MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP071711 Location: 2368238..2377589 Organism: Escherichia coli strain EC20017429 Replicon: chromosome
Accession: NZ_CP071711 Location: 2368238..2377589 Organism: Escherichia coli strain EC20017429 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQM62_RS11875 (2363867) | 2363867..2364352 | + | 486 | WP_000849570.1 | antirestriction protein | - |
| JQM62_RS11880 (2364368) | 2364368..2364844 | + | 477 | WP_001186727.1 | RadC family protein | - |
| JQM62_RS11885 (2364907) | 2364907..2365128 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JQM62_RS11890 (2365291) | 2365291..2365659 | + | 369 | WP_001339471.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| JQM62_RS11895 (2365749) | 2365749..2366126 | + | 378 | WP_000854748.1 | TA system toxin CbtA family protein | - |
| JQM62_RS11900 (2366123) | 2366123..2366611 | + | 489 | WP_000761721.1 | DUF5983 family protein | - |
| JQM62_RS11905 (2366623) | 2366623..2366820 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| JQM62_RS11910 (2366917) | 2366917..2367489 | + | 573 | WP_001290246.1 | DUF4942 domain-containing protein | - |
| JQM62_RS11915 (2368238) | 2368238..2369776 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JQM62_RS11920 (2370142) | 2370142..2371476 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JQM62_RS11925 (2371556) | 2371556..2373703 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JQM62_RS11930 (2373762) | 2373762..2375219 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JQM62_RS11935 (2375456) | 2375456..2376973 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JQM62_RS11940 (2377092) | 2377092..2377265 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JQM62_RS11945 (2377293) | 2377293..2377589 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JQM62_RS11950 (2377816) | 2377816..2378088 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| JQM62_RS11955 (2378100) | 2378100..2378330 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JQM62_RS11960 (2378511) | 2378511..2380142 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| JQM62_RS11965 (2380139) | 2380139..2380858 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |