MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69302 bp
Accession: NZ_CP072804 Location: 1..69302 Organism: Escherichia coli strain PK5074 Replicon: plasmid pPK5074-69kb
Accession: NZ_CP072804 Location: 1..69302 Organism: Escherichia coli strain PK5074 Replicon: plasmid pPK5074-69kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8617_RS24530 (J8617_24515) | 1..861 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| J8617_RS24535 (J8617_24520) | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| J8617_RS24540 (J8617_24525) | 2463..3428 | + | 966 | WP_000725192.1 | ParB family protein | - |
| J8617_RS24545 (J8617_24530) | 3693..3917 | + | 225 | WP_094653748.1 | IS6 family transposase IS15 | Transposase |
| J8617_RS24550 (J8617_24535) | 3929..4633 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS24555 (J8617_24540) | 6083..6643 | - | 561 | WP_080833098.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J8617_RS24560 (J8617_24545) | 6683..7387 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J8617_RS24565 (J8617_24550) | 7399..8211 | - | 813 | WP_065799592.1 | hypothetical protein | ARG |
| J8617_RS24570 (J8617_24555) | 8296..9134 | - | 839 | Protein_8 | Streptomycin 3''-adenylyltransferase | ARG |
| J8617_RS24575 (J8617_24560) | 9280..9882 | + | 603 | Protein_9 | IS91 family transposase ISAzo26 | Transposase |
| J8617_RS24580 (J8617_24565) | 9935..10468 | - | 534 | Protein_10 | IS6 family transposase IS26 | Transposase |
| J8617_RS24585 (J8617_24570) | 10522..11226 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS24590 (J8617_24575) | 11387..12043 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| J8617_RS24595 (J8617_24580) | 12460..13164 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J8617_RS24600 (J8617_24585) | 13189..14439 | + | 1251 | WP_040178261.1 | IS1380 family transposase ISEcp1 | Transposase |
| J8617_RS24605 (J8617_24590) | 14679..15320 | + | 642 | WP_130526124.1 | MBL fold metallo-hydrolase | - |
| J8617_RS24610 (J8617_24595) | 15561..15974 | - | 414 | WP_210388686.1 | hypothetical protein | - |
| J8617_RS24615 (J8617_24600) | 16143..16946 | + | 804 | WP_130526125.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| J8617_RS24620 (J8617_24605) | 16946..17778 | + | 833 | Protein_18 | hypothetical protein | ARG |
| J8617_RS26410 | 17864..17977 | - | 114 | Protein_19 | hypothetical protein | - |
| J8617_RS24625 (J8617_24610) | 18114..18930 | + | 817 | Protein_20 | Aminoglycoside 3'-phosphotransferase | ARG |
| J8617_RS24630 (J8617_24615) | 19084..19995 | - | 912 | Protein_21 | C45 family autoproteolytic acyltransferase/hydolase | - |
| J8617_RS24635 (J8617_24620) | 20029..20367 | - | 339 | Protein_22 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| J8617_RS24640 (J8617_24625) | 20420..21123 | - | 704 | Protein_23 | IS6 family transposase IS26 | Transposase |
| J8617_RS24645 (J8617_24630) | 21114..21254 | + | 141 | WP_107524640.1 | DUF4752 family protein | - |
| J8617_RS24650 (J8617_24635) | 21251..21541 | + | 291 | WP_048659782.1 | hypothetical protein | - |
| J8617_RS24655 (J8617_24640) | 21611..21877 | + | 267 | WP_000946114.1 | hypothetical protein | - |
| J8617_RS24660 (J8617_24645) | 21880..22128 | + | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| J8617_RS24665 (J8617_24650) | 22240..22632 | + | 393 | WP_000506718.1 | S24 family peptidase | - |
| J8617_RS24670 (J8617_24655) | 22705..22926 | + | 222 | WP_033545779.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| J8617_RS24675 (J8617_24660) | 22926..23306 | + | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J8617_RS24680 (J8617_24665) | 23553..24053 | - | 501 | Protein_31 | Tn3 family transposase | - |
| J8617_RS24685 (J8617_24670) | 24119..24823 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J8617_RS24690 (J8617_24675) | 24877..25047 | + | 171 | Protein_33 | hypothetical protein | - |
| J8617_RS24695 (J8617_24680) | 25239..25718 | + | 480 | WP_130560492.1 | type 3 dihydrofolate reductase | - |
| J8617_RS24700 (J8617_24685) | 25739..25918 | + | 180 | WP_000998543.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| J8617_RS24705 (J8617_24690) | 26017..26436 | - | 420 | WP_044866469.1 | hypothetical protein | - |
| J8617_RS24710 (J8617_24695) | 26537..27234 | + | 698 | WP_223429336.1 | IS1 family transposase | - |
| J8617_RS24715 (J8617_24700) | 27435..28295 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| J8617_RS24720 (J8617_24705) | 28605..29087 | - | 483 | WP_210388685.1 | hypothetical protein | - |
| J8617_RS24725 (J8617_24710) | 29204..30052 | - | 849 | WP_001058012.1 | 3'-5' exonuclease | - |
| J8617_RS24730 (J8617_24715) | 30098..30376 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| J8617_RS24735 (J8617_24720) | 30376..30645 | - | 270 | WP_021546940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| J8617_RS24740 (J8617_24725) | 31392..32003 | + | 612 | Protein_43 | IS3 family transposase ISRaq1 | Transposase |
| J8617_RS24745 (J8617_24730) | 32035..32214 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| J8617_RS24750 (J8617_24735) | 32438..32755 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| J8617_RS24755 (J8617_24740) | 32824..33750 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| J8617_RS24760 (J8617_24745) | 33760..34359 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| J8617_RS24765 (J8617_24750) | 34356..34940 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| J8617_RS24770 (J8617_24755) | 34959..38636 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| J8617_RS24775 (J8617_24760) | 38653..40416 | + | 1764 | WP_063090599.1 | DUF262 domain-containing protein | - |
| J8617_RS24780 (J8617_24765) | 40432..44130 | + | 3699 | WP_112919545.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| J8617_RS24785 (J8617_24770) | 44130..46799 | + | 2670 | WP_072752446.1 | BREX-1 system phosphatase PglZ type A | - |
| J8617_RS24790 (J8617_24775) | 46859..48904 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| J8617_RS24795 (J8617_24780) | 49012..49290 | - | 279 | Protein_54 | IS3 family transposase | - |
| J8617_RS24800 (J8617_24785) | 49580..50584 | - | 1005 | WP_210388682.1 | IS110 family transposase IS5075 | Transposase |
| J8617_RS24805 (J8617_24790) | 50889..51586 | + | 698 | WP_224656898.1 | IS1 family transposase | - |
| J8617_RS24810 (J8617_24795) | 51711..52145 | - | 435 | Protein_57 | GNAT family N-acetyltransferase | - |
| J8617_RS24815 (J8617_24800) | 52165..52410 | + | 246 | Protein_58 | IS3 family transposase ISEhe3 | Transposase |
| J8617_RS24820 (J8617_24805) | 52480..53184 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS24825 (J8617_24810) | 53356..54384 | - | 1029 | WP_039002937.1 | tyrosine-type recombinase/integrase | - |
| J8617_RS24830 (J8617_24815) | 54778..55253 | + | 476 | Protein_61 | IS1 family transposase IS1A | Transposase |
| J8617_RS24835 (J8617_24820) | 55530..55667 | - | 138 | Protein_62 | IS110 family transposase | - |
| J8617_RS24840 (J8617_24825) | 55703..56671 | + | 969 | WP_072199635.1 | IS5 family transposase IS903B | Transposase |
| J8617_RS24845 (J8617_24830) | 56730..57128 | + | 399 | WP_024210314.1 | cag pathogenicity island Cag12 family protein | - |
| J8617_RS24850 (J8617_24835) | 57219..57536 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| J8617_RS24855 (J8617_24840) | 57563..57898 | + | 336 | WP_001776113.1 | hypothetical protein | - |
| J8617_RS24860 (J8617_24845) | 57874..58182 | + | 309 | WP_001776114.1 | hypothetical protein | - |
| J8617_RS24865 (J8617_24850) | 58179..60380 | + | 2202 | WP_001776115.1 | type IA DNA topoisomerase | - |
| J8617_RS24870 (J8617_24855) | 60377..60769 | + | 393 | WP_001776116.1 | H-NS family nucleoid-associated regulatory protein | - |
| J8617_RS24875 (J8617_24860) | 61477..63384 | + | 1908 | WP_001776117.1 | type IV secretion system DNA-binding domain-containing protein | - |
| J8617_RS24880 (J8617_24865) | 63399..64145 | + | 747 | WP_210388683.1 | MobC family replication-relaxation protein | - |
| J8617_RS24885 (J8617_24870) | 64138..64665 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| J8617_RS24890 (J8617_24875) | 64697..65128 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| J8617_RS24895 (J8617_24880) | 65260..65436 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| J8617_RS24900 (J8617_24885) | 65608..66573 | - | 966 | WP_001743098.1 | zincin-like metallopeptidase domain-containing protein | - |
| J8617_RS24905 (J8617_24890) | 67025..67135 | + | 111 | Protein_76 | peptidase | - |
| J8617_RS24910 (J8617_24895) | 67252..67440 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| J8617_RS24915 (J8617_24900) | 67450..68649 | + | 1200 | WP_206059993.1 | IS91 family transposase ISSbo1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|