MGE detailed information
MGE type: Genomic_island MGE length: 65363 bp
Accession: NZ_CP073719 Location: 3780298..3845660 Organism: Escherichia coli strain CX12 Replicon: chromosome
Accession: NZ_CP073719 Location: 3780298..3845660 Organism: Escherichia coli strain CX12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O05_RS18780 (3775927) | 3775927..3777435 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O05_RS18785 (3777516) | 3777516..3778004 | + | 489 | Protein_3679 | IS3 family transposase | - |
| J6O05_RS18790 (3777902) | 3777902..3779200 | - | 1299 | WP_057108375.1 | IS256 family transposase | - |
| J6O05_RS18795 (3779418) | 3779418..3779582 | - | 165 | Protein_3681 | transposase domain-containing protein | - |
| J6O05_RS18800 (3779527) | 3779527..3779790 | - | 264 | WP_001247776.1 | transposase | - |
| J6O05_RS18805 (3779805) | 3779805..3780068 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| J6O05_RS18810 (3780298) | 3780298..3780579 | + | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| J6O05_RS18815 (3780614) | 3780614..3781183 | + | 570 | WP_000350437.1 | Small heat shock protein IbpA | VF |
| J6O05_RS18820 (3781289) | 3781289..3784138 | + | 2850 | WP_000101613.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| J6O05_RS18825 (3784138) | 3784138..3784329 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O05_RS18830 (3784390) | 3784390..3786117 | + | 1728 | WP_057108377.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O05_RS18835 (3786205) | 3786205..3786663 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| J6O05_RS18840 (3786686) | 3786686..3787600 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O05_RS18845 (3787703) | 3787703..3788590 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O05_RS18850 (3788680) | 3788680..3789291 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O05_RS18855 (3789371) | 3789371..3790516 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O05_RS18860 (3790506) | 3790506..3790946 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O05_RS18865 (3790950) | 3790950..3792665 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O05_RS18870 (3792662) | 3792662..3793159 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O05_RS18875 (3793137) | 3793137..3794102 | + | 966 | WP_223566505.1 | zinc metalloprotease HtpX | - |
| J6O05_RS18880 (3794127) | 3794127..3795278 | + | 1152 | WP_000323727.1 | hypothetical protein | VF |
| J6O05_RS18885 (3795503) | 3795503..3796072 | - | 570 | Protein_3699 | IS5 family transposase ISThi1 | Transposase |
| J6O05_RS18890 (3797193) | 3797193..3798056 | + | 864 | WP_057108380.1 | GTPase family protein | - |
| J6O05_RS18895 (3798148) | 3798148..3798969 | + | 822 | WP_000197387.1 | DUF932 domain-containing protein | - |
| J6O05_RS18900 (3799186) | 3799186..3799887 | + | 702 | Protein_3702 | WYL domain-containing protein | - |
| J6O05_RS18905 (3799928) | 3799928..3800164 | + | 237 | WP_223566506.1 | protein YpjK | - |
| J6O05_RS18910 (3800164) | 3800164..3800607 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O05_RS18915 (3800630) | 3800630..3801097 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O05_RS18920 (3801174) | 3801174..3801413 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O05_RS18925 (3801511) | 3801511..3801969 | + | 459 | Protein_3707 | antirestriction protein | - |
| J6O05_RS18930 (3801985) | 3801985..3802461 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O05_RS18935 (3802470) | 3802470..3802691 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O05_RS18940 (3802710) | 3802710..3803027 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O05_RS18945 (3803048) | 3803048..3803389 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O05_RS18950 (3803632) | 3803632..3804329 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| J6O05_RS18960 (3804738) | 3804738..3805991 | - | 1254 | WP_057108326.1 | glutamate-5-semialdehyde dehydrogenase | - |
| J6O05_RS18965 (3806003) | 3806003..3807106 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| J6O05_RS18970 (3807394) | 3807394..3808449 | + | 1056 | WP_223566508.1 | phosphoporin PhoE | - |
| J6O05_RS18975 (3808488) | 3808488..3808889 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3809607) | 3809607..3809687 | - | 81 | NuclAT_13 | - | - |
| - (3809607) | 3809607..3809687 | - | 81 | NuclAT_13 | - | - |
