MGE detailed information
MGE type: Genomic_island MGE length: 50449 bp
Accession: NZ_CP072608 Location: 2478242..2528690 Organism: Desulfovibrio desulfuricans strain L4 Replicon: chromosome
Accession: NZ_CP072608 Location: 2478242..2528690 Organism: Desulfovibrio desulfuricans strain L4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8J02_RS10615 (J8J02_10615) | 2473988..2474707 | - | 720 | WP_022658325.1 | flagellar basal body L-ring protein FlgH | - |
| J8J02_RS10620 (J8J02_10620) | 2474735..2475964 | - | 1230 | WP_022658324.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| J8J02_RS10625 (J8J02_10625) | 2476110..2476895 | - | 786 | WP_022658323.1 | flagellar basal-body rod protein FlgG | - |
| J8J02_RS10630 (J8J02_10630) | 2476955..2477749 | - | 795 | WP_022658322.1 | flagellar basal-body rod protein FlgF | - |
| J8J02_RS10635 (J8J02_10635) | 2478242..2479477 | + | 1236 | WP_096152604.1 | ISL3 family transposase ISKox3 | Transposase |
| J8J02_RS10645 (J8J02_10645) | 2480092..2481861 | + | 1770 | WP_209817807.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J8J02_RS10650 (J8J02_10650) | 2482048..2483010 | + | 963 | WP_209817809.1 | hypothetical protein | - |
| J8J02_RS15180 | 2483144..2483317 | + | 174 | Protein_2081 | IS3 family transposase ISNeu4 | Transposase |
| J8J02_RS10660 (J8J02_10660) | 2483832..2486462 | - | 2631 | WP_209817813.1 | AAA family ATPase | - |
| J8J02_RS10665 (J8J02_10665) | 2486518..2486697 | - | 180 | WP_209817815.1 | hypothetical protein | - |
| J8J02_RS10670 (J8J02_10670) | 2487249..2487401 | - | 153 | WP_209817817.1 | hypothetical protein | - |
| J8J02_RS10675 (J8J02_10675) | 2487633..2489276 | - | 1644 | WP_209817819.1 | hypothetical protein | - |
| J8J02_RS10680 (J8J02_10680) | 2489303..2489698 | - | 396 | WP_209817820.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| J8J02_RS10685 (J8J02_10685) | 2489695..2489931 | - | 237 | WP_209817822.1 | hypothetical protein | - |
| J8J02_RS10690 (J8J02_10690) | 2489994..2491028 | - | 1035 | WP_209817824.1 | DUF3150 domain-containing protein | - |
| J8J02_RS10695 (J8J02_10695) | 2491038..2492063 | - | 1026 | WP_209817825.1 | AAA family ATPase | - |
| J8J02_RS10700 (J8J02_10700) | 2492164..2492364 | - | 201 | WP_209817827.1 | hypothetical protein | - |
| J8J02_RS10705 (J8J02_10705) | 2492424..2492720 | - | 297 | WP_209817829.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J8J02_RS10710 (J8J02_10710) | 2492710..2492955 | - | 246 | WP_209817830.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| J8J02_RS10715 (J8J02_10715) | 2493023..2493385 | - | 363 | WP_209817832.1 | hypothetical protein | - |
| J8J02_RS10720 (J8J02_10720) | 2493402..2494565 | - | 1164 | WP_209817834.1 | hypothetical protein | - |
| J8J02_RS10725 (J8J02_10725) | 2494634..2495335 | - | 702 | WP_209817836.1 | ERF family protein | - |
| J8J02_RS10730 (J8J02_10730) | 2495729..2496229 | - | 501 | WP_209817838.1 | A24 family peptidase | - |
| J8J02_RS10735 (J8J02_10735) | 2496345..2496917 | - | 573 | WP_209817840.1 | Type IV secretion system protein virB1 | VF |
| J8J02_RS10740 (J8J02_10740) | 2496922..2498124 | - | 1203 | WP_209817842.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| J8J02_RS10745 (J8J02_10745) | 2498121..2498711 | - | 591 | WP_209817844.1 | hypothetical protein | - |
| J8J02_RS10750 (J8J02_10750) | 2498870..2499436 | - | 567 | WP_209817846.1 | hypothetical protein | - |
| J8J02_RS10755 (J8J02_10755) | 2499674..2500654 | - | 981 | WP_209817848.1 | type II secretion system F family protein | - |
| J8J02_RS10760 (J8J02_10760) | 2500732..2502273 | - | 1542 | WP_209817850.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| J8J02_RS10765 (J8J02_10765) | 2502278..2503183 | - | 906 | WP_209817851.1 | hypothetical protein | - |
| J8J02_RS10770 (J8J02_10770) | 2503173..2504384 | - | 1212 | WP_209817852.1 | type 4b pilus protein PilO2 | - |
| J8J02_RS10775 (J8J02_10775) | 2504391..2505905 | - | 1515 | WP_209817854.1 | secretin N-terminal domain-containing protein | - |
| J8J02_RS10780 (J8J02_10780) | 2505907..2506296 | - | 390 | WP_209817855.1 | hypothetical protein | VF |
| J8J02_RS10785 (J8J02_10785) | 2506478..2507542 | + | 1065 | WP_209817857.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| J8J02_RS10790 (J8J02_10790) | 2508301..2509377 | - | 1077 | WP_209817859.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| J8J02_RS10795 (J8J02_10795) | 2509578..2510138 | - | 561 | WP_209817861.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J8J02_RS10800 (J8J02_10800) | 2510374..2510787 | - | 414 | WP_209817863.1 | hypothetical protein | - |
| J8J02_RS10805 (J8J02_10805) | 2511372..2513786 | - | 2415 | WP_209817865.1 | bifunctional DNA primase/polymerase | - |
| J8J02_RS10810 (J8J02_10810) | 2514056..2514967 | - | 912 | WP_209817866.1 | hypothetical protein | - |
| J8J02_RS10815 (J8J02_10815) | 2514970..2516022 | - | 1053 | WP_209817868.1 | hypothetical protein | - |
| J8J02_RS10820 (J8J02_10820) | 2516590..2516982 | - | 393 | WP_209817870.1 | hypothetical protein | - |
| J8J02_RS10825 (J8J02_10825) | 2517297..2517509 | - | 213 | WP_209817872.1 | hypothetical protein | - |
| J8J02_RS10830 (J8J02_10830) | 2517606..2517836 | + | 231 | WP_209817874.1 | hypothetical protein | - |
| J8J02_RS10835 (J8J02_10835) | 2518008..2519000 | - | 993 | WP_209817876.1 | putative glycosyltransferase | VF |
| J8J02_RS10840 (J8J02_10840) | 2519152..2520711 | - | 1560 | WP_209817878.1 | glucosyltransferase domain-containing protein | - |
| J8J02_RS10845 (J8J02_10845) | 2521191..2522303 | - | 1113 | WP_209817880.1 | acyltransferase | - |
| J8J02_RS10850 (J8J02_10850) | 2523088..2524056 | - | 969 | WP_096152589.1 | IS30 family transposase ISSba17 | Transposase |
| J8J02_RS10855 (J8J02_10855) | 2524270..2527011 | - | 2742 | WP_209817882.1 | DUF927 domain-containing protein | - |
| J8J02_RS10860 (J8J02_10860) | 2527175..2527405 | - | 231 | WP_209817884.1 | hypothetical protein | - |
| J8J02_RS10865 (J8J02_10865) | 2527696..2527944 | + | 249 | WP_209817886.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| J8J02_RS10870 (J8J02_10870) | 2527947..2528207 | + | 261 | WP_209817888.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| J8J02_RS10875 (J8J02_10875) | 2528878..2530302 | - | 1425 | WP_022657535.1 | sodium:solute symporter family protein | - |
| J8J02_RS10880 (J8J02_10880) | 2530536..2531783 | - | 1248 | WP_209817890.1 | Glu/Leu/Phe/Val dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|