MGE detailed information
MGE type: Conjugative plasmid MGE length: 122855 bp
Accession: NZ_CP073590 Location: 1..122855 Organism: Escherichia coli strain MFDS1006657 Replicon: plasmid pMFDS1006657
Accession: NZ_CP073590 Location: 1..122855 Organism: Escherichia coli strain MFDS1006657 Replicon: plasmid pMFDS1006657
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KD154_RS24280 (48) | 48..284 | + | 237 | WP_001369996.1 | hypothetical protein | - |
| KD154_RS24285 (325) | 325..1023 | - | 699 | WP_000431492.1 | lactate utilization protein C | - |
| KD154_RS24290 (1028) | 1028..2443 | - | 1416 | WP_000054160.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| KD154_RS24295 (2454) | 2454..3173 | - | 720 | WP_001102092.1 | (Fe-S)-binding protein | - |
| KD154_RS24300 (3224) | 3224..4780 | - | 1557 | WP_000554412.1 | L-lactate permease | - |
| KD154_RS24305 (5145) | 5145..5493 | - | 349 | Protein_5 | integrase core domain-containing protein | - |
| KD154_RS24310 (5513) | 5513..6142 | - | 630 | Protein_6 | transposase | - |
| KD154_RS24315 (6247) | 6247..7772 | - | 1526 | Protein_7 | IS3 family transposase | - |
| KD154_RS24320 (7859) | 7859..8293 | - | 435 | Protein_8 | transposase | - |
| KD154_RS24325 (8623) | 8623..9170 | - | 548 | Protein_9 | transposase | - |
| KD154_RS24330 (9778) | 9778..10062 | + | 285 | WP_000439678.1 | adhesin biosynthesis transcription regulatory family protein | - |
| KD154_RS24335 (10283) | 10283..14590 | + | 4308 | WP_024177480.1 | YadA-like family protein | - |
| KD154_RS24340 (14615) | 14615..15418 | + | 804 | WP_000899428.1 | outer membrane protein assembly factor BamE | - |
| KD154_RS24345 (15846) | 15846..16361 | + | 516 | WP_001365635.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| KD154_RS24350 (16363) | 16363..19359 | + | 2997 | WP_011310119.1 | enterohemolysin EhxA | - |
| KD154_RS24355 (19409) | 19409..21529 | + | 2121 | WP_072094473.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| KD154_RS24360 (21533) | 21533..22972 | + | 1440 | WP_001213534.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| KD154_RS25250 (23039) | 23039..23215 | + | 177 | Protein_17 | transcriptional regulator | - |
| KD154_RS24365 (23264) | 23264..23587 | + | 324 | WP_235176086.1 | MarR family transcriptional regulator | - |
| KD154_RS24370 (23717) | 23717..23947 | + | 231 | WP_032279745.1 | hypothetical protein | - |
| KD154_RS24375 (24104) | 24104..24386 | + | 283 | Protein_20 | transposase family protein | - |
| KD154_RS24380 (24625) | 24625..25602 | - | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| KD154_RS24385 (26344) | 26344..26496 | + | 153 | Protein_22 | IS481 family transposase | - |
| KD154_RS24390 (26773) | 26773..27504 | + | 732 | WP_000850413.1 | conjugal transfer complement resistance protein TraT | - |
| KD154_RS24395 (27614) | 27614..27934 | + | 321 | WP_001365556.1 | colicin-like pore-forming protein | - |
| KD154_RS24400 (27941) | 27941..28150 | - | 210 | WP_225303885.1 | colicin E1 immunity protein | - |
| KD154_RS24405 (28404) | 28404..28751 | + | 348 | WP_000142428.1 | DUF6404 family protein | - |
| KD154_RS24410 (28769) | 28769..29359 | - | 591 | WP_000194564.1 | hypothetical protein | - |
| KD154_RS24415 (29356) | 29356..29616 | - | 261 | WP_000343084.1 | hypothetical protein | - |
| KD154_RS24420 (30212) | 30212..30430 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KD154_RS24425 (30432) | 30432..30737 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KD154_RS24430 (30738) | 30738..31547 | + | 810 | WP_000016958.1 | site-specific integrase | - |
| KD154_RS24435 (31685) | 31685..31960 | - | 276 | WP_000239527.1 | hypothetical protein | - |
| KD154_RS24440 (31954) | 31954..32598 | - | 645 | WP_000633912.1 | division plane positioning ATPase MipZ | - |
| KD154_RS24445 (32827) | 32827..33798 | + | 972 | WP_001103695.1 | plasmid segregation protein ParM | - |
| KD154_RS24450 (33803) | 33803..34195 | + | 393 | WP_000340836.1 | plasmid partitioning/stability family protein | - |
| KD154_RS24455 (34200) | 34200..35470 | - | 1271 | Protein_36 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KD154_RS24460 (35470) | 35470..35907 | - | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KD154_RS24465 (35904) | 35904..36152 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| KD154_RS24470 (36571) | 36571..37473 | + | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| KD154_RS24475 (37477) | 37477..37782 | + | 306 | WP_032236829.1 | hypothetical protein | - |
| KD154_RS24480 (37859) | 37859..38542 | + | 684 | WP_024213724.1 | DNA methylase | - |
| KD154_RS24485 (38543) | 38543..38764 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| KD154_RS24490 (38694) | 38694..39212 | + | 519 | WP_224065154.1 | DUF1380 family protein | - |
| KD154_RS24495 (39257) | 39257..40027 | + | 771 | WP_024213723.1 | hypothetical protein | - |
| KD154_RS24500 (40443) | 40443..40868 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| KD154_RS24505 (40915) | 40915..41334 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| KD154_RS24510 (41334) | 41334..41525 | + | 192 | WP_001027514.1 | hypothetical protein | - |
| KD154_RS25255 (41504) | 41504..41960 | - | 457 | Protein_48 | hypothetical protein | - |
| KD154_RS24515 (42018) | 42018..42320 | + | 303 | WP_024213649.1 | hypothetical protein | - |
| KD154_RS24520 (42476) | 42476..42763 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| KD154_RS24525 (42882) | 42882..43703 | + | 822 | WP_024213651.1 | DUF932 domain-containing protein | - |
| KD154_RS24530 (43999) | 43999..44589 | - | 591 | WP_279600944.1 | transglycosylase SLT domain-containing protein | - |
| KD154_RS24535 (44922) | 44922..45305 | + | 384 | WP_001585112.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KD154_RS24540 (45499) | 45499..46146 | + | 648 | WP_052892413.1 | transcriptional regulator TraJ family protein | - |
| KD154_RS24545 (46265) | 46265..46492 | + | 228 | WP_000589554.1 | conjugal transfer relaxosome protein TraY | - |
| KD154_RS24550 (46527) | 46527..46880 | + | 354 | WP_001098216.1 | type IV conjugative transfer system pilin TraA | - |
| KD154_RS24555 (46895) | 46895..47206 | + | 312 | WP_000012108.1 | type IV conjugative transfer system protein TraL | - |
| KD154_RS24560 (47228) | 47228..47794 | + | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| KD154_RS24565 (47781) | 47781..48509 | + | 729 | WP_001365587.1 | type-F conjugative transfer system secretin TraK | - |
| KD154_RS24570 (48509) | 48509..49939 | + | 1431 | WP_000146622.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KD154_RS24575 (49929) | 49929..50516 | + | 588 | WP_000002895.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KD154_RS24580 (50503) | 50503..50823 | + | 321 | WP_024214338.1 | conjugal transfer protein TrbD | - |
| KD154_RS24585 (50816) | 50816..51067 | + | 252 | WP_001038336.1 | conjugal transfer protein TrbG | - |
| KD154_RS24590 (51064) | 51064..51579 | + | 516 | WP_024213657.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KD154_RS24595 (51714) | 51714..51935 | + | 222 | WP_001278977.1 | conjugal transfer protein TraR | - |
| KD154_RS24600 (51928) | 51928..52323 | + | 396 | WP_000549593.1 | hypothetical protein | - |
| KD154_RS24605 (52388) | 52388..52807 | + | 420 | WP_202831963.1 | hypothetical protein | - |
| KD154_RS25260 (52887) | 52887..53105 | + | 219 | WP_062855972.1 | hypothetical protein | - |
| KD154_RS24610 (53133) | 53133..53480 | + | 348 | WP_000836684.1 | hypothetical protein | - |
| KD154_RS24615 (53605) | 53605..56235 | + | 2631 | WP_053265369.1 | type IV secretion system protein TraC | - |
| KD154_RS24620 (56232) | 56232..56618 | + | 387 | WP_047091614.1 | type-F conjugative transfer system protein TrbI | - |
| KD154_RS24625 (56615) | 56615..57247 | + | 633 | WP_000877291.1 | type-F conjugative transfer system protein TraW | - |
| KD154_RS24630 (57244) | 57244..58236 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| KD154_RS24635 (58263) | 58263..58541 | + | 279 | WP_021573907.1 | hypothetical protein | - |
| KD154_RS24640 (58825) | 58825..59463 | + | 639 | WP_024213660.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KD154_RS24645 (59460) | 59460..59840 | + | 381 | WP_024213661.1 | hypothetical protein | - |
| KD154_RS24650 (60075) | 60075..61979 | + | 1905 | WP_024213662.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KD154_RS24655 (61993) | 61993..62250 | + | 258 | WP_024213663.1 | conjugal transfer protein TrbE | - |
| KD154_RS24660 (62243) | 62243..62986 | + | 744 | WP_024213664.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KD154_RS24665 (63000) | 63000..63365 | + | 366 | WP_024213665.1 | hypothetical protein | - |
| KD154_RS24670 (63496) | 63496..63897 | + | 402 | WP_024213666.1 | hypothetical protein | - |
| KD154_RS24675 (63963) | 63963..64250 | + | 288 | WP_000335419.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KD154_RS24680 (64237) | 64237..64782 | + | 546 | WP_001477377.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KD154_RS24685 (64712) | 64712..65059 | + | 348 | WP_071531747.1 | P-type conjugative transfer protein TrbJ | - |
| KD154_RS24690 (65040) | 65040..65432 | + | 393 | WP_024213667.1 | F-type conjugal transfer protein TrbF | - |
| KD154_RS24695 (65419) | 65419..66792 | + | 1374 | WP_024213668.1 | conjugal transfer pilus assembly protein TraH | - |
| KD154_RS24700 (66789) | 66789..69610 | + | 2822 | Protein_87 | conjugal transfer mating-pair stabilization protein TraG | - |
| KD154_RS24705 (69632) | 69632..70128 | + | 497 | Protein_88 | surface exclusion protein | - |
| KD154_RS24710 (70160) | 70160..70891 | + | 732 | WP_033800894.1 | conjugal transfer complement resistance protein TraT | - |
| KD154_RS24715 (70963) | 70963..71574 | + | 612 | WP_244075220.1 | hypothetical protein | - |
| KD154_RS24720 (71856) | 71856..74045 | + | 2190 | WP_087634858.1 | type IV conjugative transfer system coupling protein TraD | - |
| KD154_RS24725 (74045) | 74045..79315 | + | 5271 | WP_024213674.1 | conjugative transfer relaxase/helicase TraI | - |
| KD154_RS24730 (79335) | 79335..80081 | + | 747 | WP_024213675.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| KD154_RS24735 (80164) | 80164..80532 | + | 369 | WP_000722534.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| KD154_RS24740 (80568) | 80568..81125 | + | 558 | WP_024213676.1 | fertility inhibition protein FinO | - |
| KD154_RS24745 (81275) | 81275..81478 | + | 204 | WP_038811942.1 | hypothetical protein | - |
| KD154_RS24750 (82221) | 82221..82682 | + | 462 | WP_053265357.1 | thermonuclease family protein | - |
| KD154_RS25380 (83033) | 83033..83167 | + | 135 | WP_001058542.1 | hypothetical protein | - |
| - (83342) | 83342..83398 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (83342) | 83342..83398 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (83342) | 83342..83398 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (83342) | 83342..83398 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| KD154_RS24760 (83446) | 83446..83595 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| KD154_RS24765 (83879) | 83879..84136 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| KD154_RS24770 (84371) | 84371..84445 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KD154_RS24775 (84438) | 84438..85295 | + | 858 | WP_000130991.1 | incFII family plasmid replication initiator RepA | - |
| KD154_RS24785 (86271) | 86271..86510 | + | 240 | WP_000859017.1 | winged helix-turn-helix transcriptional regulator | - |
| KD154_RS24790 (87125) | 87125..88890 | + | 1766 | Protein_104 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| KD154_RS24795 (88903) | 88903..98343 | + | 9441 | WP_251377886.1 | contact-dependent inhibition toxin CdiA | - |
| KD154_RS24800 (98336) | 98336..98596 | + | 261 | WP_000038919.1 | hypothetical protein | - |
| KD154_RS24805 (99025) | 99025..100018 | - | 994 | Protein_107 | IS110 family transposase | - |
| KD154_RS24810 (100215) | 100215..100388 | - | 174 | Protein_108 | Tn3 family transposase | - |
| KD154_RS24815 (100719) | 100719..101942 | + | 1224 | Protein_109 | VENN motif pre-toxin domain-containing protein | - |
| KD154_RS24820 (101942) | 101942..102127 | + | 186 | WP_071531845.1 | CPCC family cysteine-rich protein | - |
| KD154_RS24825 (102432) | 102432..102857 | + | 426 | WP_047091715.1 | transposase | - |
| KD154_RS24830 (102854) | 102854..103202 | + | 349 | Protein_112 | IS66 family insertion sequence element accessory protein TnpB | - |
| KD154_RS24835 (103233) | 103233..104197 | + | 965 | Protein_113 | transposase | - |
| KD154_RS24840 (104251) | 104251..105294 | + | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| KD154_RS24845 (105311) | 105311..105736 | + | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| KD154_RS25265 (105807) | 105807..106016 | + | 210 | Protein_116 | hypothetical protein | - |
| KD154_RS24850 (106020) | 106020..106208 | - | 189 | Protein_117 | transposase domain-containing protein | - |
| KD154_RS24855 (106285) | 106285..106452 | + | 168 | Protein_118 | IS110 family transposase | - |
| KD154_RS24860 (106787) | 106787..107209 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| KD154_RS24865 (107470) | 107470..109557 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| KD154_RS24870 (109865) | 109865..110970 | - | 1106 | Protein_121 | IS3 family transposase | - |
| KD154_RS24875 (111179) | 111179..112783 | - | 1605 | WP_135301417.1 | autoagglutinating adhesin Saa | - |
| KD154_RS24880 (113037) | 113037..113126 | + | 90 | Protein_123 | transposase | - |
| KD154_RS24885 (113193) | 113193..114355 | + | 1163 | Protein_124 | IS3-like element IS3 family transposase | - |
| KD154_RS24890 (114413) | 114413..114733 | + | 321 | WP_000220092.1 | hypothetical protein | - |
| KD154_RS24895 (115223) | 115223..115900 | - | 678 | WP_053265325.1 | hypothetical protein | - |
| KD154_RS24900 (116059) | 116059..116562 | + | 504 | Protein_127 | thermonuclease family protein | - |
| KD154_RS24905 (116942) | 116942..120844 | + | 3903 | WP_047091594.1 | serine protease autotransporter EspP | - |
| KD154_RS24910 (121350) | 121350..121715 | + | 366 | WP_000997727.1 | hypothetical protein | - |
| KD154_RS24915 (121725) | 121725..121916 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| KD154_RS24920 (121983) | 121983..122255 | + | 273 | WP_052077017.1 | hypothetical protein | - |
| KD154_RS24925 (122371) | 122371..122832 | + | 462 | Protein_132 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|