MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 40984 bp
Accession: NZ_CP071960 Location: 1..40984 Organism: Enterococcus faecium strain VB13828 Replicon: plasmid p2VB13828
Accession: NZ_CP071960 Location: 1..40984 Organism: Enterococcus faecium strain VB13828 Replicon: plasmid p2VB13828
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4767_RS14910 (J4767_14910) | 1..1041 | + | 1041 | WP_000997689.1 | replication initiator protein A | - |
| J4767_RS14915 (J4767_14915) | 1657..2337 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| J4767_RS14920 (J4767_14920) | 2483..2566 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| J4767_RS14925 (J4767_14925) | 2691..3428 | + | 738 | WP_001038792.1 | rRNA adenine N-6-methyltransferase | ARG |
| J4767_RS14930 (J4767_14930) | 3598..3858 | + | 261 | Protein_4 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| J4767_RS14935 (J4767_14935) | 4021..4686 | + | 666 | Protein_5 | IS1182 family transposase IS1182 | Transposase |
| J4767_RS14940 (J4767_14940) | 4722..4967 | + | 246 | WP_000567888.1 | single-stranded DNA-binding protein | - |
| J4767_RS14945 (J4767_14945) | 5070..5939 | + | 870 | WP_000228166.1 | nucleotidyltransferase domain-containing protein | - |
| J4767_RS14950 (J4767_14950) | 5920..6654 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| J4767_RS14955 (J4767_14955) | 6687..7595 | + | 909 | WP_001255866.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| J4767_RS14960 (J4767_14960) | 7592..8134 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| J4767_RS14965 (J4767_14965) | 8227..9021 | + | 795 | WP_001096887.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| J4767_RS14970 (J4767_14970) | 9297..9839 | + | 543 | WP_002321977.1 | HTH domain-containing protein | - |
| J4767_RS14975 (J4767_14975) | 9869..10549 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| J4767_RS14980 (J4767_14980) | 10566..11042 | + | 477 | WP_029756586.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| J4767_RS14985 (J4767_14985) | 11256..11951 | + | 696 | WP_001280781.1 | Transcriptional regulatory protein WalR | VF |
| J4767_RS14990 (J4767_14990) | 11929..13083 | + | 1155 | WP_002305818.1 | VanA-type vancomycin resistance histidine kinase VanS | - |
| J4767_RS14995 (J4767_14995) | 13181..14473 | - | 1293 | WP_000122610.1 | ISL3 family transposase IS1251 | Transposase |
| J4767_RS15000 (J4767_15000) | 14805..15773 | + | 969 | WP_001059542.1 | D-specific alpha-keto acid dehydrogenase | ARG |
| J4767_RS15005 (J4767_15005) | 15766..16797 | + | 1032 | WP_001079843.1 | Vancomycin/teicoplanin A-type resistance protein VanA | ARG |
| J4767_RS15010 (J4767_15010) | 16803..17411 | + | 609 | WP_000402348.1 | D-alanyl-D-alanine dipeptidase | ARG |
| J4767_RS15015 (J4767_15015) | 17839..18750 | + | 912 | WP_000732308.1 | VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase | - |
| J4767_RS15020 (J4767_15020) | 18903..19388 | + | 486 | WP_000516404.1 | glycopeptide resistance protein VanZ-A | - |
| J4767_RS15025 (J4767_15025) | 19675..20004 | - | 330 | WP_000754864.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J4767_RS15030 (J4767_15030) | 20309..20638 | + | 330 | WP_000629052.1 | hypothetical protein | - |
| J4767_RS15035 (J4767_15035) | 20628..20915 | + | 288 | WP_000312842.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J4767_RS15040 (J4767_15040) | 21194..21757 | - | 564 | WP_000017403.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| J4767_RS15045 (J4767_15045) | 22400..23353 | + | 954 | WP_000222572.1 | IS30 family transposase IS1252 | Transposase |
| J4767_RS15050 (J4767_15050) | 23331..24806 | + | 1476 | WP_000443455.1 | RNA-directed DNA polymerase | - |
| J4767_RS15055 (J4767_15055) | 25144..25941 | + | 798 | Protein_29 | class I SAM-dependent DNA methyltransferase | - |
| J4767_RS15060 (J4767_15060) | 25981..26661 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| J4767_RS15065 (J4767_15065) | 26737..27444 | + | 708 | Protein_31 | replication initiation protein | - |
| J4767_RS15070 (J4767_15070) | 27581..27997 | - | 417 | WP_208572921.1 | hypothetical protein | - |
| J4767_RS15075 (J4767_15075) | 27999..28280 | - | 282 | WP_125394241.1 | hypothetical protein | - |
| J4767_RS15080 (J4767_15080) | 28646..28870 | + | 225 | WP_000410576.1 | hypothetical protein | - |
| J4767_RS15090 (J4767_15090) | 29991..30671 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| J4767_RS15095 (J4767_15095) | 30747..31313 | + | 567 | Protein_36 | hypothetical protein | - |
| J4767_RS15640 | 31478..31678 | + | 201 | WP_001033544.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| J4767_RS15100 (J4767_15100) | 31694..31873 | + | 180 | WP_001120991.1 | hypothetical protein | - |
| J4767_RS15105 (J4767_15105) | 32004..32273 | + | 270 | WP_000388479.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J4767_RS15110 (J4767_15110) | 32266..32523 | + | 258 | WP_000588503.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| J4767_RS15115 (J4767_15115) | 32982..33137 | + | 156 | WP_002347142.1 | hypothetical protein | - |
| J4767_RS15120 (J4767_15120) | 33161..33769 | + | 609 | WP_224752223.1 | hypothetical protein | - |
| J4767_RS15125 (J4767_15125) | 33903..35222 | + | 1320 | WP_000202380.1 | IS1380 family transposase IS1678 | Transposase |
| J4767_RS15130 (J4767_15130) | 35435..35668 | + | 234 | WP_002296232.1 | hypothetical protein | - |
| J4767_RS15135 (J4767_15135) | 35833..36447 | - | 615 | WP_001261742.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| J4767_RS15140 (J4767_15140) | 36897..38222 | + | 1326 | WP_000969590.1 | Y-family DNA polymerase | - |
| J4767_RS15145 (J4767_15145) | 38215..38565 | + | 351 | WP_000568378.1 | hypothetical protein | - |
| J4767_RS15150 (J4767_15150) | 38562..38741 | + | 180 | WP_001021554.1 | hypothetical protein | - |
| J4767_RS15155 (J4767_15155) | 38877..39167 | + | 291 | WP_000026576.1 | hypothetical protein | - |
| J4767_RS15160 (J4767_15160) | 39535..40323 | + | 789 | WP_000101106.1 | Sporulation initiation inhibitor protein Soj | VF |
| J4767_RS15165 (J4767_15165) | 40310..40636 | + | 327 | WP_000796719.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Enterococcus faecium | Non-Mobilizable plasmid | TA6115 | NC_014959 | 1..39032 | 0.005 |