MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 41278 bp
Accession: NZ_CP072569 Location: 1..41278 Organism: Enterococcus faecium strain VB3895 Replicon: plasmid pVB3895_p2
Accession: NZ_CP072569 Location: 1..41278 Organism: Enterococcus faecium strain VB3895 Replicon: plasmid pVB3895_p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J7291_RS14505 (J7291_14510) | 1..1041 | + | 1041 | WP_000997689.1 | replication initiator protein A | - |
| J7291_RS14510 (J7291_14515) | 1657..2337 | - | 681 | WP_002287920.1 | IS6-like element IS1216 family transposase | - |
| J7291_RS14515 (J7291_14520) | 2483..2566 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| J7291_RS14520 (J7291_14525) | 2691..3428 | + | 738 | WP_001038792.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| J7291_RS14525 (J7291_14530) | 3598..3858 | + | 261 | Protein_4 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| J7291_RS14530 (J7291_14535) | 4021..4686 | + | 666 | Protein_5 | IS1182-like element IS1182 family transposase | - |
| J7291_RS14535 (J7291_14540) | 4722..4967 | + | 246 | WP_000567888.1 | single-stranded DNA-binding protein | - |
| J7291_RS14540 (J7291_14545) | 5070..5939 | + | 870 | WP_000228166.1 | nucleotidyltransferase domain-containing protein | - |
| J7291_RS14545 (J7291_14550) | 5920..6654 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| J7291_RS14550 (J7291_14555) | 6687..7595 | + | 909 | WP_001255866.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
| J7291_RS14555 (J7291_14560) | 7592..8134 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| J7291_RS14560 (J7291_14565) | 8227..9021 | + | 795 | WP_001096887.1 | aminoglycoside O-phosphotransferase APH(3')-IIIa | - |
| J7291_RS14565 (J7291_14570) | 9297..9602 | + | 306 | Protein_12 | HTH domain-containing protein | - |
| J7291_RS14570 (J7291_14575) | 9653..10333 | - | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
| J7291_RS14575 (J7291_14580) | 10409..10666 | + | 258 | Protein_14 | helix-turn-helix domain-containing protein | - |
| J7291_RS14580 (J7291_14585) | 10880..11575 | + | 696 | WP_001280781.1 | vancomycin resistance response regulator transcription factor VanR-A | - |
| J7291_RS14585 (J7291_14590) | 11553..12707 | + | 1155 | WP_002305818.1 | VanA-type vancomycin resistance histidine kinase VanS | - |
| J7291_RS14590 (J7291_14595) | 12805..14097 | - | 1293 | WP_000122610.1 | ISL3-like element IS1251 family transposase | - |
| J7291_RS14595 (J7291_14600) | 14429..15397 | + | 969 | WP_001059542.1 | D-lactate dehydrogenase VanH-A | - |
| J7291_RS14600 (J7291_14605) | 15390..16421 | + | 1032 | WP_001079843.1 | D-alanine--(R)-lactate ligase VanA | - |
| J7291_RS14605 (J7291_14610) | 16427..17035 | + | 609 | WP_000402348.1 | D-Ala-D-Ala dipeptidase VanX-A | - |
| J7291_RS14610 (J7291_14615) | 17463..18374 | + | 912 | WP_000732308.1 | VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase | - |
| J7291_RS14615 (J7291_14620) | 18527..19012 | + | 486 | WP_000516404.1 | glycopeptide resistance protein VanZ-A | - |
| J7291_RS14620 (J7291_14625) | 19299..19628 | - | 330 | WP_000754864.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J7291_RS14625 (J7291_14630) | 19933..20262 | + | 330 | WP_000629052.1 | hypothetical protein | - |
| J7291_RS14630 (J7291_14635) | 20252..20539 | + | 288 | WP_000312842.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J7291_RS14635 (J7291_14640) | 20818..21381 | - | 564 | WP_000017403.1 | recombinase family protein | - |
| J7291_RS14640 (J7291_14645) | 22024..22977 | + | 954 | WP_000222572.1 | IS30 family transposase | - |
| J7291_RS14645 (J7291_14650) | 22955..24430 | + | 1476 | WP_000443455.1 | RNA-directed DNA polymerase | - |
| J7291_RS14650 (J7291_14655) | 24768..26246 | + | 1479 | WP_224752222.1 | type I restriction-modification system subunit M | - |
| J7291_RS14655 (J7291_14660) | 26269..26949 | - | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
| J7291_RS14660 (J7291_14665) | 27025..27732 | + | 708 | Protein_31 | replication initiation protein | - |
| J7291_RS14665 (J7291_14670) | 27869..28285 | - | 417 | WP_001232859.1 | hypothetical protein | - |
| J7291_RS14670 (J7291_14675) | 28288..28572 | - | 285 | WP_000353844.1 | hypothetical protein | - |
| J7291_RS14675 (J7291_14680) | 28938..29162 | + | 225 | WP_000410576.1 | hypothetical protein | - |
| J7291_RS14685 (J7291_14690) | 30285..30965 | - | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
| J7291_RS14690 (J7291_14695) | 31041..31607 | + | 567 | Protein_36 | hypothetical protein | - |
| J7291_RS15370 | 31772..31972 | + | 201 | WP_001033544.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| J7291_RS14695 (J7291_14700) | 31988..32167 | + | 180 | WP_001120991.1 | hypothetical protein | - |
| J7291_RS14700 (J7291_14705) | 32298..32567 | + | 270 | WP_000388479.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J7291_RS14705 (J7291_14710) | 32560..32817 | + | 258 | WP_000588503.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| J7291_RS14710 (J7291_14715) | 33455..34063 | + | 609 | WP_224752223.1 | hypothetical protein | - |
| J7291_RS14715 (J7291_14720) | 34197..35516 | + | 1320 | WP_000202380.1 | IS1380-like element IS1678 family transposase | - |
| J7291_RS14720 (J7291_14725) | 35729..35962 | + | 234 | WP_002296232.1 | hypothetical protein | - |
| J7291_RS14725 (J7291_14730) | 36127..36741 | - | 615 | WP_001261742.1 | recombinase family protein | - |
| J7291_RS14730 (J7291_14735) | 37191..38516 | + | 1326 | WP_000969590.1 | Y-family DNA polymerase | - |
| J7291_RS14735 (J7291_14740) | 38509..38859 | + | 351 | WP_000568378.1 | hypothetical protein | - |
| J7291_RS14740 (J7291_14745) | 38856..39035 | + | 180 | WP_001021554.1 | hypothetical protein | - |
| J7291_RS14745 (J7291_14750) | 39171..39461 | + | 291 | WP_000026576.1 | hypothetical protein | - |
| J7291_RS14750 (J7291_14755) | 39829..40617 | + | 789 | WP_000101106.1 | AAA family ATPase | - |
| J7291_RS14755 (J7291_14760) | 40604..40930 | + | 327 | WP_000796719.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Enterococcus faecium | Non-Mobilizable plasmid | TA6115 | NC_014959 | 1..39032 | 0.006 |