NZ_CP0728821..183270

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 183270 bp
Accession: NZ_CP072882        Location: 1..183270         Organism: Enterococcus faecium strain F39       Replicon: plasmid pF39_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
J9541_RS11755 (J9541_11750) 1..1041 + 1041 WP_002326172.1 replication initiator protein A -
J9541_RS11760 (J9541_11755) 1865..2197 + 333 WP_002323647.1 type IV conjugative transfer system protein TraE -
J9541_RS11765 (J9541_11760) 2816..3157 + 342 WP_002295674.1 DUF5406 family protein -
J9541_RS11770 (J9541_11765) 3271..3510 + 240 WP_002295673.1 hypothetical protein -
J9541_RS11775 (J9541_11770) 3577..3786 + 210 WP_002295672.1 hypothetical protein -
J9541_RS11780 (J9541_11775) 3846..4517 + 672 WP_002324491.1 class A sortase -
J9541_RS11785 (J9541_11780) 4570..5256 + 687 Protein_6 pilin N-terminal domain-containing protein -
J9541_RS11790 (J9541_11785) 5256..5795 + 540 Protein_7 hypothetical protein VF
J9541_RS11795 (J9541_11790) 5808..6068 + 261 WP_002293489.1 hypothetical protein -
J9541_RS11800 (J9541_11795) 6065..7213 + 1149 Protein_9 isopeptide-forming domain-containing fimbrial protein -
J9541_RS11805 (J9541_11800) 7238..7723 + 486 Protein_10 hypothetical protein -
J9541_RS11810 (J9541_11805) 7810..8022 + 213 WP_016628103.1 hypothetical protein -
J9541_RS11815 (J9541_11810) 8083..9543 + 1461 WP_002305036.1 toprim domain-containing protein -
J9541_RS11820 (J9541_11815) 9554..11758 + 2205 WP_002326518.1 type IA DNA topoisomerase -
J9541_RS11825 (J9541_11820) 11774..11923 + 150 WP_002326517.1 hypothetical protein -
J9541_RS11830 (J9541_11825) 12004..12600 + 597 WP_002305039.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
J9541_RS11835 (J9541_11830) 12900..14090 + 1191 WP_002324630.1 IS256 family transposase ISLgar5 Transposase
J9541_RS11840 (J9541_11835) 14118..15248 - 1131 WP_002343759.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS11845 (J9541_11840) 15265..15648 - 384 WP_033603157.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS11850 (J9541_11845) 16138..16956 - 819 WP_002305041.1 MurR/RpiR family transcriptional regulator -
J9541_RS11855 (J9541_11850) 17117..17806 + 690 WP_002305042.1 N-acetylmannosamine-6-phosphate 2-epimerase -
J9541_RS11860 (J9541_11855) 17820..19322 + 1503 WP_218192812.1 PTS transporter subunit EIIC -
J9541_RS11865 (J9541_11860) 19335..19811 + 477 WP_002305045.1 PTS glucose transporter subunit IIA -
J9541_RS13170 20079..20165 + 87 Protein_23 IS200/IS605 family transposase -
J9541_RS11870 (J9541_11865) 20160..20363 + 204 Protein_24 hypothetical protein -
J9541_RS11875 (J9541_11870) 20522..20666 - 145 Protein_25 putative holin-like toxin -
J9541_RS11880 (J9541_11875) 20799..21059 + 261 WP_002326514.1 hypothetical protein -
J9541_RS11885 (J9541_11880) 21503..21709 + 207 WP_002305810.1 hypothetical protein -
J9541_RS11890 (J9541_11885) 21709..21960 + 252 WP_002343760.1 hypothetical protein -
J9541_RS11895 (J9541_11890) 21976..22413 + 438 WP_002343761.1 hypothetical protein -
J9541_RS11900 (J9541_11895) 22406..23113 + 708 WP_002322978.1 hypothetical protein -
