MGE detailed information
MGE type: Genomic_island MGE length: 45384 bp
Accession: NZ_CP071954 Location: 4683677..4729060 Organism: Escherichia coli strain SB0258h1 Replicon: chromosome
Accession: NZ_CP071954 Location: 4683677..4729060 Organism: Escherichia coli strain SB0258h1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5X85_RS22765 (4679196) | 4679196..4680392 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| J5X85_RS22770 (4680677) | 4680677..4680958 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| J5X85_RS22775 (4680980) | 4680980..4681765 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| J5X85_RS22780 (4681826) | 4681826..4683343 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| J5X85_RS22785 (4683367) | 4683367..4683666 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| J5X85_RS22790 (4683677) | 4683677..4684252 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| J5X85_RS22795 (4684301) | 4684301..4686853 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| J5X85_RS22800 (4686962) | 4686962..4687879 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| J5X85_RS22805 (4688016) | 4688016..4688921 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| J5X85_RS22810 (4689407) | 4689407..4689946 | + | 540 | WP_001332064.1 | maturase | - |
| J5X85_RS22815 (4690013) | 4690013..4690495 | + | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| J5X85_RS22820 (4691045) | 4691045..4692307 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| J5X85_RS22825 (4692324) | 4692324..4693379 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| J5X85_RS22830 (4693508) | 4693508..4694659 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| J5X85_RS22835 (4694704) | 4694704..4695249 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| J5X85_RS25630 (4695606) | 4695606..4695791 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| J5X85_RS25635 (4695742) | 4695742..4695951 | - | 210 | WP_001332061.1 | Regulatory protein SoxS | VF |
| J5X85_RS22850 (4697131) | 4697131..4697370 | - | 240 | WP_231532428.1 | HTH-type transcriptional regulator TtgR | VF |
| J5X85_RS22855 (4697470) | 4697470..4698618 | - | 1149 | Protein_4526 | Multidrug resistance protein MexB | VF |
| J5X85_RS22860 (4698718) | 4698718..4698978 | + | 261 | Protein_4527 | IS3 family transposase IS2 | Transposase |
| J5X85_RS25640 (4698970) | 4698970..4699032 | - | 63 | Protein_4528 | IS3 family transposase IS2 | Transposase |
| J5X85_RS25750 (4699161) | 4699161..4699286 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| J5X85_RS22870 (4699283) | 4699283..4699516 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| J5X85_RS22875 (4699585) | 4699585..4700160 | - | 576 | Protein_4531 | hypothetical protein | - |
| J5X85_RS22880 (4700407) | 4700407..4700973 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| J5X85_RS22885 (4702283) | 4702283..4703377 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| J5X85_RS22890 (4703396) | 4703396..4704646 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| J5X85_RS22895 (4704730) | 4704730..4705665 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| J5X85_RS22900 (4705658) | 4705658..4706593 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| J5X85_RS22905 (4707129) | 4707129..4707581 | - | 453 | WP_000558152.1 | acyltransferase | - |
| J5X85_RS22910 (4708102) | 4708102..4708833 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| J5X85_RS22915 (4710286) | 4710286..4711509 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| J5X85_RS22920 (4711610) | 4711610..4712494 | + | 885 | WP_001116795.1 | YfjP family GTPase | - |
| J5X85_RS22925 (4712697) | 4712697..4713377 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| J5X85_RS22930 (4713528) | 4713528..4714205 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| J5X85_RS22935 (4714211) | 4714211..4714444 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| J5X85_RS22940 (4714534) | 4714534..4715352 | + | 819 | WP_104214106.1 | DUF932 domain-containing protein | - |
| J5X85_RS22945 (4715618) | 4715618..4716097 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| J5X85_RS22950 (4716112) | 4716112..4716588 | + | 477 | WP_001186193.1 | RadC family protein | - |
| J5X85_RS22955 (4716675) | 4716675..4716896 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| J5X85_RS22960 (4716976) | 4716976..4717344 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J5X85_RS22965 (4717433) | 4717433..4717810 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| J5X85_RS22970 (4717807) | 4717807..4718004 | + | 198 | Protein_4550 | DUF5983 family protein | - |
| J5X85_RS22975 (4718032) | 4718032..4718229 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| J5X85_RS22980 (4718314) | 4718314..4718874 | + | 561 | Protein_4552 | DUF4942 domain-containing protein | - |
| J5X85_RS22985 (4719709) | 4719709..4721247 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J5X85_RS22990 (4721613) | 4721613..4722947 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J5X85_RS22995 (4723027) | 4723027..4725174 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| J5X85_RS23000 (4725233) | 4725233..4726690 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| J5X85_RS23005 (4726927) | 4726927..4728444 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| J5X85_RS23010 (4728563) | 4728563..4728736 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J5X85_RS23015 (4728764) | 4728764..4729060 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J5X85_RS23020 (4729289) | 4729289..4729561 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J5X85_RS23025 (4729573) | 4729573..4729803 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J5X85_RS23030 (4729983) | 4729983..4731614 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| J5X85_RS23035 (4731611) | 4731611..4732330 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|