MGE detailed information
MGE type: Prophage MGE length: 66531 bp
Accession: NZ_CP072455 Location: 1357211..1423741 Organism: Xenorhabdus budapestensis strain C-7-2 Replicon: chromosome
Accession: NZ_CP072455 Location: 1357211..1423741 Organism: Xenorhabdus budapestensis strain C-7-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGO23_RS06385 (HGO23_06385) | 1353033..1353713 | + | 681 | WP_099137244.1 | ribonuclease III | - |
| HGO23_RS06390 (HGO23_06390) | 1353710..1354615 | + | 906 | WP_099137245.1 | GTPase Era | - |
| HGO23_RS06395 (HGO23_06395) | 1354625..1355356 | + | 732 | WP_209028340.1 | DNA repair protein RecO | - |
| HGO23_RS06400 (HGO23_06400) | 1355425..1356156 | + | 732 | WP_099137247.1 | pyridoxine 5'-phosphate synthase | - |
| HGO23_RS06405 (HGO23_06405) | 1356156..1356536 | + | 381 | WP_099137248.1 | holo-ACP synthase | - |
| HGO23_RS06410 (HGO23_06410) | 1356735..1356995 | - | 261 | WP_209028341.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| HGO23_RS06415 (HGO23_06415) | 1357211..1358608 | + | 1398 | WP_209028342.1 | hypothetical protein ; Integrase | Integrase |
| HGO23_RS06420 (HGO23_06420) | 1358811..1359131 | - | 321 | WP_209028343.1 | hypothetical protein | - |
| HGO23_RS06425 (HGO23_06425) | 1359128..1359478 | - | 351 | WP_209028344.1 | hypothetical protein | - |
| HGO23_RS06430 (HGO23_06430) | 1359475..1360068 | - | 594 | WP_209028345.1 | KilA-N domain-containing protein | - |
| HGO23_RS06435 (HGO23_06435) | 1360167..1360316 | + | 150 | WP_209028346.1 | hypothetical protein | - |
| HGO23_RS06440 (HGO23_06440) | 1360288..1360512 | - | 225 | WP_209028335.1 | hypothetical protein | - |
| HGO23_RS06445 (HGO23_06445) | 1360509..1360853 | - | 345 | WP_209028334.1 | hypothetical protein | - |
| HGO23_RS06450 (HGO23_06450) | 1360866..1361468 | - | 603 | WP_209028333.1 | hypothetical protein | - |
| HGO23_RS06455 (HGO23_06455) | 1361468..1362337 | - | 870 | WP_209028332.1 | ORF6N domain-containing protein | - |
| HGO23_RS06460 (HGO23_06460) | 1362337..1362555 | - | 219 | WP_209028347.1 | hypothetical protein | - |
| HGO23_RS06465 (HGO23_06465) | 1362555..1362746 | - | 192 | WP_244967908.1 | PerC family transcriptional regulator | - |
| HGO23_RS06470 (HGO23_06470) | 1362730..1363011 | - | 282 | WP_209028330.1 | hypothetical protein | - |
| HGO23_RS06475 (HGO23_06475) | 1363137..1363313 | - | 177 | WP_209028329.1 | hypothetical protein | - |
| HGO23_RS06480 (HGO23_06480) | 1363294..1363494 | - | 201 | WP_209028348.1 | hypothetical protein | - |
| HGO23_RS06485 (HGO23_06485) | 1363512..1363736 | - | 225 | WP_209028327.1 | hypothetical protein | - |
| HGO23_RS06490 (HGO23_06490) | 1363853..1364065 | - | 213 | WP_209028349.1 | hypothetical protein | - |
| HGO23_RS06495 (HGO23_06495) | 1364116..1364289 | - | 174 | WP_209028350.1 | hypothetical protein | - |
| HGO23_RS06500 (HGO23_06500) | 1364359..1364523 | - | 165 | WP_209028351.1 | hypothetical protein | - |
| HGO23_RS06505 (HGO23_06505) | 1364855..1365361 | - | 507 | WP_209028352.1 | hypothetical protein | - |
| HGO23_RS06510 (HGO23_06510) | 1365358..1365789 | - | 432 | WP_209028353.1 | hypothetical protein | - |
| HGO23_RS06515 (HGO23_06515) | 1365978..1366370 | - | 393 | WP_244967909.1 | helix-turn-helix domain-containing protein | - |
| HGO23_RS06520 (HGO23_06520) | 1366493..1366714 | + | 222 | WP_209028354.1 | helix-turn-helix transcriptional regulator | - |
| HGO23_RS06525 (HGO23_06525) | 1366704..1366988 | + | 285 | WP_099137275.1 | hypothetical protein | - |
| HGO23_RS06530 (HGO23_06530) | 1367239..1367613 | + | 375 | WP_209028355.1 | hypothetical protein | - |
| HGO23_RS06535 (HGO23_06535) | 1367680..1367844 | + | 165 | WP_209028356.1 | hypothetical protein | - |
| HGO23_RS06540 (HGO23_06540) | 1367838..1368818 | + | 981 | Protein_1296 | DEAD/DEAH box helicase | - |
| HGO23_RS06545 (HGO23_06545) | 1368907..1369497 | + | 591 | WP_099137273.1 | HNH endonuclease signature motif containing protein | - |
| HGO23_RS06550 (HGO23_06550) | 1369490..1370281 | + | 792 | WP_209028357.1 | ATP-dependent helicase | - |
| HGO23_RS06555 (HGO23_06555) | 1370278..1371255 | + | 978 | WP_209028358.1 | toprim domain-containing protein | - |
| HGO23_RS06560 (HGO23_06560) | 1371255..1371674 | + | 420 | WP_209028359.1 | antiterminator Q family protein | - |
| HGO23_RS06565 (HGO23_06565) | 1372086..1372598 | + | 513 | WP_209028360.1 | AidA/PixA family protein | - |
| HGO23_RS06570 (HGO23_06570) | 1372785..1373060 | - | 276 | WP_209028361.1 | hypothetical protein | - |
| HGO23_RS06575 (HGO23_06575) | 1373451..1374584 | + | 1134 | WP_209028362.1 | hypothetical protein | - |
| HGO23_RS06580 (HGO23_06580) | 1374600..1375109 | + | 510 | WP_209028363.1 | hypothetical protein | - |
| HGO23_RS06585 (HGO23_06585) | 1375271..1375594 | + | 324 | WP_244590026.1 | phage holin, lambda family | - |
| HGO23_RS06590 (HGO23_06590) | 1375591..1375992 | + | 402 | WP_209028364.1 | structural protein | - |
| HGO23_RS06595 (HGO23_06595) | 1376073..1376291 | + | 219 | WP_244590034.1 | phage antirepressor N-terminal domain-containing protein | - |
| HGO23_RS06600 (HGO23_06600) | 1376293..1376772 | + | 480 | WP_209028365.1 | lysis protein | - |
| HGO23_RS06605 (HGO23_06605) | 1376871..1378223 | + | 1353 | WP_209028366.1 | SIR2 family protein | - |
| HGO23_RS06610 (HGO23_06610) | 1378346..1378594 | + | 249 | WP_209028367.1 | hypothetical protein | - |
| HGO23_RS06615 (HGO23_06615) | 1378599..1378904 | - | 306 | WP_209028310.1 | hypothetical protein | - |
| HGO23_RS06620 (HGO23_06620) | 1378987..1379646 | + | 660 | WP_209026919.1 | hypothetical protein | - |
| HGO23_RS06625 (HGO23_06625) | 1379687..1380064 | + | 378 | WP_209028309.1 | hypothetical protein | - |
| HGO23_RS06630 (HGO23_06630) | 1380310..1380471 | + | 162 | WP_209026921.1 | hypothetical protein | - |
| HGO23_RS06635 (HGO23_06635) | 1380614..1381195 | + | 582 | WP_209026922.1 | IS66 family transposase ISGka5 | Transposase |
| HGO23_RS06640 (HGO23_06640) | 1381170..1383146 | + | 1977 | WP_209028368.1 | phage terminase large subunit family protein | - |
| HGO23_RS06645 (HGO23_06645) | 1383156..1383404 | + | 249 | WP_209028369.1 | gpW family head-tail joining protein | - |
| HGO23_RS06650 (HGO23_06650) | 1383404..1385056 | + | 1653 | WP_209028370.1 | phage portal protein | - |
| HGO23_RS06655 (HGO23_06655) | 1385056..1385886 | + | 831 | WP_209028724.1 | S49 family peptidase | - |
| HGO23_RS06660 (HGO23_06660) | 1385912..1386355 | + | 444 | WP_209028371.1 | hypothetical protein | - |
| HGO23_RS06665 (HGO23_06665) | 1386355..1386747 | + | 393 | WP_099137477.1 | head decoration protein | - |
| HGO23_RS06670 (HGO23_06670) | 1386862..1387908 | + | 1047 | WP_209028372.1 | major capsid protein | - |
| HGO23_RS06675 (HGO23_06675) | 1387910..1388239 | + | 330 | WP_209028373.1 | hypothetical protein | - |
| HGO23_RS06680 (HGO23_06680) | 1388229..1388558 | + | 330 | WP_099137475.1 | hypothetical protein | - |
| HGO23_RS06685 (HGO23_06685) | 1388555..1389094 | + | 540 | WP_099137474.1 | ATP-binding protein | - |
| HGO23_RS06690 (HGO23_06690) | 1389099..1389284 | + | 186 | WP_099137473.1 | DUF2635 domain-containing protein | - |
| HGO23_RS06695 (HGO23_06695) | 1389284..1390774 | + | 1491 | WP_099137472.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| HGO23_RS06700 (HGO23_06700) | 1390784..1391152 | + | 369 | WP_209026930.1 | phage tail tube protein | - |
| HGO23_RS06705 (HGO23_06705) | 1391162..1391458 | + | 297 | WP_209028374.1 | phage tail assembly protein | - |
| HGO23_RS06710 (HGO23_06710) | 1391576..1393486 | + | 1911 | WP_209028375.1 | hypothetical protein | - |
| HGO23_RS06715 (HGO23_06715) | 1393817..1394302 | + | 486 | WP_099137483.1 | hypothetical protein | - |
| HGO23_RS06720 (HGO23_06720) | 1394443..1394706 | + | 264 | WP_099137431.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HGO23_RS06725 (HGO23_06725) | 1394693..1394974 | + | 282 | WP_099137432.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HGO23_RS06730 (HGO23_06730) | 1395077..1396486 | + | 1410 | WP_209028376.1 | DNA circularization N-terminal domain-containing protein | - |
| HGO23_RS06735 (HGO23_06735) | 1396483..1397589 | + | 1107 | WP_209026933.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| HGO23_RS06740 (HGO23_06740) | 1397573..1398160 | + | 588 | WP_209026934.1 | phage baseplate assembly protein | - |
| HGO23_RS06745 (HGO23_06745) | 1398157..1398603 | + | 447 | WP_099137534.1 | phage GP46 family protein | - |
| HGO23_RS06750 (HGO23_06750) | 1398593..1399732 | + | 1140 | WP_209026935.1 | baseplate J/gp47 family protein | - |
| HGO23_RS06755 (HGO23_06755) | 1399729..1400325 | + | 597 | WP_209026936.1 | YmfQ family protein | - |
| HGO23_RS06760 (HGO23_06760) | 1400384..1401292 | + | 909 | WP_209026937.1 | tail fiber protein | - |
| HGO23_RS19615 (HGO23_06765) | 1401295..1401744 | + | 450 | WP_280529521.1 | tail fiber assembly protein | - |
| HGO23_RS06770 (HGO23_06770) | 1401921..1403123 | - | 1203 | WP_209028377.1 | hypothetical protein | - |
| HGO23_RS06775 (HGO23_06775) | 1403107..1403400 | - | 294 | WP_209028725.1 | nucleoid-associated protein | - |
| HGO23_RS06780 (HGO23_06780) | 1403464..1404175 | + | 712 | Protein_1344 | IS1 family transposase IS1N | Transposase |
| HGO23_RS06785 (HGO23_06785) | 1404170..1404913 | - | 744 | WP_209028378.1 | nucleoid-associated protein | - |
| HGO23_RS06790 (HGO23_06790) | 1405224..1405607 | - | 384 | WP_209028379.1 | LecA/PA-IL family lectin | - |
| HGO23_RS06795 (HGO23_06795) | 1406543..1407445 | + | 903 | WP_099137250.1 | DNA-3-methyladenine glycosylase 2 | - |
| HGO23_RS06800 (HGO23_06800) | 1408500..1409627 | + | 1128 | Protein_1348 | ISAs1 family transposase ISKpn9 | Transposase |
| HGO23_RS06810 (HGO23_06810) | 1411281..1411526 | + | 246 | WP_209028380.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| HGO23_RS06815 (HGO23_06815) | 1411529..1411783 | + | 255 | WP_209028381.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| HGO23_RS06820 (HGO23_06820) | 1411893..1412915 | + | 1023 | WP_209027922.1 | IS110 family transposase ISSde4 | Transposase |
| HGO23_RS06825 (HGO23_06825) | 1413143..1414027 | - | 885 | Protein_1353 | IS982 family transposase ISPlu6 | Transposase |
| HGO23_RS06830 (HGO23_06830) | 1414471..1414797 | - | 327 | Protein_1354 | ISAs1 family transposase ISKpn31 | Transposase |
| HGO23_RS06835 (HGO23_06835) | 1414821..1415531 | - | 711 | Protein_1355 | IS110 family transposase ISPlu13 | Transposase |
| HGO23_RS06840 (HGO23_06840) | 1415777..1416736 | + | 960 | WP_209028382.1 | IS110 family transposase ISBcen8 | Transposase |
| HGO23_RS06845 (HGO23_06845) | 1416882..1417526 | + | 645 | WP_244967911.1 | HD domain-containing protein | - |
| HGO23_RS06850 (HGO23_06850) | 1417587..1418078 | + | 492 | WP_209028384.1 | tRNA adenosine(34) deaminase TadA | - |
| HGO23_RS06855 (HGO23_06855) | 1418101..1419561 | - | 1461 | WP_209028385.1 | membrane-bound lytic murein transglycosylase MltF | - |
| HGO23_RS06860 (HGO23_06860) | 1419827..1423741 | + | 3915 | WP_209028726.1 | phosphoribosylformylglycinamidine synthase | - |
| HGO23_RS06865 (HGO23_06865) | 1424596..1426035 | + | 1440 | WP_169923065.1 | HAMP domain-containing sensor histidine kinase | - |
| HGO23_RS06870 (HGO23_06870) | 1426040..1426969 | + | 930 | WP_244967912.1 | two-component system QseEF-associated lipoprotein QseG | - |
| HGO23_RS06875 (HGO23_06875) | 1426966..1428303 | + | 1338 | WP_209028386.1 | two-component system response regulator GlrR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|