MGE detailed information
MGE type: Genomic_island MGE length: 65364 bp
Accession: NZ_CP073718 Location: 3778703..3844066 Organism: Escherichia coli strain CX08 Replicon: chromosome
Accession: NZ_CP073718 Location: 3778703..3844066 Organism: Escherichia coli strain CX08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O57_RS18775 (3774332) | 3774332..3775840 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| J6O57_RS18780 (3775921) | 3775921..3776409 | + | 489 | Protein_3676 | IS3 family transposase | - |
| J6O57_RS18785 (3776307) | 3776307..3777605 | - | 1299 | WP_057108375.1 | IS256 family transposase | - |
| J6O57_RS18790 (3777823) | 3777823..3777987 | - | 165 | Protein_3678 | transposase domain-containing protein | - |
| J6O57_RS18795 (3777932) | 3777932..3778195 | - | 264 | WP_001247776.1 | transposase | - |
| J6O57_RS18800 (3778210) | 3778210..3778473 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| J6O57_RS18805 (3778703) | 3778703..3778984 | + | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| J6O57_RS18810 (3779019) | 3779019..3779588 | + | 570 | WP_000350437.1 | Small heat shock protein IbpA | VF |
| J6O57_RS18815 (3779694) | 3779694..3782543 | + | 2850 | WP_000101613.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| J6O57_RS18820 (3782543) | 3782543..3782734 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| J6O57_RS18825 (3782795) | 3782795..3784522 | + | 1728 | WP_057108377.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| J6O57_RS18830 (3784610) | 3784610..3785068 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| J6O57_RS18835 (3785091) | 3785091..3786005 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| J6O57_RS18840 (3786108) | 3786108..3786995 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| J6O57_RS18845 (3787085) | 3787085..3787696 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| J6O57_RS18850 (3787776) | 3787776..3788921 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| J6O57_RS18855 (3788911) | 3788911..3789351 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| J6O57_RS18860 (3789355) | 3789355..3791070 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| J6O57_RS18865 (3791067) | 3791067..3791564 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| J6O57_RS18870 (3791542) | 3791542..3792507 | + | 966 | WP_223566505.1 | zinc metalloprotease HtpX | - |
| J6O57_RS18875 (3792532) | 3792532..3793683 | + | 1152 | WP_000323727.1 | hypothetical protein | VF |
| J6O57_RS18880 (3793908) | 3793908..3794477 | - | 570 | Protein_3696 | IS5 family transposase ISThi1 | Transposase |
| J6O57_RS18885 (3795599) | 3795599..3796462 | + | 864 | WP_057108380.1 | GTPase family protein | - |
| J6O57_RS18890 (3796554) | 3796554..3797375 | + | 822 | WP_000197387.1 | DUF932 domain-containing protein | - |
| J6O57_RS18895 (3797592) | 3797592..3798293 | + | 702 | Protein_3699 | WYL domain-containing protein | - |
| J6O57_RS18900 (3798334) | 3798334..3798570 | + | 237 | WP_223566506.1 | protein YpjK | - |
| J6O57_RS18905 (3798570) | 3798570..3799013 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O57_RS18910 (3799036) | 3799036..3799503 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O57_RS18915 (3799580) | 3799580..3799819 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O57_RS18920 (3799917) | 3799917..3800375 | + | 459 | Protein_3704 | antirestriction protein | - |
| J6O57_RS18925 (3800391) | 3800391..3800867 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O57_RS18930 (3800876) | 3800876..3801097 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O57_RS18935 (3801116) | 3801116..3801433 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O57_RS18940 (3801454) | 3801454..3801795 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O57_RS18945 (3802038) | 3802038..3802735 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| J6O57_RS18955 (3803144) | 3803144..3804397 | - | 1254 | WP_057108326.1 | glutamate-5-semialdehyde dehydrogenase | - |
| J6O57_RS18960 (3804409) | 3804409..3805512 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| J6O57_RS18965 (3805800) | 3805800..3806855 | + | 1056 | WP_223566508.1 | phosphoporin PhoE | - |
| J6O57_RS18970 (3806894) | 3806894..3807295 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3808013) | 3808013..3808093 | - | 81 | NuclAT_13 | - | - |
