MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107871 bp
Accession: NZ_CP073264 Location: 1..107871 Organism: Duffyella gerundensis strain AR Replicon: plasmid unnamed2
Accession: NZ_CP073264 Location: 1..107871 Organism: Duffyella gerundensis strain AR Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J9874_RS19950 (J9874_03987) | 3415..4011 | + | 597 | WP_225702146.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| J9874_RS19955 (J9874_03988) | 4330..4743 | + | 414 | WP_187493907.1 | hypothetical protein | - |
| J9874_RS19960 (J9874_03989) | 4971..5576 | - | 606 | WP_225702147.1 | hypothetical protein | - |
| J9874_RS19965 (J9874_03990) | 5817..6809 | - | 993 | WP_173645407.1 | threonine/serine dehydratase | - |
| J9874_RS19970 (J9874_03991) | 6862..7200 | + | 339 | WP_067436269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J9874_RS19975 (J9874_03992) | 7488..8135 | - | 648 | WP_225702148.1 | LysE family translocator | - |
| J9874_RS19980 | 8213..9139 | - | 927 | WP_187493909.1 | AraC family transcriptional regulator | - |
| J9874_RS19985 (J9874_03994) | 9334..10251 | - | 918 | WP_187486987.1 | AraC family transcriptional regulator | - |
| J9874_RS19990 (J9874_03995) | 10266..11417 | + | 1152 | WP_225702149.1 | aldo/keto reductase | - |
| J9874_RS19995 (J9874_03996) | 11678..13207 | + | 1530 | WP_067437236.1 | recombinase family protein | - |
| J9874_RS20000 (J9874_03997) | 13292..14050 | - | 759 | WP_225702150.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| J9874_RS20005 (J9874_03998) | 14047..15084 | - | 1038 | WP_225702151.1 | Vitamin B12 import system permease protein BtuC | VF |
| J9874_RS20010 (J9874_03999) | 15084..16085 | - | 1002 | WP_225702170.1 | ABC transporter substrate-binding protein | - |
| J9874_RS20015 (J9874_04000) | 16846..17205 | + | 360 | WP_225702152.1 | hypothetical protein | - |
| J9874_RS20020 (J9874_04001) | 17255..17581 | + | 327 | WP_225702153.1 | NIPSNAP family protein | - |
| J9874_RS20025 (J9874_04002) | 17961..18185 | + | 225 | WP_225702143.1 | DUF6290 family protein | Antitoxin Detail |
| J9874_RS20030 (J9874_04003) | 18169..18435 | + | 267 | WP_225702154.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J9874_RS20035 (J9874_04004) | 18551..18862 | - | 312 | WP_225702155.1 | hypothetical protein | - |
| J9874_RS20040 (J9874_04005) | 19198..19866 | + | 669 | WP_225702156.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| J9874_RS20045 | 19844..20257 | + | 414 | WP_187493924.1 | hypothetical protein | - |
| J9874_RS20050 (J9874_04007) | 20285..21793 | - | 1509 | WP_225702157.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| J9874_RS20055 (J9874_04008) | 21793..22158 | - | 366 | WP_187493926.1 | hypothetical protein | - |
| J9874_RS20060 (J9874_04009) | 22173..23627 | - | 1455 | WP_225702158.1 | integrating conjugative element protein | - |
| J9874_RS20065 (J9874_04010) | 23637..24611 | - | 975 | WP_225702159.1 | TIGR03756 family integrating conjugative element protein | - |
| J9874_RS20070 (J9874_04011) | 24611..25006 | - | 396 | WP_225702160.1 | TIGR03757 family integrating conjugative element protein | - |
| J9874_RS20075 (J9874_04013) | 25259..25591 | + | 333 | WP_187486999.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J9874_RS20080 (J9874_04014) | 25597..26310 | + | 714 | WP_225702171.1 | arsenical resistance protein ArsH | - |
| J9874_RS20085 (J9874_04015) | 26367..26795 | - | 429 | WP_187486990.1 | glutaredoxin-dependent arsenate reductase | - |
| J9874_RS20090 (J9874_04016) | 26845..28128 | - | 1284 | WP_225702161.1 | arsenic transporter | - |
| J9874_RS20095 (J9874_04017) | 28217..28570 | - | 354 | WP_187486988.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J9874_RS20100 (J9874_04018) | 28855..29250 | - | 396 | WP_225702162.1 | hypothetical protein | - |
| J9874_RS20105 (J9874_04019) | 29247..32096 | - | 2850 | WP_225702172.1 | conjugative transfer ATPase | - |
| J9874_RS20110 (J9874_04020) | 32096..32512 | - | 417 | WP_187493937.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| J9874_RS20115 (J9874_04021) | 32524..34065 | - | 1542 | WP_225702163.1 | TIGR03752 family integrating conjugative element protein | - |
| J9874_RS20120 (J9874_04022) | 34055..34969 | - | 915 | WP_225702173.1 | TIGR03749 family integrating conjugative element protein | - |
| J9874_RS20125 (J9874_04023) | 34972..35628 | - | 657 | WP_067437299.1 | TIGR03746 family integrating conjugative element protein | - |
| J9874_RS20130 (J9874_04024) | 35625..35990 | - | 366 | WP_067437301.1 | TIGR03750 family conjugal transfer protein | - |
| J9874_RS20135 (J9874_04025) | 36004..36393 | - | 390 | WP_225702164.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| J9874_RS20140 (J9874_04026) | 36423..36665 | - | 243 | WP_067437306.1 | TIGR03758 family integrating conjugative element protein | - |
| J9874_RS20145 (J9874_04027) | 36665..37000 | - | 336 | WP_187494076.1 | RAQPRD family integrative conjugative element protein | - |
| J9874_RS20150 (J9874_04028) | 37390..37650 | + | 261 | WP_225702165.1 | SymE family type I addiction module toxin | - |
| J9874_RS20155 (J9874_04029) | 37643..38182 | - | 540 | WP_225702166.1 | hypothetical protein | - |
| J9874_RS20160 (J9874_04030) | 38182..49350 | - | 11169 | WP_225702167.1 | tRNA nuclease CdiA | VF |
| J9874_RS20165 (J9874_04031) | 49368..51029 | - | 1662 | WP_225702168.1 | Hemolysin transporter protein ShlB | VF |
| J9874_RS20170 (J9874_04032) | 51538..52308 | - | 771 | WP_067437323.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| J9874_RS20175 (J9874_04033) | 52301..54406 | - | 2106 | WP_225702169.1 | type IV conjugative transfer system coupling protein TraD | - |
| J9874_RS20180 (J9874_04034) | 54399..54971 | - | 573 | WP_225702174.1 | restriction endonuclease | - |
| J9874_RS20185 (J9874_04035) | 54971..55477 | - | 507 | WP_225702105.1 | integrating conjugative element protein | - |
| J9874_RS20190 (J9874_04036) | 55474..56148 | - | 675 | WP_225702106.1 | hypothetical protein | VF |
| J9874_RS20195 (J9874_04037) | 56127..56846 | - | 720 | WP_225702107.1 | TIGR03759 family integrating conjugative element protein | - |
| J9874_RS20200 (J9874_04038) | 56857..57603 | - | 747 | WP_225702108.1 | DUF2275 domain-containing protein | - |
| J9874_RS20205 (J9874_04039) | 57600..58220 | - | 621 | WP_225702109.1 | hypothetical protein | VF |
| J9874_RS20210 (J9874_04040) | 58348..58596 | - | 249 | WP_064703432.1 | DUF2442 domain-containing protein | - |
| J9874_RS20215 (J9874_04041) | 58580..58822 | - | 243 | WP_067437349.1 | DUF4160 domain-containing protein | - |
| J9874_RS20220 (J9874_04042) | 58925..59413 | - | 489 | WP_225702110.1 | STY4534 family ICE replication protein | - |
| J9874_RS20225 (J9874_04043) | 59739..61781 | - | 2043 | WP_225702111.1 | DNA topoisomerase III | - |
| J9874_RS20230 (J9874_04044) | 61797..62369 | - | 573 | WP_225702112.1 | hypothetical protein | - |
| J9874_RS20235 (J9874_04045) | 62371..63084 | - | 714 | WP_225702113.1 | TIGR03761 family integrating conjugative element protein | - |
| J9874_RS20240 (J9874_04046) | 63356..64531 | - | 1176 | WP_225702114.1 | STY4528 family pathogenicity island replication protein | - |
| J9874_RS20245 (J9874_04047) | 64801..65382 | - | 582 | WP_225702115.1 | DUF2857 domain-containing protein | - |
| J9874_RS20250 (J9874_04048) | 65372..66934 | - | 1563 | WP_225702116.1 | chromosome partitioning protein ParB | - |
| J9874_RS20255 (J9874_04049) | 66931..68310 | - | 1380 | WP_225702117.1 | SPI-7-type island replicative DNA helicase | - |
| J9874_RS20260 (J9874_04051) | 68871..69446 | + | 576 | WP_187486954.1 | helix-turn-helix transcriptional regulator | - |
| J9874_RS20265 (J9874_04052) | 69428..69898 | + | 471 | WP_187486953.1 | hypothetical protein | - |
| J9874_RS20270 (J9874_04053) | 69898..70284 | + | 387 | WP_225702118.1 | acyl-CoA thioesterase | - |
| J9874_RS20275 (J9874_04054) | 70317..71948 | - | 1632 | WP_225702119.1 | hypothetical protein | Relaxase |
| J9874_RS20280 (J9874_04055) | 72377..72673 | - | 297 | WP_225702120.1 | hypothetical protein | - |
| J9874_RS20285 (J9874_04056) | 73023..75572 | - | 2550 | WP_225702121.1 | SIR2 family protein | - |
| J9874_RS20290 (J9874_04057) | 75844..76125 | - | 282 | WP_225702175.1 | zincin-like metallopeptidase domain-containing protein | - |
| J9874_RS20295 | 76222..76335 | - | 114 | WP_225702176.1 | ArdC family protein | - |
| J9874_RS20300 | 76281..76460 | - | 180 | WP_225702122.1 | hypothetical protein | - |
| J9874_RS20305 (J9874_04058) | 76536..77138 | - | 603 | WP_225702123.1 | hypothetical protein | - |
| J9874_RS20310 (J9874_04059) | 77231..77857 | - | 627 | WP_225702124.1 | hypothetical protein | - |
| J9874_RS20315 (J9874_04060) | 77936..78304 | - | 369 | WP_225702125.1 | hypothetical protein | - |
| J9874_RS20320 (J9874_04061) | 78368..78694 | - | 327 | WP_225702126.1 | hypothetical protein | - |
| J9874_RS20325 (J9874_04063) | 79810..80706 | - | 897 | WP_225702177.1 | integrase domain-containing protein | - |
| J9874_RS20330 (J9874_04064) | 81646..82269 | + | 624 | WP_225702127.1 | hypothetical protein | - |
| J9874_RS20335 (J9874_04066) | 82841..83737 | + | 897 | WP_225702178.1 | RepB family plasmid replication initiator protein | - |
| J9874_RS20340 (J9874_04067) | 85732..85959 | - | 228 | WP_187487052.1 | plasmid partition protein ParG | - |
| J9874_RS20345 (J9874_04068) | 86054..86674 | - | 621 | WP_067437212.1 | Protein virC1 | VF |
| J9874_RS20350 | 87146..87292 | + | 147 | Protein_81 | transposase | - |
| J9874_RS20355 (J9874_04069) | 87980..88327 | + | 348 | Protein_82 | single-stranded DNA-binding protein | - |
| J9874_RS20360 (J9874_04070) | 88466..89002 | + | 537 | WP_225702128.1 | conjugation system SOS inhibitor PsiB family protein | - |
| J9874_RS20365 (J9874_04072) | 89592..93440 | + | 3849 | WP_225702129.1 | anti-phage defense-associated sirtuin Dsr1 | - |
| J9874_RS20370 (J9874_04073) | 93613..94239 | + | 627 | WP_225702130.1 | DUF2726 domain-containing protein | - |
| J9874_RS20375 | 95263..95496 | + | 234 | Protein_86 | plasmid SOS inhibition protein A | - |
| J9874_RS20380 (J9874_04074) | 95544..95690 | + | 147 | Protein_87 | theronine dehydrogenase | - |
| J9874_RS20385 | 95712..95885 | + | 174 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| J9874_RS20390 | 95958..96470 | + | 513 | WP_225702131.1 | hypothetical protein | - |
| J9874_RS20395 (J9874_04076) | 97816..97998 | + | 183 | WP_225702132.1 | hypothetical protein | - |
| J9874_RS20400 (J9874_04077) | 98027..98290 | + | 264 | WP_225702133.1 | hypothetical protein | - |
| J9874_RS20405 (J9874_04078) | 98348..98647 | - | 300 | WP_225702134.1 | XRE family transcriptional regulator | Antitoxin Detail |
| J9874_RS20410 (J9874_04079) | 98634..99005 | - | 372 | WP_225702135.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J9874_RS20415 (J9874_04080) | 99211..99606 | + | 396 | WP_225702136.1 | hypothetical protein | - |
| J9874_RS20420 (J9874_04081) | 99689..100816 | + | 1128 | WP_225702137.1 | hypothetical protein | - |
| J9874_RS20425 (J9874_04082) | 101410..101898 | - | 489 | WP_225702138.1 | hypothetical protein | - |
| J9874_RS20435 (J9874_04083) | 102634..102927 | - | 294 | WP_225702140.1 | hypothetical protein | - |
| J9874_RS20440 (J9874_04084) | 103032..103229 | - | 198 | WP_225702141.1 | hypothetical protein | - |
| J9874_RS20445 | 103865..104178 | + | 314 | Protein_99 | hypothetical protein | - |
| J9874_RS20450 (J9874_04086) | 104294..104560 | - | 267 | WP_225702142.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J9874_RS20455 (J9874_04087) | 104544..104768 | - | 225 | WP_225702143.1 | DUF6290 family protein | - |
| J9874_RS20460 | 105264..105620 | + | 357 | WP_225702144.1 | hypothetical protein | - |
| J9874_RS20465 (J9874_04091) | 105689..106393 | + | 705 | Protein_103 | IS6 family transposase IS15DI | Transposase |
| J9874_RS20470 | 106447..106750 | - | 304 | Protein_104 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|