J9541_RS11905 (J9541_11900) 23494..23673 + 180 Protein_31 hypothetical protein -
J9541_RS11910 (J9541_11905) 23767..23919 + 153 WP_224451579.1 type II toxin-antitoxin system HicA family toxin Toxin Detail
J9541_RS11915 (J9541_11910) 23953..24384 + 432 WP_002326154.1 type II toxin-antitoxin system HicB family antitoxin Antitoxin Detail
J9541_RS11920 (J9541_11915) 24565..25713 - 1149 WP_002287525.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS11925 (J9541_11920) 25730..26134 - 405 WP_002287522.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS11930 (J9541_11925) 26318..27295 - 978 WP_002326152.1 Choloylglycine hydrolase VF
J9541_RS11935 (J9541_11930) 27330..28634 - 1305 WP_113813881.1 conjugated bile salt MFS transporter -
J9541_RS11940 (J9541_11935) 29010..30182 + 1173 WP_218192811.1 IS256 family transposase IS256 Transposase
J9541_RS11945 (J9541_11940) 30278..31231 - 954 WP_002325884.1 IS30 family transposase IS1252 Transposase
J9541_RS11950 (J9541_11945) 31360..32043 - 684 Protein_40 IS6 family transposase IS1216V Transposase
J9541_RS11955 (J9541_11950) 32314..34491 - 2178 WP_187171042.1 alpha-galactosidase -
J9541_RS11960 (J9541_11955) 34567..35550 - 984 WP_123838795.1 Ribose operon repressor VF
J9541_RS11965 (J9541_11960) 35569..37017 - 1449 WP_255322584.1 sucrose-6-phosphate hydrolase -
J9541_RS11970 (J9541_11965) 37328..39277 + 1950 WP_123838793.1 sucrose-specific PTS transporter subunit IIBC -
J9541_RS11975 (J9541_11970) 39343..40962 + 1620 WP_123838792.1 alpha-glucosidase -
J9541_RS11980 (J9541_11975) 41223..41525 - 303 WP_002367825.1 hypothetical protein -
J9541_RS11985 (J9541_11980) 41506..43548 - 2043 WP_123838791.1 histidinol-phosphatase -
J9541_RS11990 (J9541_11985) 43671..44843 + 1173 WP_218192811.1 IS256 family transposase IS256 Transposase
J9541_RS11995 (J9541_11990) 45012..45269 + 258 WP_002324509.1 hypothetical protein -
J9541_RS12005 (J9541_12000) 46152..47471 + 1320 WP_000202380.1 IS1380 family transposase IS1678 Transposase
J9541_RS12010 (J9541_12005) 47707..48420 + 714 WP_218192813.1 IS982 family transposase ISEfm1 Transposase
J9541_RS12015 (J9541_12010) 48373..49326 - 954 WP_002325884.1 IS30 family transposase IS1252 Transposase
J9541_RS12020 (J9541_12015) 49424..50839 + 1416 WP_123838814.1 sucrose-specific PTS transporter subunit IIBC -
J9541_RS12025 (J9541_12020) 50855..52333 + 1479 WP_123838813.1 sucrose-6-phosphate hydrolase -
J9541_RS12030 (J9541_12025) 52434..53315 - 882 WP_161569115.1 ISL3 family transposase ISSpn3 Transposase
J9541_RS12035 (J9541_12030) 53960..55341 + 1382 Protein_56 IS3 family transposase ISLca1 Transposase
J9541_RS12040 (J9541_12035) 55575..56447 - 873 WP_002292418.1 ROK family protein -
J9541_RS12045 (J9541_12040) 56711..58659 - 1949 Protein_58 sucrose-specific PTS transporter subunit IIBC -
J9541_RS12050 (J9541_12045) 58844..60283 + 1440 WP_123838820.1 sucrose-6-phosphate hydrolase -
J9541_RS12055 (J9541_12050) 60285..61247 + 963 WP_123838819.1 LacI family DNA-binding transcriptional regulator -
J9541_RS12060 (J9541_12055) 61552..61911 - 360 Protein_61 IS3 family transposase ISEfa10 Transposase
J9541_RS12065 (J9541_12060) 62326..63279 + 954 WP_002325884.1 IS30 family transposase IS1252 Transposase
J9541_RS12075 (J9541_12070) 64804..65463 + 660 WP_255322585.1 type IA DNA topoisomerase -
J9541_RS12080 (J9541_12075) 65592..66545 - 954 WP_002325884.1 IS30 family transposase IS1252 Transposase
J9541_RS12085 (J9541_12080) 67293..67499 + 207 WP_123838806.1 hypothetical protein -
J9541_RS12090 (J9541_12085) 67604..68074 + 471 WP_123838807.1 JAB domain-containing protein -
J9541_RS12095 (J9541_12090) 68462..69340 + 879 WP_123838808.1 nucleotidyltransferase -
J9541_RS12100 (J9541_12095) 69318..69890 + 573 WP_123838809.1 SLATT domain-containing protein -
J9541_RS12105 (J9541_12100) 70294..70860 + 567 WP_123838810.1 Tn3 family transposase TnpR_ISAzs17 Transposase
J9541_RS12110 (J9541_12105) 71164..71418 + 255 WP_002322771.1 hypothetical protein -
J9541_RS12115 (J9541_12110) 71477..72154 - 678 WP_080011922.1 GntR family transcriptional regulator -
J9541_RS12120 (J9541_12115) 72339..73784 + 1446 WP_002323045.1 glycoside hydrolase family 1 protein -
J9541_RS12125 (J9541_12120) 73787..75088 + 1302 WP_002323046.1 PTS transporter subunit EIIC -
J9541_RS12130 (J9541_12125) 75302..75577 + 276 Protein_75 hypothetical protein -
J9541_RS12135 (J9541_12130) 75634..76542 - 909 WP_002295743.1 IS982 family transposase ISEfm1 Transposase
J9541_RS12140 (J9541_12135) 76765..77274 + 510 WP_123838826.1 hypothetical protein -
J9541_RS12145 (J9541_12140) 78664..79749 + 1086 WP_002301591.1 tyrosine recombinase XerS -
J9541_RS12150 (J9541_12145) 80104..80301 + 198 WP_002293041.1 cold-shock protein -
J9541_RS12155 (J9541_12150) 80584..81147 + 564 Protein_80 IS30 family transposase IS1062 Transposase
J9541_RS13175 81441..81941 - 501 WP_002334014.1 hypothetical protein -
J9541_RS12165 (J9541_12160) 81997..82551 - 555 WP_002301108.1 tyrosine-type recombinase/integrase -
J9541_RS12170 (J9541_12165) 83048..83956 + 909 WP_061573572.1 IS982 family transposase ISEfm1 Transposase
J9541_RS12175 (J9541_12170) 84370..84975 - 606 WP_002311756.1 Fic family protein -
J9541_RS12180 (J9541_12175) 85483..86523 + 1041 Protein_85 IS630 family transposase -
J9541_RS12185 (J9541_12180) 86730..87782 - 1053 WP_002291912.1 PTS sugar transporter subunit IIC -
J9541_RS12190 (J9541_12185) 87795..88733 - 939 WP_002291914.1 2-dehydropantoate 2-reductase -
J9541_RS12195 (J9541_12190) 89184..89603 - 420 Protein_88 hypothetical protein -
J9541_RS12200 (J9541_12195) 89678..90840 + 1163 WP_113836390.1 IS3 family transposase IS1485 Transposase
J9541_RS12205 (J9541_12200) 91164..92336 - 1173 WP_113836382.1 MFS transporter -
J9541_RS12210 (J9541_12205) 92339..94588 - 2250 WP_098188888.1 alpha-galactosidase -
J9541_RS12215 (J9541_12210) 94685..95539 - 855 WP_002334007.1 AraC family transcriptional regulator -
J9541_RS12220 (J9541_12215) 95626..96534 - 909 WP_218192807.1 IS982 family transposase ISEfm1 Transposase
J9541_RS12225 (J9541_12220) 97117..98436 + 1320 WP_000202380.1 IS1380 family transposase IS1678 Transposase
J9541_RS12230 (J9541_12225) 98726..99289 - 564 WP_002294754.1 restriction endonuclease subunit S -
J9541_RS12235 (J9541_12230) 99304..100347 - 1044 WP_218192808.1 hypothetical protein -
J9541_RS12240 (J9541_12235) 100480..100884 - 405 WP_002292291.1 organic hydroperoxide resistance protein -
J9541_RS12245 (J9541_12240) 101084..101332 - 249 WP_002346667.1 GlsB/YeaQ/YmgE family stress response membrane protein -
J9541_RS12250 (J9541_12245) 101512..102804 - 1293 WP_002346666.1 hypothetical protein -
J9541_RS12255 (J9541_12250) 102779..104551 - 1773 WP_218192809.1 AAA family ATPase -
J9541_RS12260 (J9541_12255) 104666..107815 - 3150 WP_218192810.1 HsdR family type I site-specific deoxyribonuclease -
J9541_RS12265 (J9541_12260) 107829..109052 - 1224 WP_104879370.1 restriction endonuclease subunit S -
J9541_RS12270 (J9541_12265) 109042..110637 - 1596 WP_125276242.1 type I restriction-modification system subunit M -
J9541_RS12275 (J9541_12270) 110829..111101 - 273 WP_225588186.1 hypothetical protein -
J9541_RS12280 (J9541_12275) 111253..111687 - 435 WP_233130730.1 hypothetical protein -
J9541_RS12285 (J9541_12280) 111709..112606 - 898 Protein_106 IS982 family transposase ISEfm1 Transposase
J9541_RS12290 (J9541_12285) 112733..112894 + 162 WP_002291320.1 hypothetical protein -
J9541_RS12295 (J9541_12290) 113215..114039 - 825 WP_002328392.1 endonuclease/exonuclease/phosphatase family protein -
J9541_RS12300 (J9541_12295) 114252..116414 - 2163 WP_002328393.1 PTS transporter subunit IIBC -
J9541_RS12305 (J9541_12300) 116695..118989 + 2295 WP_002328394.1 glycoside hydrolase family 65 protein -
J9541_RS12310 (J9541_12305) 118982..119647 + 666 WP_002328395.1 beta-phosphoglucomutase -
J9541_RS12315 (J9541_12310) 119640..120673 + 1034 Protein_112 galactose mutarotase -
J9541_RS12320 (J9541_12315) 120797..121294 - 498 Protein_113 peptidylprolyl isomerase -
J9541_RS12325 (J9541_12320) 122029..123117 - 1089 WP_002326561.1 hypothetical protein -
J9541_RS12330 (J9541_12325) 123264..124454 + 1191 WP_002324630.1 IS256 family transposase ISLgar5 Transposase
J9541_RS12335 (J9541_12330) 124575..125786 - 1212 WP_113795693.1 IS256 family transposase ISEf1 Transposase
J9541_RS12340 (J9541_12335) 125924..126868 - 945 WP_002326559.1 SDR family oxidoreductase -
J9541_RS12345 (J9541_12340) 126882..127541 - 660 WP_002295193.1 GTP cyclohydrolase I FolE -
J9541_RS12350 (J9541_12345) 127671..128429 + 759 WP_002336875.1 IS256 family transposase IS1201 Transposase
J9541_RS13180 128356..128652 + 297 WP_255322582.1 IS256 family transposase ISEfm2 Transposase
J9541_RS12355 (J9541_12350) 128687..128998 - 312 Protein_121 transposase -
J9541_RS12360 (J9541_12355) 129126..129716 - 591 WP_002326556.1 site-specific integrase -
J9541_RS12365 (J9541_12360) 129722..130555 - 834 WP_002326555.1 GIY-YIG nuclease family protein -
J9541_RS12370 (J9541_12365) 130736..131713 - 978 WP_002326554.1 toll/interleukin-1 receptor domain-containing protein -
J9541_RS12375 (J9541_12370) 131742..132038 - 297 Protein_125 restriction endonuclease subunit S -
J9541_RS12380 (J9541_12375) 132245..132457 - 213 WP_018345319.1 hypothetical protein -
J9541_RS12385 (J9541_12380) 132426..132785 - 360 WP_002331379.1 helix-turn-helix domain-containing protein -
J9541_RS12390 (J9541_12385) 132822..133148 + 327 WP_002367753.1 DNA-binding protein -
J9541_RS12395 (J9541_12390) 133138..133752 + 615 WP_000395511.1 bacitracin resistance transcriptional activator BcrR -
J9541_RS12400 (J9541_12395) 133935..134852 + 918 WP_002326551.1 ATP-binding cassette domain-containing protein -
J9541_RS12405 (J9541_12400) 134845..135594 + 750 WP_002326550.1 ABC transporter permease -
J9541_RS12410 (J9541_12405) 135594..136424 + 831 WP_000242080.1 undecaprenyl-diphosphate phosphatase -
J9541_RS12415 (J9541_12410) 136850..137272 + 423 WP_002326549.1 sigma-70 family RNA polymerase sigma factor -
J9541_RS12420 (J9541_12415) 137842..138003 + 162 WP_002326548.1 hypothetical protein -
J9541_RS12425 (J9541_12420) 138038..138607 + 570 Protein_135 Tn3 family transposase TnpR_Tn5403 Transposase
J9541_RS12435 (J9541_12430) 139992..141056 + 1065 Protein_137 recombinase family protein -
J9541_RS13185 141079..141372 - 294 WP_002326543.1 restriction endonuclease subunit S -
J9541_RS12440 (J9541_12435) 141362..141940 - 579 WP_002326542.1 restriction endonuclease subunit S -
J9541_RS12445 (J9541_12440) 141930..143525 - 1596 WP_002326541.1 type I restriction-modification system subunit M -
J9541_RS12450 (J9541_12445) 143649..144434 + 786 WP_002326540.1 SinI family restriction endonuclease -
J9541_RS12455 (J9541_12450) 144906..145304 + 399 Protein_142 IS30 family transposase IS1252 Transposase
J9541_RS12460 (J9541_12455) 145316..145825 - 510 Protein_143 IS30 family transposase IS1062 Transposase
J9541_RS12465 (J9541_12460) 145780..146925 - 1146 WP_229205995.1 S8 family serine peptidase -
J9541_RS12470 (J9541_12465) 146937..147665 - 729 WP_002295679.1 S8 family serine peptidase -
J9541_RS12475 (J9541_12470) 147925..148473 - 549 WP_002292681.1 hypothetical protein -
J9541_RS12480 (J9541_12475) 148474..149331 - 858 WP_002292680.1 ParA family protein -
J9541_RS12485 (J9541_12480) 149617..149823 - 207 WP_080115035.1 type II toxin-antitoxin system RelE/ParE family toxin -
J9541_RS12490 (J9541_12485) 150032..151936 - 1905 WP_002324484.1 heavy metal translocating P-type ATPase -
J9541_RS12495 (J9541_12490) 152134..152367 - 234 WP_002301447.1 heavy-metal-associated domain-containing protein -
J9541_RS12500 (J9541_12495) 152514..153368 - 855 WP_002300937.1 prolipoprotein diacylglyceryl transferase -
J9541_RS12505 (J9541_12500) 153353..153691 - 339 WP_002300938.1 hypothetical protein -
J9541_RS12510 (J9541_12505) 153919..154623 - 705 WP_002292156.1 Crp/Fnr family transcriptional regulator -
J9541_RS12515 (J9541_12510) 154768..155340 - 573 WP_002292150.1 DNA protection during starvation protein VF
J9541_RS12520 (J9541_12515) 155920..156873 + 954 WP_113805638.1 IS30 family transposase IS1252 Transposase
J9541_RS12525 (J9541_12520) 157018..158190 + 1173 WP_218192811.1 IS256 family transposase IS256 Transposase
J9541_RS12530 (J9541_12525) 158681..159040 + 360 WP_002303333.1 iron-sulfur cluster biosynthesis family protein -
J9541_RS12535 (J9541_12530) 159113..159676 - 564 Protein_158 HAD-IIB family hydrolase -
J9541_RS12540 (J9541_12535) 159753..160433 + 681 WP_001015311.1 IS6 family transposase IS1216E Transposase
J9541_RS12545 (J9541_12540) 160534..160851 - 318 WP_002300567.1 hypothetical protein -
J9541_RS12555 (J9541_12550) 161639..161722 + 84 WP_031929417.1 23S rRNA methyltransferase attenuator leader peptide ErmL -
J9541_RS12560 (J9541_12555) 161847..162584 + 738 WP_001038796.1 rRNA adenine N-6-methyltransferase ARG
J9541_RS12565 (J9541_12560) 162847..163227 - 381 Protein_163 toxin zeta -
J9541_RS12570 (J9541_12565) 163163..163738 + 576 WP_033603447.1 IS30 family transposase ISApl1 Transposase
J9541_RS12575 (J9541_12570) 163810..165423 - 1614 WP_002333004.1 hypothetical protein -
J9541_RS12580 (J9541_12575) 165447..166328 - 882 WP_002326774.1 ABC transporter ATP-binding protein NatA VF
J9541_RS12585 (J9541_12580) 166639..167235 + 597 WP_139914063.1 TetR/AcrR family transcriptional regulator -
J9541_RS12590 (J9541_12585) 167404..167808 - 405 Protein_168 DnaJ domain-containing protein -
J9541_RS12595 (J9541_12590) 167939..168802 - 864 WP_002333003.1 zeta toxin family protein Toxin Detail
J9541_RS12600 (J9541_12595) 168804..169076 - 273 WP_002333002.1 antitoxin Antitoxin Detail
J9541_RS12605 (J9541_12600) 169094..169309 - 216 WP_001835296.1 peptide-binding protein -
J9541_RS12610 (J9541_12605) 169401..170297 - 897 WP_194175303.1 ParA family protein -
J9541_RS12615 (J9541_12610) 170400..170660 - 261 Protein_173 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
J9541_RS12620 (J9541_12615) 170830..171567 - 738 WP_001038796.1 rRNA adenine N-6-methyltransferase ARG
J9541_RS12625 (J9541_12620) 171692..171775 - 84 WP_001814874.1 23S rRNA methyltransferase attenuation leader peptide -
J9541_RS12630 (J9541_12625) 171898..172065 - 168 Protein_176 peptide-binding protein -
J9541_RS12635 (J9541_12630) 172182..172583 - 402 WP_255322583.1 hypothetical protein -
J9541_RS12640 (J9541_12635) 172993..173673 + 681 WP_001015311.1 IS6 family transposase IS1216E Transposase
J9541_RS12645 (J9541_12640) 174014..174298 - 285 WP_002303603.1 YjcQ family protein -
J9541_RS12650 (J9541_12645) 174319..175689 - 1371 WP_002324486.1 DUF4357 domain-containing protein -
J9541_RS12655 (J9541_12650) 175908..176816 + 909 WP_002295743.1 IS982 family transposase ISEfm1 Transposase
J9541_RS12660 (J9541_12655) 177450..177767 - 318 WP_002290394.1 type II toxin-antitoxin system RelE/ParE family toxin -
J9541_RS12665 (J9541_12660) 177768..178022 - 255 WP_002323399.1 hypothetical protein -
J9541_RS12670 (J9541_12665) 178381..178785 + 405 WP_002287522.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS12675 (J9541_12670) 178802..179950 + 1149 WP_002287525.1 IS200-IS605 family transposase ISEfa4 Transposase
J9541_RS13190 180173..180313 - 141 WP_002290398.1 hypothetical protein -
J9541_RS12690 (J9541_12685) 180951..181037 - 87 Protein_187 single-stranded DNA-binding protein -
J9541_RS12695 (J9541_12690) 181443..182402 - 960 WP_002303791.1 IS30 family transposase IS6770 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance