MGE detailed information

MGE type: Conjugative plasmid        MGE length: 160574 bp
Accession: NZ_CP071736        Location: 1..160574         Organism: Klebsiella variicola strain KGB_1       Replicon: plasmid pKGB1a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KGB1_RS27410 (KGB1_27405) 1..1011 + 1011 WP_060657146.1 RepB family plasmid replication initiator protein -
KGB1_RS27415 (KGB1_27410) 1728..2468 - 741 WP_080895881.1 tyrosine-type recombinase/integrase -
KGB1_RS27420 2838..3131 - 294 Protein_2 type II toxin-antitoxin system RelE/ParE family toxin -
KGB1_RS27425 (KGB1_27415) 3118..3384 - 267 Protein_3 type II toxin-antitoxin system ParD family antitoxin -
KGB1_RS27430 (KGB1_27420) 3604..5145 - 1542 WP_211754306.1 hypothetical protein -
KGB1_RS27435 (KGB1_27425) 5625..5915 - 291 WP_142792194.1 hypothetical protein -
KGB1_RS27440 6064..6309 - 246 Protein_6 hypothetical protein -
KGB1_RS27445 (KGB1_27430) 6472..7560 + 1089 WP_211754326.1 transcriptional repressor PifC -
KGB1_RS27450 (KGB1_27435) 7561..9768 + 2208 WP_211754307.1 P-loop NTPase fold protein -
KGB1_RS27455 (KGB1_27440) 10724..11218 - 495 WP_253616146.1 hypothetical protein -
KGB1_RS27465 (KGB1_27450) 12685..12915 - 231 WP_211754309.1 hypothetical protein -
KGB1_RS27470 (KGB1_27455) 12899..13468 - 570 WP_211754310.1 hypothetical protein -
KGB1_RS27475 (KGB1_27460) 14292..14582 - 291 WP_001535717.1 hypothetical protein -
KGB1_RS27480 (KGB1_27465) 14582..15712 - 1131 WP_086071022.1 DUF4238 domain-containing protein -
KGB1_RS27485 (KGB1_27470) 15742..16845 - 1104 WP_211754311.1 nucleotide-binding protein -
KGB1_RS27490 (KGB1_27475) 17175..17423 + 249 WP_149063770.1 hypothetical protein -
KGB1_RS27495 (KGB1_27480) 17420..17992 + 573 WP_211754312.1 hypothetical protein -
KGB1_RS27500 (KGB1_27485) 18023..18517 + 495 WP_253616151.1 DNA-binding protein -
KGB1_RS27505 (KGB1_27490) 18567..18770 + 204 WP_032432068.1 HHA domain-containing protein -
KGB1_RS27510 (KGB1_27495) 18784..19014 + 231 WP_202173308.1 hypothetical protein -
KGB1_RS27515 (KGB1_27500) 19058..19252 - 195 WP_110188634.1 hypothetical protein -
KGB1_RS27520 (KGB1_27510) 19670..20443 - 774 WP_211754314.1 hypothetical protein -
KGB1_RS27525 (KGB1_27515) 20465..20773 - 309 WP_211754315.1 hypothetical protein -
KGB1_RS27530 (KGB1_27520) 20981..23656 - 2676 Protein_24 Tn3 family transposase ISEc63 Transposase
KGB1_RS27535 (KGB1_27525) 23817..24374 + 558 WP_211754316.1 Tn3 family transposase TnpR_Tn3 Transposase
KGB1_RS27540 (KGB1_27530) 24391..25254 + 864 WP_211754317.1 DUF4231 domain-containing protein -
KGB1_RS27545 (KGB1_27535) 25293..25697 - 405 WP_071846040.1 TIR domain-containing protein -
KGB1_RS27550 (KGB1_27540) 25993..26391 - 399 WP_211754318.1 TIR domain-containing protein -
KGB1_RS27555 (KGB1_27545) 26396..27643 - 1248 WP_228298559.1 tetratricopeptide repeat protein -
KGB1_RS27560 (KGB1_27550) 28014..28294 + 281 Protein_30 hypothetical protein VF
KGB1_RS27565 (KGB1_27555) 28894..30033 + 1140 WP_228298560.1 nucleotide-binding protein -
KGB1_RS27570 (KGB1_27560) 30612..30728 - 117 Protein_32 SOS response-associated peptidase -
KGB1_RS27575 (KGB1_27565) 31552..31821 - 270 Protein_33 transposase domain-containing protein -
KGB1_RS27580 (KGB1_27570) 31820..32071 - 252 Protein_34 IS66 family transposase ISSgsp1 Transposase
KGB1_RS27585 (KGB1_27575) 32122..32469 - 348 WP_193168565.1 IS66 family transposase ISEc8 Transposase
KGB1_RS27590 33053..33166 - 114 Protein_36 transcriptional regulator -
KGB1_RS27595 (KGB1_27590) 33295..33852 - 558 WP_211754329.1 thioredoxin fold domain-containing protein -
KGB1_RS27600 (KGB1_27595) 34047..36275 - 2229 WP_211754320.1 Toxin RTX-I translocation ATP-binding protein VF
KGB1_RS27605 (KGB1_27600) 36275..37528 - 1254 WP_117282671.1 HlyD family efflux transporter periplasmic adaptor subunit -
KGB1_RS27610 (KGB1_27605) 38156..38680 - 525 WP_211754321.1 hypothetical protein -
KGB1_RS27615 (KGB1_27610) 38907..39023 + 117 Protein_41 IS3 family transposase ISYpe1 Transposase
KGB1_RS27620 (KGB1_27615) 39249..39617 - 369 Protein_42 IS110 family transposase -
KGB1_RS27625 40922..41227 + 306 WP_224337140.1 CPBP family intramembrane metalloprotease -
KGB1_RS27630 (KGB1_27625) 41807..41808 - 2 WP_224337134.1 IS1 family transposase ISEic1 Transposase
KGB1_RS27635 (KGB1_27630) 42140..42463 - 324 WP_072207003.1 TonB family protein -
KGB1_RS27640 (KGB1_27635) 42596..42961 - 366 WP_193168569.1 DUF596 domain-containing protein -
KGB1_RS27645 (KGB1_27640) 42972..44399 - 1428 WP_253616153.1 DUF637 domain-containing protein -
KGB1_RS27650 (KGB1_27645) 44688..44993 - 306 WP_049011000.1 DUF596 domain-containing protein -
KGB1_RS27655 45073..45408 - 336 WP_253616156.1 hypothetical protein -
KGB1_RS27660 45359..46390 - 1032 WP_253616192.1 DUF637 domain-containing protein -
KGB1_RS27665 (KGB1_27650) 46330..49878 - 3549 WP_253616194.1 16S rRNA endonuclease CdiA VF
KGB1_RS27670 49978..50286 - 309 Protein_52 16S rRNA endonuclease CdiA VF
KGB1_RS27675 (KGB1_27655) 50468..52144 - 1677 WP_040107960.1 Hemolysin transporter protein ShlB VF
KGB1_RS27680 (KGB1_27660) 53158..54015 - 858 WP_047665800.1 incFII family plasmid replication initiator RepA -
KGB1_RS27685 54034..54203 - 170 Protein_55 protein CopA/IncA -
KGB1_RS27690 (KGB1_27670) 54311..54571 - 261 WP_047665801.1 replication regulatory protein RepA -
KGB1_RS27695 (KGB1_27675) 54721..55257 - 537 WP_211754323.1 Phospholipase D VF
KGB1_RS27700 (KGB1_27680) 55261..56049 - 789 WP_211754324.1 thioredoxin domain-containing protein -
KGB1_RS27705 (KGB1_27685) 56170..56754 - 585 WP_110244284.1 fertility inhibition protein FinO -
KGB1_RS27710 (KGB1_27690) 56854..57576 - 723 WP_049155553.1 type-F conjugative transfer system pilin acetylase TraX -