| - (3808013) | 3808013..3808093 | - | 81 | NuclAT_13 | - | - |
| - (3808013) | 3808013..3808093 | - | 81 | NuclAT_13 | - | - |
| - (3808013) | 3808013..3808093 | - | 81 | NuclAT_13 | - | - |
| J6O57_RS18975 (3807353) | 3807353..3808597 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| J6O57_RS18980 (3808689) | 3808689..3809147 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| J6O57_RS18985 (3809408) | 3809408..3810865 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| J6O57_RS18990 (3810922) | 3810922..3811443 | - | 522 | Protein_3717 | peptide chain release factor H | - |
| J6O57_RS18995 (3811439) | 3811439..3811645 | - | 207 | Protein_3718 | RtcB family protein | - |
| J6O57_RS19000 (3811927) | 3811927..3812907 | - | 981 | WP_049109356.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O57_RS19005 (3813164) | 3813164..3813616 | - | 453 | WP_072146325.1 | GNAT family N-acetyltransferase | - |
| J6O57_RS19010 (3813626) | 3813626..3814024 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| J6O57_RS19015 (3814027) | 3814027..3814320 | - | 294 | WP_001399937.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| J6O57_RS19020 (3814372) | 3814372..3815427 | - | 1056 | WP_001226161.1 | DNA polymerase IV | - |
| J6O57_RS19025 (3815498) | 3815498..3816283 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| J6O57_RS19030 (3816255) | 3816255..3817967 | + | 1713 | Protein_3725 | hypothetical protein | VF |
| J6O57_RS19035 (3818285) | 3818285..3818782 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| J6O57_RS19040 (3818958) | 3818958..3819707 | - | 750 | WP_000093940.1 | hypothetical protein | VF |
| J6O57_RS19045 (3820008) | 3820008..3820748 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| J6O57_RS19050 (3820719) | 3820719..3821486 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| J6O57_RS19055 (3821692) | 3821692..3822270 | - | 579 | WP_057108329.1 | Phosphoheptose isomerase | VF |
| J6O57_RS19060 (3822510) | 3822510..3824954 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| J6O57_RS19065 (3824997) | 3824997..3825443 | - | 447 | WP_024198545.1 | Ivy family C-type lysozyme inhibitor | - |
| J6O57_RS19070 (3825624) | 3825624..3826394 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| J6O57_RS19075 (3826436) | 3826436..3827572 | - | 1137 | Protein_3734 | ISAs1 family transposase ISEc1 | Transposase |
| J6O57_RS19080 (3827833) | 3827833..3828282 | - | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| J6O57_RS19085 (3828294) | 3828294..3832547 | - | 4254 | WP_223566510.1 | hypothetical protein | VF |
| J6O57_RS19090 (3832623) | 3832623..3834764 | - | 2142 | WP_000103319.1 | hypothetical protein | VF |
| J6O57_RS19095 (3834974) | 3834974..3835492 | - | 519 | WP_001142958.1 | hypothetical protein | VF |
| J6O57_RS19100 (3835673) | 3835673..3836370 | + | 698 | WP_223566512.1 | IS1 family transposase IS1S | Transposase |
| J6O57_RS19105 (3836531) | 3836531..3837980 | + | 1450 | Protein_3740 | hypothetical protein | VF |
| J6O57_RS19110 (3837907) | 3837907..3838389 | + | 483 | WP_001284199.1 | hypothetical protein | VF |
| J6O57_RS19115 (3838433) | 3838433..3839347 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| J6O57_RS19120 (3839357) | 3839357..3839836 | + | 480 | WP_001236643.1 | protein YkfM | - |
| J6O57_RS19125 (3839973) | 3839973..3840758 | - | 786 | WP_057108553.1 | hypothetical protein | - |
| J6O57_RS19135 (3841295) | 3841295..3842026 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| J6O57_RS19140 (3842091) | 3842091..3842558 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| J6O57_RS19145 (3842555) | 3842555..3843277 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| J6O57_RS19150 (3843311) | 3843311..3844066 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| J6O57_RS19155 (3844138) | 3844138..3845496 | + | 1359 | WP_057108552.1 | murein transglycosylase D | - |
| J6O57_RS19160 (3845544) | 3845544..3846140 | - | 597 | Protein_3750 | class I SAM-dependent methyltransferase | - |
| J6O57_RS19165 (3846171) | 3846171..3846971 | - | 801 | WP_057108550.1 | endonuclease/exonuclease/phosphatase family protein | - |
| J6O57_RS19170 (3847212) | 3847212..3848126 | + | 915 | WP_057108549.1 | DNA-binding transcriptional regulator YafC | - |
| J6O57_RS19175 (3848123) | 3848123..3848926 | - | 804 | WP_000997036.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|