28_04385) | 849001..849594 | + | 594 | WP_001130902.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KFV28_RS04390 (KFV28_04390) | 849796..850377 | + | 582 | WP_002504503.1 | SANT/Myb-like DNA-binding domain-containing protein | - |
| KFV28_RS04395 (KFV28_04395) | 850367..851905 | + | 1539 | WP_001260014.1 | hypothetical protein ; Integrase | Integrase |
| KFV28_RS04400 (KFV28_04400) | 851980..852735 | + | 756 | Protein_850 | YeeE/YedE family protein | - |
| KFV28_RS04405 (KFV28_04405) | 852787..853011 | + | 225 | WP_002469006.1 | sulfurtransferase TusA family protein | - |
| KFV28_RS04410 (KFV28_04410) | 853445..854695 | + | 1251 | WP_002477475.1 | ammonium transporter | - |
| KFV28_RS04415 (KFV28_04415) | 854831..855784 | + | 954 | WP_002468995.1 | LacI family DNA-binding transcriptional regulator | - |
| KFV28_RS04420 (KFV28_04420) | 856044..857516 | + | 1473 | WP_002469009.1 | sucrose-6-phosphate hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus epidermidis isolate BPH0662 | Prophage | TA10179 | NZ_LT571449 | 1774530..1906238 | 0.001 |