| - (3809607) | 3809607..3809687 | - | 81 | NuclAT_13 | - | - |
| - (3809607) | 3809607..3809687 | - | 81 | NuclAT_13 | - | - |
| J6O05_RS18980 (3808947) | 3808947..3810191 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| J6O05_RS18985 (3810283) | 3810283..3810741 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| J6O05_RS18990 (3811002) | 3811002..3812459 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| J6O05_RS18995 (3812516) | 3812516..3813037 | - | 522 | Protein_3720 | peptide chain release factor H | - |
| J6O05_RS19000 (3813033) | 3813033..3813239 | - | 207 | Protein_3721 | RtcB family protein | - |
| J6O05_RS19005 (3813521) | 3813521..3814501 | - | 981 | WP_049109356.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O05_RS19010 (3814758) | 3814758..3815210 | - | 453 | WP_072146325.1 | GNAT family N-acetyltransferase | - |
| J6O05_RS19015 (3815220) | 3815220..3815618 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| J6O05_RS19020 (3815621) | 3815621..3815914 | - | 294 | WP_001399937.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| J6O05_RS19025 (3815966) | 3815966..3817021 | - | 1056 | WP_001226161.1 | DNA polymerase IV | - |
| J6O05_RS19030 (3817092) | 3817092..3817877 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| J6O05_RS19035 (3817849) | 3817849..3819561 | + | 1713 | Protein_3728 | hypothetical protein | VF |
| J6O05_RS19040 (3819879) | 3819879..3820376 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| J6O05_RS19045 (3820552) | 3820552..3821301 | - | 750 | WP_000093940.1 | hypothetical protein | VF |
| J6O05_RS19050 (3821602) | 3821602..3822342 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| J6O05_RS19055 (3822313) | 3822313..3823080 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| J6O05_RS19060 (3823286) | 3823286..3823864 | - | 579 | WP_057108329.1 | Phosphoheptose isomerase | VF |
| J6O05_RS19065 (3824104) | 3824104..3826548 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| J6O05_RS19070 (3826591) | 3826591..3827037 | - | 447 | WP_024198545.1 | Ivy family C-type lysozyme inhibitor | - |
| J6O05_RS19075 (3827218) | 3827218..3827988 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| J6O05_RS19080 (3828030) | 3828030..3829166 | - | 1137 | Protein_3737 | ISAs1 family transposase ISEc1 | Transposase |
| J6O05_RS19085 (3829427) | 3829427..3829876 | - | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| J6O05_RS19090 (3829888) | 3829888..3834141 | - | 4254 | WP_223566510.1 | hypothetical protein | VF |
| J6O05_RS19095 (3834217) | 3834217..3836358 | - | 2142 | WP_000103319.1 | hypothetical protein | VF |
| J6O05_RS19100 (3836568) | 3836568..3837086 | - | 519 | WP_001142958.1 | hypothetical protein | VF |
| J6O05_RS19105 (3837267) | 3837267..3837964 | + | 698 | WP_223566512.1 | IS1 family transposase IS1S | Transposase |
| J6O05_RS19110 (3838125) | 3838125..3839574 | + | 1450 | Protein_3743 | hypothetical protein | VF |
| J6O05_RS19115 (3839501) | 3839501..3839983 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| J6O05_RS19120 (3840027) | 3840027..3840941 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| J6O05_RS19125 (3840951) | 3840951..3841430 | + | 480 | WP_001236643.1 | protein YkfM | - |
| J6O05_RS19130 (3841567) | 3841567..3842352 | - | 786 | WP_057108553.1 | hypothetical protein | - |
| J6O05_RS19140 (3842889) | 3842889..3843620 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| J6O05_RS19145 (3843685) | 3843685..3844152 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| J6O05_RS19150 (3844149) | 3844149..3844871 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| J6O05_RS19155 (3844905) | 3844905..3845660 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| J6O05_RS19160 (3845732) | 3845732..3847090 | + | 1359 | WP_057108552.1 | murein transglycosylase D | - |
| J6O05_RS19165 (3847138) | 3847138..3847734 | - | 597 | Protein_3753 | class I SAM-dependent methyltransferase | - |
| J6O05_RS19170 (3847765) | 3847765..3848565 | - | 801 | WP_057108550.1 | endonuclease/exonuclease/phosphatase family protein | - |
| J6O05_RS19175 (3848806) | 3848806..3849720 | + | 915 | WP_057108549.1 | DNA-binding transcriptional regulator YafC | - |
| J6O05_RS19180 (3849717) | 3849717..3850520 | - | 804 | WP_000997036.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|