MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 51771 bp
Accession: NZ_CP071871 Location: 963639..1015409 Organism: Streptococcus pneumoniae strain BVJ1JL Replicon: chromosome
Accession: NZ_CP071871 Location: 963639..1015409 Organism: Streptococcus pneumoniae strain BVJ1JL Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN057_RS04975 (JN057_01022) | 958870..959169 | + | 300 | WP_061370803.1 | hypothetical protein | - |
| JN057_RS04980 (JN057_01023) | 959159..959647 | + | 489 | WP_048791736.1 | hypothetical protein | - |
| JN057_RS04985 (JN057_01024) | 959647..961524 | + | 1878 | WP_061370808.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JN057_RS04990 (JN057_01025) | 961545..961787 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| JN057_RS04995 (JN057_01026) | 961804..962658 | + | 855 | WP_001054257.1 | conjugal transfer protein TrbL | - |
| JN057_RS05000 (JN057_01027) | 962712..963071 | + | 360 | WP_001097589.1 | PrgI family protein | - |
| JN057_RS05005 (JN057_01028) | 963022..965379 | + | 2358 | WP_061370802.1 | AAA family ATPase | - |
| JN057_RS05010 (JN057_01029) | 965391..968204 | + | 2814 | WP_000653464.1 | phage tail tip lysozyme | - |
| JN057_RS05015 (JN057_01030) | 968609..969826 | - | 1218 | WP_001291561.1 | tyrosine-type recombinase/integrase | - |
| JN057_RS05020 (JN057_01031) | 969908..970111 | - | 204 | WP_000814511.1 | excisionase | - |
| JN057_RS11310 | 970095..970346 | + | 252 | WP_001845478.1 | hypothetical protein | - |
| JN057_RS05025 (JN057_01033) | 970572..970802 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| JN057_RS05030 (JN057_01034) | 970799..971221 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| JN057_RS05035 (JN057_01035) | 971726..972079 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| JN057_RS05040 | 972139..972306 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| JN057_RS05045 (JN057_01036) | 972425..974344 | - | 1920 | WP_000691729.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| JN057_RS05050 | 974360..974476 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| JN057_RS05055 (JN057_01038) | 974721..975653 | - | 933 | WP_001224318.1 | conjugal transfer protein | - |
| JN057_RS05060 (JN057_01039) | 975650..976651 | - | 1002 | WP_000769868.1 | bifunctional lysozyme/C40 family peptidase | - |
| JN057_RS05065 (JN057_01040) | 976648..978825 | - | 2178 | WP_050236901.1 | hypothetical protein | - |
| JN057_RS05070 (JN057_01041) | 978828..981275 | - | 2448 | WP_016502687.1 | ATP-binding protein | - |
| JN057_RS05075 (JN057_01042) | 981259..981651 | - | 393 | WP_241489562.1 | conjugal transfer protein | - |
| JN057_RS05080 (JN057_01043) | 981740..982237 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| JN057_RS05085 (JN057_01044) | 982354..982575 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| JN057_RS05090 (JN057_01045) | 982618..983823 | - | 1206 | WP_000398284.1 | MobT family relaxase | - |
| JN057_RS05095 | 983846..983998 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| JN057_RS05100 (JN057_01046) | 984001..985386 | - | 1386 | WP_000813488.1 | FtsK/SpoIIIE domain-containing protein | - |
| JN057_RS05105 (JN057_01047) | 985415..985801 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| JN057_RS05110 (JN057_01048) | 985817..986131 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| JN057_RS05115 (JN057_01049) | 987008..987418 | + | 411 | WP_000387512.1 | thrombospondin type 3 repeat-containing protein | - |
| JN057_RS05120 (JN057_01050) | 987466..993684 | + | 6219 | WP_208093495.1 | DEAD/DEAH box helicase family protein | - |
| JN057_RS05125 (JN057_01051) | 993759..994043 | + | 285 | WP_000969641.1 | DUF5962 family protein | - |
| JN057_RS05130 (JN057_01052) | 994057..994353 | + | 297 | WP_000998891.1 | DUF5966 family protein | - |
| JN057_RS05135 (JN057_01053) | 994367..994564 | - | 198 | WP_004249782.1 | hypothetical protein | - |
| JN057_RS05140 (JN057_01054) | 994724..995365 | + | 642 | WP_000933082.1 | hypothetical protein | - |
| JN057_RS05145 (JN057_01055) | 995375..996460 | + | 1086 | WP_001019160.1 | toprim domain-containing protein | - |
| JN057_RS05150 (JN057_01056) | 996511..996744 | + | 234 | WP_000152419.1 | DUF5965 family protein | - |
| JN057_RS05155 (JN057_01057) | 996741..997124 | + | 384 | WP_000159216.1 | DUF5945 family protein | - |
| JN057_RS05160 (JN057_01058) | 997163..997438 | + | 276 | WP_000495442.1 | hypothetical protein | - |
| JN057_RS05165 (JN057_01059) | 997520..998152 | + | 633 | WP_000424174.1 | DUF3990 domain-containing protein | - |
| JN057_RS05170 (JN057_01060) | 998143..998370 | + | 228 | WP_000301902.1 | hypothetical protein | - |
| JN057_RS05175 (JN057_01061) | 998523..998999 | + | 477 | WP_000579623.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| JN057_RS05180 (JN057_01062) | 998999..999757 | + | 759 | WP_000405369.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| JN057_RS05185 (JN057_01063) | 1000233..1000754 | + | 522 | WP_243749657.1 | hypothetical protein | - |
| JN057_RS05190 (JN057_01064) | 1000895..1002241 | + | 1347 | WP_001808790.1 | IS1380-like element ISSpn5 family transposase | - |
| JN057_RS05195 | 1002508..1002729 | + | 222 | WP_050284786.1 | hypothetical protein | - |
| JN057_RS05200 (JN057_01065) | 1002968..1003216 | + | 249 | WP_001814254.1 | hypothetical protein | - |
| JN057_RS05205 (JN057_01066) | 1003387..1004106 | + | 720 | Protein_1042 | type A chloramphenicol O-acetyltransferase | - |
| JN057_RS05210 (JN057_01068) | 1004902..1005825 | - | 924 | WP_000417606.1 | protein rep | - |
| JN057_RS05215 (JN057_01069) | 1006029..1006859 | + | 831 | Protein_1044 | alpha-amylase family glycosyl hydrolase | - |
| JN057_RS05220 (JN057_01070) | 1007127..1007582 | + | 456 | WP_025173400.1 | hypothetical protein | - |
| JN057_RS05225 (JN057_01071) | 1007858..1008334 | + | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| JN057_RS05230 (JN057_01072) | 1008334..1009101 | + | 768 | WP_061638910.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| JN057_RS05235 (JN057_01073) | 1009105..1010436 | + | 1332 | WP_061370832.1 | hypothetical protein | - |
| JN057_RS05240 (JN057_01074) | 1010429..1011151 | + | 723 | WP_061370831.1 | hypothetical protein | - |
| JN057_RS05245 (JN057_01075) | 1011123..1013783 | + | 2661 | WP_061370834.1 | AAA family ATPase | - |
| JN057_RS05250 (JN057_01076) | 1014150..1014509 | + | 360 | WP_061370830.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| JN057_RS05255 (JN057_01077) | 1014519..1014884 | + | 366 | WP_061370829.1 | MobC family plasmid mobilization relaxosome protein | - |
| JN057_RS05260 (JN057_01078) | 1014871..1015560 | + | 690 | Protein_1053 | relaxase/mobilization nuclease domain-containing protein | - |
| JN057_RS05265 (JN057_01079) | 1015560..1015871 | + | 312 | Protein_1054 | hypothetical protein | - |
| JN057_RS05270 | 1016085..1016276 | + | 192 | WP_061370828.1 | hypothetical protein | - |
| JN057_RS05275 (JN057_01082) | 1016571..1016789 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| JN057_RS05280 (JN057_01083) | 1017182..1018207 | + | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| JN057_RS05285 (JN057_01084) | 1018197..1019204 | + | 1008 | WP_001244693.1 | iron ABC transporter permease | - |
| JN057_RS05290 (JN057_01085) | 1019204..1020211 | + | 1008 | WP_001180357.1 | iron ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|