KGB1_RS27715 (KGB1_27695) 57656..62917 - 5262 WP_253616159.1 Multifunctional conjugation protein TraI Relaxase
KGB1_RS27720 (KGB1_27700) 62917..65220 - 2304 WP_253616162.1 type IV conjugative transfer system coupling protein TraD -
KGB1_RS27725 (KGB1_27705) 65349..66038 - 690 WP_253616165.1 hypothetical protein -
KGB1_RS27730 (KGB1_27710) 66231..66962 - 732 WP_004152629.1 conjugal transfer complement resistance protein TraT -
KGB1_RS27735 (KGB1_27715) 67152..67679 - 528 WP_253616196.1 conjugal transfer protein TraS -
KGB1_RS27740 (KGB1_27720) 67685..70534 - 2850 WP_253616167.1 conjugal transfer mating-pair stabilization protein TraG -
KGB1_RS27745 (KGB1_27725) 70534..71913 - 1380 WP_253616170.1 conjugal transfer pilus assembly protein TraH -
KGB1_RS27750 (KGB1_27730) 71891..72334 - 444 WP_023158001.1 F-type conjugal transfer protein TrbF -
KGB1_RS27755 (KGB1_27735) 72380..72937 - 558 WP_253616172.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KGB1_RS27760 (KGB1_27740) 72909..73148 - 240 WP_023316407.1 type-F conjugative transfer system pilin chaperone TraQ -
KGB1_RS27765 (KGB1_27745) 73159..73911 - 753 WP_253616175.1 type-F conjugative transfer system pilin assembly protein TraF -
KGB1_RS27770 (KGB1_27750) 73932..74258 - 327 WP_064144773.1 hypothetical protein -
KGB1_RS27775 (KGB1_27755) 74269..74496 - 228 WP_110244276.1 conjugal transfer protein TrbE -
KGB1_RS27780 (KGB1_27760) 74528..76483 - 1956 WP_253616177.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KGB1_RS27785 (KGB1_27765) 76542..77189 - 648 WP_253616180.1 type-F conjugative transfer system pilin assembly protein TrbC -
KGB1_RS27790 (KGB1_27770) 77381..77620 + 240 WP_253616182.1 hypothetical protein -
KGB1_RS27795 (KGB1_27775) 77617..77796 - 180 WP_253616185.1 hypothetical protein -
KGB1_RS27800 (KGB1_27780) 77817..78776 - 960 WP_168712236.1 conjugal transfer pilus assembly protein TraU -
KGB1_RS27805 (KGB1_27785) 78820..79446 - 627 WP_253616187.1 type-F conjugative transfer system protein TraW -
KGB1_RS27810 (KGB1_27790) 79446..79835 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
KGB1_RS27815 (KGB1_27795) 79835..82474 - 2640 WP_253616190.1 type IV secretion system protein TraC -
KGB1_RS27820 (KGB1_27800) 82546..82944 - 399 WP_072158599.1 hypothetical protein -
KGB1_RS27825 (KGB1_27805) 82952..83266 - 315 WP_253616121.1 hypothetical protein -
KGB1_RS27830 (KGB1_27810) 83371..83661 - 291 WP_253616123.1 hypothetical protein -
KGB1_RS27835 (KGB1_27815) 83658..84062 - 405 WP_253616126.1 hypothetical protein -
KGB1_RS27840 (KGB1_27820) 84129..84446 - 318 WP_253616128.1 hypothetical protein -
KGB1_RS27845 (KGB1_27825) 84447..84665 - 219 WP_004171484.1 hypothetical protein -
KGB1_RS27850 (KGB1_27830) 84689..84979 - 291 WP_253616131.1 hypothetical protein -
KGB1_RS27855 85008..85406 - 399 WP_223170083.1 hypothetical protein -
KGB1_RS27860 (KGB1_27840) 85562..86131 - 570 WP_046622829.1 type IV conjugative transfer system lipoprotein TraV -
KGB1_RS27865 (KGB1_27845) 86151..86306 - 156 WP_153587559.1 hypothetical protein -
KGB1_RS27870 (KGB1_27850) 86344..86757 - 414 Protein_92 conjugal transfer protein TraP -
KGB1_RS27875 (KGB1_27855) 86750..88174 - 1425 WP_253616134.1 F-type conjugal transfer pilus assembly protein TraB -
KGB1_RS27880 (KGB1_27860) 88174..88914 - 741 WP_049155519.1 type-F conjugative transfer system secretin TraK -
KGB1_RS27885 (KGB1_27865) 88901..89467 - 567 WP_020316627.1 type IV conjugative transfer system protein TraE -
KGB1_RS27890 (KGB1_27870) 89487..89792 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
KGB1_RS27895 (KGB1_27875) 89806..90174 - 369 WP_047665762.1 type IV conjugative transfer system pilin TraA -
KGB1_RS27900 (KGB1_27880) 90228..90599 - 372 WP_004208838.1 TraY domain-containing protein -
KGB1_RS27905 (KGB1_27885) 90683..91378 - 696 WP_225372886.1 transcriptional regulator TraJ family protein -
KGB1_RS27910 (KGB1_27890) 91585..91977 - 393 WP_253616136.1 conjugal transfer relaxosome DNA-binding protein TraM -
KGB1_RS27915 (KGB1_27895) 92484..92891 + 408 WP_253616198.1 hypothetical protein VF
KGB1_RS27920 (KGB1_27900) 92928..93458 - 531 WP_087846439.1 antirestriction protein -
KGB1_RS27925 (KGB1_27905) 94083..94916 - 834 WP_253616138.1 N-6 DNA methylase -
KGB1_RS27930 (KGB1_27910) 94962..95192 - 231 WP_047722596.1 hypothetical protein -
KGB1_RS27935 (KGB1_27915) 95279..95626 - 348 WP_114501446.1 hypothetical protein -
KGB1_RS27940 (KGB1_27920) 95692..96072 - 381 WP_240289755.1 hypothetical protein -
KGB1_RS27945 (KGB1_27925) 96900..97316 - 417 WP_049010942.1 helix-turn-helix domain-containing protein Antitoxin Detail
KGB1_RS27950 (KGB1_27930) 97313..97624 - 312 WP_023292165.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
KGB1_RS27955 (KGB1_27935) 97731..97955 - 225 WP_240289756.1 hypothetical protein -
KGB1_RS27960 (KGB1_27940) 97966..98178 - 213 WP_049157092.1 hypothetical protein -
KGB1_RS27965 (KGB1_27945) 98239..98595 - 357 WP_211754325.1 hypothetical protein -
KGB1_RS27970 (KGB1_27950) 99425..99958 - 534 Protein_112 IS110 family transposase ISAs16 Transposase
KGB1_RS27975 (KGB1_27955) 100169..100684 + 516 WP_049156577.1 putative RNA polymerase sigma factor FecI VF
KGB1_RS27980 (KGB1_27960) 100674..101654 + 981 WP_117110158.1 FecR family protein -
KGB1_RS27985 (KGB1_27965) 101813..104236 + 2424 WP_211754289.1 TonB-dependent siderophore receptor -
KGB1_RS27990 (KGB1_27970) 104251..105459 + 1209 WP_211754290.1 MFS transporter -
KGB1_RS27995 (KGB1_27975) 105475..105912 + 438 WP_211754291.1 hypothetical protein -
KGB1_RS28000 (KGB1_27980) 105982..106675 + 694 Protein_118 IS6 family transposase -
KGB1_RS28005 (KGB1_27985) 106854..107162 - 309 Protein_119 theronine dehydrogenase -
KGB1_RS28010 (KGB1_27990) 107159..107719 - 561 WP_211754292.1 plasmid SOS inhibition protein A -
KGB1_RS28015 (KGB1_27995) 107716..108151 - 436 Protein_121 conjugation system SOS inhibitor PsiB -
KGB1_RS28020 (KGB1_28000) 108192..108710 - 519 Protein_122 hypothetical protein -
KGB1_RS28025 108711..109057 + 347 Protein_123 cytoplasmic protein -
KGB1_RS28030 (KGB1_28005) 109302..109418 - 117 WP_223176086.1 type I toxin-antitoxin system Hok family toxin -
KGB1_RS28035 109366..109518 - 153 WP_224222653.1 DUF5431 family protein -
KGB1_RS28040 (KGB1_28010) 109800..110285 - 486 WP_049157791.1 GNAT family N-acetyltransferase Toxin Detail
KGB1_RS28045 (KGB1_28015) 110273..110560 - 288 WP_211754330.1 DUF1778 domain-containing protein Antitoxin Detail
KGB1_RS28050 (KGB1_28020) 110965..113160 - 2196 WP_000093087.1 DEAD/DEAH box helicase -
KGB1_RS28055 (KGB1_28025) 113157..114473 - 1317 WP_211754293.1 ATP-binding protein -
KGB1_RS28060 (KGB1_28030) 114477..116786 - 2310 WP_211754294.1 TerB N-terminal domain-containing protein -
KGB1_RS28065 (KGB1_28035) 117272..118171 - 900 WP_211754295.1 HTH-type transcriptional regulator PgrR VF
KGB1_RS28070 (KGB1_28040) 118310..119230 + 921 WP_049157780.1 alpha/beta hydrolase -
KGB1_RS28075 (KGB1_28045) 119230..120162 + 933 WP_049157778.1 alpha/beta hydrolase -
KGB1_RS28080 (KGB1_28050) 120181..120819 + 639 WP_049157803.1 SDR family oxidoreductase -
KGB1_RS28085 120946..121053 - 108 Protein_135 DNA mismatch repair protein MutT -
KGB1_RS28090 (KGB1_28055) 121277..122638 + 1362 WP_211754296.1 hypothetical protein -
KGB1_RS28095 122888..123018 + 131 Protein_137 integrase -
KGB1_RS28100 (KGB1_28060) 123250..123804 + 555 WP_080895899.1 sigma-70 family RNA polymerase sigma factor -
KGB1_RS28105 (KGB1_28065) 123812..124789 + 978 WP_110200253.1 FecR domain-containing protein -
KGB1_RS28110 (KGB1_28070) 124889..127384 + 2496 WP_253616141.1 Fe(3+)-pyochelin receptor VF
KGB1_RS28115 (KGB1_28075) 127448..129112 + 1665 WP_049157772.1 SbmA/BacA-like family transporter -
KGB1_RS28120 (KGB1_28080) 129275..129706 + 432 WP_080895896.1 TOBE domain-containing protein -
KGB1_RS28125 (KGB1_28085) 129754..130044 - 291 WP_110209805.1 DUF2623 family protein -
KGB1_RS28130 (KGB1_28090) 130227..130730 - 504 WP_049157769.1 DUF1543 domain-containing protein -
KGB1_RS28135 (KGB1_28095) 130839..131144 + 306 WP_139786181.1 hypothetical protein -
KGB1_RS28140 (KGB1_28100) 131407..132024 + 618 WP_023340962.1 LysE family transporter -
KGB1_RS28145 (KGB1_28105) 132321..134084 + 1764 WP_086070779.1 putative signaling protein VF
KGB1_RS28150 (KGB1_28110) 134365..134904 - 540 WP_046878778.1 VOC family protein -
KGB1_RS28155 (KGB1_28115) 135113..135502 - 390 WP_086070778.1 GFA family protein -
KGB1_RS28160 (KGB1_28120) 135699..136367 + 669 WP_086070777.1 epoxyqueuosine reductase QueH -
KGB1_RS28165 (KGB1_28125) 136662..136898 - 237 WP_071599419.1 hypothetical protein -
KGB1_RS28170 (KGB1_28130) 136898..137158 - 261 WP_012968162.1 hypothetical protein -
KGB1_RS28175 (KGB1_28135) 137462..137983 + 522 WP_049157765.1 putative RNA polymerase sigma factor FecI VF
KGB1_RS28180 (KGB1_28140) 137980..138933 + 954 WP_211754298.1 ferric citrate uptake sigma factor regulator FecR -
KGB1_RS28185 (KGB1_28145) 139020..141344 + 2325 WP_110409151.1 TonB-dependent Fe(3+) dicitrate receptor FecA -
KGB1_RS28190 (KGB1_28150) 141403..142305 + 903 WP_110209801.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
KGB1_RS28195 (KGB1_28155) 142302..143300 + 999 WP_211754299.1 Fe(3+) dicitrate transport system permease protein FecC VF
KGB1_RS28200 (KGB1_28160) 143297..144253 + 957 WP_049157757.1 Fe(3+) dicitrate transport system permease protein FecD VF
KGB1_RS28205 (KGB1_28165) 144254..145021 + 768 WP_110209800.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
KGB1_RS28210 (KGB1_28170) 145331..145960 - 630 Protein_160 IS5 family transposase IS903B Transposase
KGB1_RS28215 (KGB1_28175) 145946..146160 - 215 Protein_161 IS3 family transposase ISKpn8 Transposase
KGB1_RS28220 (KGB1_28180) 146349..146654 - 306 WP_253616143.1 theronine dehydrogenase -
KGB1_RS28225 (KGB1_28185) 146651..147379 - 729 WP_211754301.1 plasmid SOS inhibition protein A -
KGB1_RS28230 (KGB1_28190) 147391..147807 - 417 WP_211754302.1 conjugation system SOS inhibitor PsiB -
KGB1_RS28235 (KGB1_28195) 147852..149852 - 2001 WP_211754303.1 ParB/RepB/Spo0J family partition protein -
KGB1_RS28240 (KGB1_28200) 149920..150153 - 234 WP_047722626.1 DUF905 domain-containing protein -
KGB1_RS28245 (KGB1_28205) 150201..150743 - 543 WP_047722628.1 single-stranded DNA-binding protein -
KGB1_RS28250 150774..150977 - 204 WP_227521635.1 single-stranded DNA-binding protein -
KGB1_RS28255 (KGB1_28210) 151403..151741 - 339 WP_211754304.1 hypothetical protein -
KGB1_RS28260 (KGB1_28215) 151776..152030 - 255 Protein_170 DNA polymerase III subunit theta -
KGB1_RS28265 (KGB1_28220) 152218..152409 - 192 WP_049156112.1 hypothetical protein -
KGB1_RS28270 (KGB1_28225) 152452..152958 - 507 WP_211754305.1 antirestriction protein ArdA -
KGB1_RS28275 (KGB1_28230) 153003..153431 - 429 WP_080895884.1 antirestriction protein -
KGB1_RS28280 (KGB1_28235) 153956..154186 - 231 WP_080895901.1 hypothetical protein -
KGB1_RS28285 (KGB1_28240) 154400..154825 + 426 WP_001776124.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KGB1_RS28290 (KGB1_28245) 154825..156096 + 1272 WP_110204325.1 Y-family DNA polymerase -
KGB1_RS28295 (KGB1_28250) 156175..156427 + 253 Protein_177 type II toxin-antitoxin system Phd/YefM family antitoxin -
KGB1_RS28300 (KGB1_28255) 156539..156784 + 246 WP_228298558.1 hypothetical protein -
KGB1_RS28305 (KGB1_28260) 157686..158657 - 972 WP_072124326.1 ParB/RepB/Spo0J family plasmid partition protein -
KGB1_RS28310 (KGB1_28265) 158657..159823 - 1167 WP_000523812.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance