MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP072054 Location: 4237929..4247279 Organism: Escherichia coli strain K1508 Replicon: chromosome
Accession: NZ_CP072054 Location: 4237929..4247279 Organism: Escherichia coli strain K1508 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5N95_RS20315 (4234660) | 4234660..4235379 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| J5N95_RS20320 (4235376) | 4235376..4237007 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| J5N95_RS20325 (4237188) | 4237188..4237418 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J5N95_RS20330 (4237430) | 4237430..4237702 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| J5N95_RS20335 (4237929) | 4237929..4238225 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J5N95_RS20340 (4238253) | 4238253..4238426 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J5N95_RS20345 (4238545) | 4238545..4240062 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J5N95_RS20350 (4240299) | 4240299..4241756 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J5N95_RS20355 (4241815) | 4241815..4243962 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J5N95_RS20360 (4244042) | 4244042..4245376 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J5N95_RS20365 (4245741) | 4245741..4247279 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J5N95_RS20375 (4248078) | 4248078..4248653 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| J5N95_RS20380 (4248690) | 4248690..4250387 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| J5N95_RS20385 (4250363) | 4250363..4250701 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| J5N95_RS20390 (4250817) | 4250817..4252118 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |