MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 168189 bp
Accession: NZ_CP071697 Location: 1083566..1251754 Organism: Streptococcus suis strain 1112S Replicon: chromosome
Accession: NZ_CP071697 Location: 1083566..1251754 Organism: Streptococcus suis strain 1112S Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1N58_RS05205 () | 1079778..1081838 | + | 2061 | WP_207560591.1 | 5'-nucleotidase C-terminal domain-containing protein | - |
| J1N58_RS05210 () | 1081890..1082537 | + | 648 | WP_015646813.1 | Maf family protein | - |
| J1N58_RS05215 () | 1082589..1083077 | + | 489 | WP_002936504.1 | YkgJ family cysteine cluster protein | - |
| J1N58_RS05220 () | 1083588..1084751 | + | 1164 | WP_172081631.1 | IS30 family transposase ISSeq6 | Transposase |
| J1N58_RS05225 () | 1085018..1085308 | - | 291 | WP_105096831.1 | plasmid mobilization relaxosome protein MobC | - |
| J1N58_RS05230 () | 1085466..1086587 | + | 1122 | WP_015445098.1 | IS110 family transposase ISCARN28 | Transposase |
| J1N58_RS05235 () | 1087229..1091986 | + | 4758 | WP_207560592.1 | C5a peptidase | VF |
| J1N58_RS05240 () | 1092219..1093070 | - | 852 | WP_099807308.1 | NAD(P)H-hydrate dehydratase | - |
| J1N58_RS05245 () | 1093168..1093791 | + | 624 | WP_024379924.1 | endonuclease III | - |
| J1N58_RS05250 () | 1094077..1095060 | + | 984 | WP_207560593.1 | GMP reductase | - |
| J1N58_RS05255 () | 1095130..1096479 | + | 1350 | WP_207560594.1 | MATE family efflux transporter | - |
| J1N58_RS05260 () | 1096578..1097096 | + | 519 | WP_099872524.1 | ribosome maturation factor RimM | - |
| J1N58_RS05265 () | 1097086..1097811 | + | 726 | WP_002941457.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| J1N58_RS05270 () | 1097842..1098909 | + | 1068 | WP_029176434.1 | histidinol-phosphate aminotransferase family protein | - |
| J1N58_RS05275 () | 1099023..1099772 | + | 750 | WP_024378672.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| J1N58_RS05280 () | 1099769..1100680 | + | 912 | WP_029176977.1 | 1-phosphofructokinase | - |
| J1N58_RS05285 () | 1100677..1102632 | + | 1956 | WP_029185018.1 | fructose-specific PTS transporter subunit EIIC | - |
| J1N58_RS05290 () | 1102824..1109546 | + | 6723 | WP_207560595.1 | YSIRK-type signal peptide-containing protein | - |
| J1N58_RS05295 () | 1109678..1110052 | + | 375 | WP_024378668.1 | DUF1149 family protein | - |
| J1N58_RS05300 () | 1110054..1110905 | + | 852 | WP_024378667.1 | DegV family protein | - |
| J1N58_RS05305 () | 1110914..1111681 | + | 768 | WP_015646867.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| J1N58_RS05310 () | 1111678..1112889 | + | 1212 | WP_099871370.1 | CCA tRNA nucleotidyltransferase | - |
| J1N58_RS05315 () | 1112882..1114750 | + | 1869 | WP_207560596.1 | ATP-binding cassette domain-containing protein | - |
| J1N58_RS05320 () | 1114751..1115086 | + | 336 | WP_105096417.1 | hypothetical protein | - |
| J1N58_RS05325 () | 1115178..1116137 | + | 960 | WP_099871363.1 | ROK family glucokinase | - |
| J1N58_RS05330 () | 1116257..1116535 | + | 279 | WP_099871361.1 | hypothetical protein | - |
| J1N58_RS05335 () | 1116548..1116850 | + | 303 | WP_099871358.1 | hypothetical protein | - |
| J1N58_RS05340 () | 1116903..1117742 | + | 840 | WP_099807031.1 | thymidylate synthase | - |
| J1N58_RS05345 () | 1117995..1118507 | + | 513 | WP_099807030.1 | dihydrofolate reductase | - |
| J1N58_RS05350 () | 1118705..1119931 | + | 1227 | WP_099807028.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| J1N58_RS05355 () | 1119992..1120579 | + | 588 | WP_099871356.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| J1N58_RS05360 () | 1120602..1121015 | + | 414 | WP_024413632.1 | nucleoside-diphosphate kinase | - |
| J1N58_RS05365 () | 1121111..1122943 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| J1N58_RS05370 () | 1122993..1123175 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| J1N58_RS05375 () | 1123310..1124632 | + | 1323 | WP_161944095.1 | excalibur calcium-binding domain-containing protein | - |
| J1N58_RS05380 () | 1124694..1124918 | + | 225 | WP_207560597.1 | hypothetical protein | - |
| J1N58_RS05385 () | 1125017..1125598 | + | 582 | WP_024418279.1 | thymidine kinase | - |
| J1N58_RS05390 () | 1125957..1127036 | + | 1080 | WP_002943195.1 | peptide chain release factor 1 | - |
| J1N58_RS05395 () | 1127036..1127869 | + | 834 | WP_024378652.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| J1N58_RS05400 () | 1127856..1128464 | + | 609 | WP_207560598.1 | threonylcarbamoyl-AMP synthase | - |
| J1N58_RS05405 () | 1128461..1128892 | + | 432 | WP_024408913.1 | GNAT family N-acetyltransferase | - |
| J1N58_RS05410 () | 1128916..1130175 | + | 1260 | WP_099871355.1 | serine hydroxymethyltransferase | - |
| J1N58_RS05415 () | 1130175..1131149 | + | 975 | WP_002943200.1 | nucleoid-associated protein | - |
| J1N58_RS05420 () | 1131150..1131749 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
| J1N58_RS05425 () | 1131850..1132608 | + | 759 | WP_002943202.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| J1N58_RS05430 () | 1132625..1133374 | + | 750 | WP_207560599.1 | translation initiation factor 1 (IF-1) | - |
| J1N58_RS05435 () | 1133396..1133749 | + | 354 | Protein_1024 | HIRAN domain-containing protein | - |
| J1N58_RS05440 () | 1133770..1134627 | - | 858 | WP_029752963.1 | hypothetical protein | - |
| J1N58_RS05445 () | 1134746..1135534 | - | 789 | WP_105096422.1 | hypothetical protein | - |
| J1N58_RS05450 () | 1135729..1137410 | + | 1682 | Protein_1027 | AAA family ATPase | - |
| J1N58_RS05455 () | 1137407..1138456 | + | 1050 | WP_002934997.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| J1N58_RS05460 () | 1138708..1140258 | - | 1551 | WP_099871344.1 | glutamine-hydrolyzing GMP synthase | - |
| J1N58_RS05465 () | 1140534..1141232 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| J1N58_RS05470 () | 1141336..1141668 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| J1N58_RS05475 () | 1141681..1143255 | + | 1575 | WP_014637933.1 | signal recognition particle protein | - |
| J1N58_RS05480 () | 1143449..1144117 | + | 669 | WP_029176722.1 | SatD family protein | - |
| J1N58_RS05485 () | 1144121..1144774 | + | 654 | Protein_1034 | DUF3307 domain-containing protein | - |
| J1N58_RS05490 () | 1144842..1145228 | + | 387 | Protein_1035 | adenylyl-sulfate kinase | - |
| J1N58_RS05495 () | 1145753..1147264 | + | 1512 | WP_099871341.1 | serine/threonine protein kinase | - |
| J1N58_RS05500 () | 1147307..1147885 | + | 579 | WP_099871339.1 | hypothetical protein | - |
| J1N58_RS05505 () | 1147921..1148298 | + | 378 | WP_099871337.1 | hypothetical protein | - |
| J1N58_RS05510 () | 1148913..1150148 | - | 1236 | WP_044775821.1 | Abi family protein | - |
| J1N58_RS05515 () | 1150557..1150910 | - | 354 | WP_099871334.1 | helix-turn-helix domain-containing protein | - |
| J1N58_RS05520 () | 1151078..1154380 | + | 3303 | WP_099871331.1 | SEC10/PgrA surface exclusion domain-containing protein | - |
| J1N58_RS05525 () | 1154406..1154771 | + | 366 | WP_044775819.1 | zinc ribbon domain-containing protein | - |
| J1N58_RS05530 () | 1154789..1155295 | + | 507 | WP_099871329.1 | zinc ribbon domain-containing protein | - |
| J1N58_RS05535 () | 1155352..1156038 | - | 687 | WP_099871326.1 | XRE family transcriptional regulator | - |
| J1N58_RS05540 () | 1156168..1157430 | + | 1263 | WP_099871323.1 | hypothetical protein ; Integrase | Integrase |
| J1N58_RS05545 () | 1157430..1159283 | + | 1854 | WP_099871320.1 | hypothetical protein | - |
| J1N58_RS05550 () | 1159280..1160941 | + | 1662 | WP_099871318.1 | hypothetical protein ; Integrase | Integrase |
| J1N58_RS05555 () | 1160934..1161635 | + | 702 | WP_099871316.1 | hypothetical protein | - |
| J1N58_RS05560 () | 1161646..1163499 | + | 1854 | WP_099871313.1 | zinc-ribbon domain-containing protein | - |
| J1N58_RS05565 () | 1163847..1164917 | + | 1071 | WP_099809149.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| J1N58_RS05570 () | 1164987..1166495 | - | 1509 | WP_207560600.1 | Phosphomannomutase/phosphoglucomutase | VF |
| J1N58_RS05575 () | 1166572..1167513 | - | 942 | WP_105096430.1 | sensor histidine kinase | - |
| J1N58_RS05580 () | 1167510..1168178 | - | 669 | WP_207560623.1 | Response regulator protein GraR | VF |
| J1N58_RS05585 () | 1168217..1168474 | - | 258 | WP_105182497.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J1N58_RS05590 () | 1168464..1168703 | - | 240 | WP_015646833.1 | hypothetical protein | Antitoxin Detail |
| J1N58_RS05595 () | 1168794..1170764 | - | 1971 | WP_105182496.1 | FtsX-like permease family protein | - |
| J1N58_RS05600 () | 1170765..1171517 | - | 753 | WP_024400583.1 | ABC transporter ATP-binding protein YxdL | VF |
| J1N58_RS05605 () | 1171534..1171917 | - | 384 | WP_024418298.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| J1N58_RS05610 () | 1171930..1172070 | - | 141 | WP_032499492.1 | hypothetical protein | - |
| J1N58_RS05615 () | 1172475..1173641 | - | 1167 | WP_032510490.1 | ATP-grasp domain-containing protein | - |
| J1N58_RS05620 () | 1173659..1174405 | - | 747 | WP_024376612.1 | esterase family protein | - |
| J1N58_RS05625 () | 1174434..1175258 | - | 825 | WP_099807250.1 | alpha/beta hydrolase | - |
| J1N58_RS05630 () | 1175441..1176775 | - | 1335 | WP_032510488.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| J1N58_RS05635 () | 1176971..1177720 | - | 750 | WP_032510487.1 | HAD family hydrolase | - |
| J1N58_RS05640 () | 1177903..1179105 | - | 1203 | WP_032510486.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| J1N58_RS05645 () | 1179128..1179355 | - | 228 | WP_207560601.1 | DUF3173 family protein | - |
| J1N58_RS05650 () | 1179635..1179859 | - | 225 | WP_044675867.1 | helix-turn-helix domain-containing protein | - |
| J1N58_RS05655 () | 1180340..1181461 | - | 1122 | WP_100881479.1 | IS110 family transposase ISSso6 | Transposase |
| J1N58_RS05660 () | 1181967..1182701 | - | 735 | WP_044980473.1 | ABC transporter permease | - |
| J1N58_RS05665 () | 1182698..1183453 | - | 756 | WP_044675522.1 | ABC transporter permease | - |
| J1N58_RS05670 () | 1183455..1184363 | - | 909 | WP_136647906.1 | Fluoroquinolones export ATP-binding protein | VF |
| J1N58_RS05675 () | 1184417..1184581 | - | 165 | WP_153598978.1 | hypothetical protein | - |
| J1N58_RS05680 () | 1184644..1184814 | - | 171 | WP_044980471.1 | type A2 lantipeptide | - |
| J1N58_RS05685 () | 1185017..1185715 | + | 699 | WP_044980470.1 | Transcriptional regulatory protein WalR | VF |
| J1N58_RS05690 () | 1185726..1187096 | + | 1371 | WP_136647907.1 | HAMP domain-containing histidine kinase | - |
| J1N58_RS05695 () | 1187188..1189053 | - | 1866 | WP_136647908.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J1N58_RS05700 () | 1189040..1189405 | - | 366 | WP_024380649.1 | MobC family plasmid mobilization relaxosome protein | - |
| J1N58_RS05705 () | 1189415..1189774 | - | 360 | WP_207560602.1 | hypothetical protein | - |
| J1N58_RS05710 () | 1190146..1190766 | - | 621 | WP_024418307.1 | TIR domain-containing protein | - |
| J1N58_RS05715 () | 1190766..1192175 | - | 1410 | WP_024418308.1 | SIR2 family protein | - |
| J1N58_RS05720 () | 1192205..1193365 | - | 1161 | WP_024418309.1 | toll/interleukin-1 receptor domain-containing protein | - |
| J1N58_RS05725 () | 1193384..1194169 | - | 786 | WP_207560603.1 | zeta toxin family protein | Toxin Detail |
| J1N58_RS05730 () | 1194169..1194645 | - | 477 | WP_024418311.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J1N58_RS05735 () | 1194715..1195005 | - | 291 | WP_029180369.1 | hypothetical protein | - |
| J1N58_RS05740 () | 1195055..1195444 | - | 390 | WP_002935071.1 | hypothetical protein | - |
| J1N58_RS05745 () | 1195441..1195668 | - | 228 | WP_002935073.1 | hypothetical protein | - |
| J1N58_RS05750 () | 1195722..1196798 | - | 1077 | WP_024378757.1 | toprim domain-containing protein | - |
| J1N58_RS05755 () | 1196838..1197476 | - | 639 | WP_024378756.1 | hypothetical protein | - |
| J1N58_RS05760 () | 1197609..1197877 | + | 269 | Protein_1089 | hypothetical protein | - |
| J1N58_RS05765 () | 1197945..1199843 | + | 1899 | WP_105096409.1 | hypothetical protein | - |
| J1N58_RS05770 () | 1199829..1201091 | - | 1263 | WP_029174798.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J1N58_RS05775 () | 1201182..1202069 | + | 888 | WP_029176741.1 | Tyrosine recombinase XerD | VF |
| J1N58_RS05780 () | 1202114..1202413 | - | 300 | WP_099871072.1 | hypothetical protein | - |
| J1N58_RS05785 () | 1202427..1202726 | - | 300 | WP_000194866.1 | hypothetical protein | - |
| J1N58_RS05790 () | 1202797..1203756 | - | 960 | Protein_1095 | hypothetical protein | - |
| J1N58_RS05795 () | 1203723..1205606 | - | 1884 | WP_043028856.1 | IS607 family transposase ISTsi1 | Transposase |
| J1N58_RS05800 () | 1205660..1205851 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| J1N58_RS05805 () | 1205922..1206152 | - | 231 | WP_002596258.1 | hypothetical protein | - |
| J1N58_RS05810 () | 1206198..1207052 | - | 855 | WP_002596257.1 | ParB/RepB/Spo0J family partition protein | - |
| J1N58_RS05815 () | 1207061..1208026 | - | 966 | WP_099871076.1 | plasmid recombination protein | - |
| J1N58_RS05820 () | 1208033..1208299 | - | 267 | WP_162495498.1 | hypothetical protein | - |
| J1N58_RS05825 () | 1208545..1209576 | - | 1032 | WP_081201666.1 | AAA family ATPase | - |
| J1N58_RS05830 () | 1209731..1210205 | - | 475 | Protein_1103 | sigma-70 family RNA polymerase sigma factor | - |
| J1N58_RS05835 () | 1210289..1210714 | - | 426 | WP_172007926.1 | sigma-70 family RNA polymerase sigma factor | - |
| J1N58_RS05840 () | 1210809..1211321 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| J1N58_RS05845 () | 1211809..1211982 | - | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
| J1N58_RS05850 () | 1212034..1213953 | - | 1920 | WP_207560604.1 | Tetracycline resistance protein TetO | VF |
| J1N58_RS05855 () | 1214320..1214487 | - | 168 | Protein_1108 | TnpV protein | - |
| J1N58_RS05860 () | 1214639..1215061 | + | 423 | WP_207560605.1 | GNAT family N-acetyltransferase | - |
| J1N58_RS05865 () | 1215058..1215738 | - | 681 | WP_010890648.1 | IS6 family transposase IS946V | Transposase |
| J1N58_RS05870 () | 1215959..1217926 | - | 1968 | WP_207560606.1 | putative ABC transporter ATP-binding protein YheS | ARG |
| J1N58_RS05875 () | 1218154..1218339 | - | 186 | Protein_1112 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| J1N58_RS05880 () | 1218485..1219222 | - | 738 | WP_207560607.1 | rRNA adenine N-6-methyltransferase | ARG |
| J1N58_RS05885 () | 1219347..1219430 | - | 84 | WP_013641314.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| J1N58_RS05890 () | 1219451..1219615 | - | 165 | WP_024410551.1 | peptide-binding protein | - |
| J1N58_RS05895 () | 1219704..1225628 | - | 5925 | WP_207560608.1 | N-6 DNA methylase | - |
| J1N58_RS05900 () | 1225677..1226228 | - | 552 | WP_105209015.1 | hypothetical protein | - |
| J1N58_RS05905 () | 1226212..1226403 | - | 192 | WP_024376811.1 | calcium-binding protein | - |
| J1N58_RS05910 () | 1226404..1231299 | - | 4896 | Protein_1119 | Agglutinin receptor | VF |
| J1N58_RS05915 () | 1231796..1233190 | - | 1395 | WP_002943376.1 | hypothetical protein | - |
| J1N58_RS05920 () | 1233197..1234039 | - | 843 | WP_002943377.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| J1N58_RS05925 () | 1234036..1234629 | - | 594 | WP_039692578.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| J1N58_RS05930 () | 1234751..1237552 | - | 2802 | WP_024377985.1 | CHAP domain-containing protein | - |
| J1N58_RS05935 () | 1237554..1238516 | - | 963 | WP_074392493.1 | type IV secretion system protein VirB4 | - |
| J1N58_RS05940 () | 1238521..1240194 | - | 1674 | Protein_1125 | group II intron reverse transcriptase/maturase | - |
| J1N58_RS05945 () | 1240723..1242210 | - | 1488 | WP_171943845.1 | type VI secretion protein | - |
| J1N58_RS05950 () | 1242167..1242520 | - | 354 | WP_171943846.1 | PrgI family protein | - |
| J1N58_RS05955 () | 1242576..1243430 | - | 855 | WP_207560180.1 | type IV secretion system protein | - |
| J1N58_RS05960 () | 1243449..1243691 | - | 243 | WP_001072171.1 | hypothetical protein | - |
| J1N58_RS05965 () | 1243709..1245526 | - | 1818 | WP_171943848.1 | type IV secretory system conjugative DNA transfer family protein | - |
| J1N58_RS05970 () | 1245526..1246014 | - | 489 | WP_002936460.1 | hypothetical protein | - |
| J1N58_RS05975 () | 1246091..1246675 | - | 585 | WP_100881397.1 | CPBP family intramembrane metalloprotease | - |
| J1N58_RS05980 () | 1246678..1246911 | - | 234 | WP_014621275.1 | hypothetical protein | - |
| J1N58_RS05985 () | 1246920..1247303 | - | 384 | WP_044684033.1 | arsenate reductase | - |
| J1N58_RS05990 () | 1247314..1247742 | - | 429 | WP_207560181.1 | hypothetical protein | - |
| J1N58_RS05995 () | 1247726..1249081 | - | 1356 | WP_207560182.1 | DNA (cytosine-5-)-methyltransferase | - |
| J1N58_RS06000 () | 1249230..1250048 | - | 819 | WP_207560183.1 | replication initiator protein A | - |
| J1N58_RS06005 () | 1250045..1250218 | - | 174 | WP_100881401.1 | hypothetical protein | - |
| J1N58_RS06010 () | 1250417..1250782 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| J1N58_RS06015 () | 1250848..1251342 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
| J1N58_RS06020 () | 1251675..1252838 | + | 1164 | WP_100881157.1 | IS30 family transposase | - |
| J1N58_RS06025 () | 1253478..1255571 | - | 2094 | WP_207560184.1 | type I DNA topoisomerase | - |
| J1N58_RS06030 () | 1255664..1256506 | - | 843 | WP_099779973.1 | DNA-processing protein DprA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|