MGE detailed information
MGE type: Prophage MGE length: 73284 bp
Accession: NZ_CP071491 Location: 1656799..1730082 Organism: Glaesserella parasuis strain GHP1807 Replicon: chromosome
Accession: NZ_CP071491 Location: 1656799..1730082 Organism: Glaesserella parasuis strain GHP1807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G54_RS08270 () | 1652231..1656043 | + | 3813 | WP_207342666.1 | YadA-like family protein | - |
| J1G54_RS08275 () | 1656120..1656500 | - | 381 | WP_010786782.1 | YacL family protein | - |
| J1G54_RS08280 () | 1656584..1656871 | - | 288 | Protein_1612 | excinuclease ABC subunit UvrA | - |
| J1G54_RS08285 () | 1656799..1657497 | - | 699 | WP_157888994.1 | hypothetical protein | - |
| J1G54_RS08290 () | 1658192..1658368 | + | 177 | WP_021113607.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J1G54_RS08295 () | 1658415..1658828 | + | 414 | WP_021113608.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J1G54_RS08300 () | 1658825..1659367 | - | 543 | Protein_1616 | phage minor tail protein L | - |
| J1G54_RS08305 () | 1659351..1662506 | - | 3156 | WP_203399198.1 | tape measure protein | - |
| J1G54_RS08310 () | 1662631..1663155 | - | 525 | WP_062924269.1 | Rha family transcriptional regulator | - |
| J1G54_RS08315 () | 1663290..1663550 | - | 261 | WP_021118484.1 | hypothetical protein | - |
| J1G54_RS08320 () | 1663604..1663930 | - | 327 | WP_021118483.1 | phage tail protein | - |
| J1G54_RS08325 () | 1663932..1664267 | - | 336 | WP_005714384.1 | hypothetical protein | - |
| J1G54_RS08330 () | 1664276..1664680 | - | 405 | WP_062924272.1 | hypothetical protein | - |
| J1G54_RS08335 () | 1664696..1665700 | - | 1005 | WP_062924273.1 | hypothetical protein | - |
| J1G54_RS08340 () | 1665703..1666104 | - | 402 | WP_062924274.1 | hypothetical protein | - |
| J1G54_RS08345 () | 1666104..1666517 | - | 414 | WP_021109525.1 | HK97 gp10 family phage protein | - |
| J1G54_RS08350 () | 1666519..1666890 | - | 372 | WP_021114924.1 | hypothetical protein | - |
| J1G54_RS08355 () | 1666893..1667354 | - | 462 | WP_207342667.1 | hypothetical protein | - |
| J1G54_RS08360 () | 1667329..1667679 | - | 351 | WP_078208733.1 | hypothetical protein | - |
| J1G54_RS08365 () | 1667733..1668683 | - | 951 | WP_021118474.1 | hypothetical protein | - |
| J1G54_RS08370 () | 1668712..1669446 | - | 735 | WP_207342668.1 | hypothetical protein | - |
| J1G54_RS08375 () | 1669811..1670230 | - | 420 | WP_021112316.1 | Bifunctional (p)ppGpp synthase/hydrolase RelA | VF |
| J1G54_RS08380 () | 1670230..1670448 | - | 219 | WP_021111144.1 | hypothetical protein | - |
| J1G54_RS08385 () | 1670448..1672100 | - | 1653 | WP_207342669.1 | minor capsid protein | - |
| J1G54_RS08390 () | 1672057..1673454 | - | 1398 | WP_062923831.1 | DUF4055 domain-containing protein | - |
| J1G54_RS08395 () | 1673464..1674699 | - | 1236 | WP_207342670.1 | PBSX family phage terminase large subunit | - |
| J1G54_RS08400 () | 1674683..1675198 | - | 516 | WP_207342671.1 | terminase small subunit | - |
| J1G54_RS08405 () | 1675367..1675582 | - | 216 | WP_075592542.1 | hypothetical protein | - |
| J1G54_RS08410 () | 1675545..1675889 | - | 345 | WP_021118467.1 | DUF2570 family protein | - |
| J1G54_RS08415 () | 1675862..1676407 | - | 546 | WP_021112377.1 | lysozyme | - |
| J1G54_RS08420 () | 1676382..1676681 | - | 300 | WP_198525547.1 | hypothetical protein | - |
| J1G54_RS08425 () | 1676795..1677358 | + | 564 | WP_021114960.1 | hypothetical protein | - |
| J1G54_RS08430 () | 1677511..1677756 | - | 246 | WP_026916569.1 | hypothetical protein | - |
| J1G54_RS08435 () | 1678233..1678820 | - | 588 | Protein_1643 | phage antirepressor N-terminal domain-containing protein | - |
| J1G54_RS08440 () | 1679371..1679556 | + | 186 | WP_021109610.1 | hypothetical protein | - |
| J1G54_RS08445 () | 1679565..1679942 | - | 378 | WP_207342672.1 | antitermination protein | - |
| J1G54_RS08450 () | 1679939..1680343 | - | 405 | WP_160416363.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J1G54_RS08455 () | 1680340..1680630 | - | 291 | WP_005714426.1 | DUF1364 domain-containing protein | - |
| J1G54_RS08460 () | 1680735..1680902 | + | 168 | WP_200859958.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J1G54_RS08465 () | 1680941..1681348 | + | 408 | WP_005714429.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J1G54_RS08470 () | 1681387..1681809 | - | 423 | WP_203399332.1 | recombination protein NinB | - |
| J1G54_RS08475 () | 1682086..1682757 | - | 672 | WP_203399205.1 | holin | - |
| J1G54_RS08480 () | 1682757..1683542 | - | 786 | WP_203399206.1 | replication protein | - |
| J1G54_RS08485 () | 1683539..1684177 | - | 639 | WP_203399333.1 | phage regulatory protein/antirepressor Ant | - |
| J1G54_RS08490 () | 1684273..1684518 | - | 246 | WP_160405314.1 | hypothetical protein | - |
| J1G54_RS08495 () | 1684539..1684745 | - | 207 | WP_012621794.1 | helix-turn-helix transcriptional regulator | - |
| J1G54_RS08500 () | 1684881..1685534 | + | 654 | WP_005714960.1 | LexA family transcriptional regulator | - |
| J1G54_RS08505 () | 1685512..1686369 | + | 858 | WP_160405316.1 | serine/threonine protein kinase | - |
| J1G54_RS08510 () | 1686366..1687103 | + | 738 | WP_021118453.1 | protein phosphatase 2C domain-containing protein | - |
| J1G54_RS08515 () | 1687492..1687638 | - | 147 | WP_021112693.1 | hypothetical protein | - |
| J1G54_RS08520 () | 1687876..1688091 | + | 216 | WP_021110748.1 | hypothetical protein | - |
| J1G54_RS08525 () | 1688033..1688341 | - | 309 | WP_160405318.1 | hypothetical protein | - |
| J1G54_RS08530 () | 1688540..1689181 | + | 642 | WP_021118904.1 | DUF3560 domain-containing protein | - |
| J1G54_RS08535 () | 1689237..1689509 | + | 273 | WP_160405320.1 | hypothetical protein | - |
| J1G54_RS08540 () | 1689554..1690060 | + | 507 | WP_160405321.1 | hypothetical protein | - |
| J1G54_RS08545 () | 1690047..1690253 | + | 207 | WP_160405323.1 | hypothetical protein | - |
| J1G54_RS08550 () | 1690250..1691167 | + | 918 | WP_160405325.1 | recombinase RecT | - |
| J1G54_RS08555 () | 1691223..1691390 | + | 168 | WP_157834276.1 | hypothetical protein | - |
| J1G54_RS08560 () | 1691371..1691646 | - | 276 | WP_035525034.1 | hypothetical protein | - |
| J1G54_RS08565 () | 1691776..1691994 | - | 219 | WP_012621817.1 | hypothetical protein | - |
| J1G54_RS08570 () | 1692616..1692960 | + | 345 | Protein_1670 | Bro-N domain-containing protein | - |
| J1G54_RS08575 () | 1693309..1693968 | + | 660 | WP_160405336.1 | translocation protein TolB precursor | - |
| J1G54_RS08580 () | 1693968..1694426 | + | 459 | WP_160405327.1 | single-stranded DNA-binding protein | - |
| J1G54_RS08585 () | 1694475..1694777 | + | 303 | WP_160405329.1 | hypothetical protein | - |
| J1G54_RS08590 () | 1694786..1695274 | + | 489 | WP_207342673.1 | hypothetical protein | - |
| J1G54_RS08595 () | 1695311..1696519 | - | 1209 | WP_016527735.1 | IS256 family transposase IS1414 | Transposase |
| J1G54_RS08600 () | 1696630..1696818 | - | 189 | WP_160405130.1 | ribbon-helix-helix protein, CopG family | - |
| J1G54_RS08605 () | 1697162..1697590 | + | 429 | WP_160405132.1 | hypothetical protein | - |
| J1G54_RS08610 () | 1697627..1698409 | + | 783 | WP_160405134.1 | riboflavin synthase subunit alpha | - |
| J1G54_RS08615 () | 1698411..1699070 | + | 660 | WP_160405136.1 | N-6 DNA methylase | - |
| J1G54_RS08620 () | 1699024..1699287 | + | 264 | WP_160405138.1 | hypothetical protein | - |
| J1G54_RS08625 () | 1699284..1699556 | + | 273 | WP_035524071.1 | hypothetical protein | - |
| J1G54_RS08630 () | 1699586..1699831 | + | 246 | WP_021118920.1 | DUF551 domain-containing protein | - |
| J1G54_RS08635 () | 1699925..1700071 | + | 147 | WP_160405139.1 | hypothetical protein | - |
| J1G54_RS08640 () | 1700094..1700399 | + | 306 | WP_078208700.1 | helix-turn-helix domain-containing protein | - |
| J1G54_RS08645 () | 1700303..1701358 | + | 1056 | WP_207342674.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J1G54_RS08660 () | 1701761..1702615 | + | 855 | WP_005712159.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| J1G54_RS08665 () | 1702743..1704164 | + | 1422 | WP_005712157.1 | membrane-bound lytic murein transglycosylase MltF | - |
| J1G54_RS08670 () | 1704189..1704329 | + | 141 | WP_005712155.1 | hypothetical protein | - |
| J1G54_RS08675 () | 1704443..1704661 | - | 219 | WP_005712153.1 | YgjV family protein | - |
| J1G54_RS08680 () | 1704855..1705790 | + | 936 | WP_005712151.1 | ABC transporter permease | - |
| J1G54_RS08685 () | 1705790..1706581 | + | 792 | WP_021111138.1 | Energy-coupling factor transporter ATP-binding protein EcfA1 | VF |
| J1G54_RS08690 () | 1706693..1707154 | - | 462 | WP_207342675.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| J1G54_RS08695 () | 1707247..1708446 | - | 1200 | WP_005712143.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| J1G54_RS08700 () | 1708535..1709179 | - | 645 | WP_160429751.1 | riboflavin synthase | - |
| J1G54_RS08705 () | 1709271..1710374 | - | 1104 | WP_021113973.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| J1G54_RS08710 () | 1710449..1710610 | + | 162 | WP_021112697.1 | hypothetical protein | - |
| J1G54_RS08715 () | 1710843..1712717 | - | 1875 | WP_203399211.1 | Peptidyl-prolyl cis-trans isomerase D | VF |
| J1G54_RS08720 () | 1712900..1714219 | + | 1320 | WP_021113971.1 | sodium:proton antiporter | - |
| J1G54_RS08725 () | 1714351..1714620 | + | 270 | WP_005597777.1 | 30S ribosomal protein S15 | - |
| J1G54_RS08730 () | 1714801..1716198 | - | 1398 | WP_021113969.1 | cytochrome-c peroxidase | - |
| J1G54_RS08735 () | 1716825..1717850 | + | 1026 | WP_021113968.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| J1G54_RS08740 () | 1718012..1719664 | + | 1653 | WP_203399212.1 | iron ABC transporter permease | - |
| J1G54_RS08745 () | 1719666..1720688 | + | 1023 | WP_005712117.1 | Fe(3+) ions import ATP-binding protein FbpC 2 | VF |
| J1G54_RS08750 () | 1720755..1721501 | - | 747 | WP_020997103.1 | hypothetical protein | - |
| J1G54_RS08755 () | 1721494..1721886 | - | 393 | WP_035492387.1 | heme lyase NrfEFG subunit NrfF | - |
| J1G54_RS08760 () | 1721883..1722419 | - | 537 | WP_021109844.1 | redoxin family protein | - |
| J1G54_RS08765 () | 1722416..1724317 | - | 1902 | WP_035520042.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| J1G54_RS08770 () | 1724435..1725961 | - | 1527 | WP_026916538.1 | Na+/H+ antiporter NhaC family protein | - |
| J1G54_RS08775 () | 1726471..1726875 | + | 405 | WP_005712108.1 | H-NS histone family protein | - |
| J1G54_RS08780 () | 1726970..1727806 | + | 837 | WP_005712106.1 | formyltetrahydrofolate deformylase | - |
| J1G54_RS08785 () | 1727812..1728279 | + | 468 | WP_021111127.1 | ribonuclease HI | - |
| J1G54_RS08790 () | 1728499..1730082 | + | 1584 | WP_021113962.1 | ABC transporter substrate-binding protein | - |
| J1G54_RS08795 () | 1730259..1731212 | + | 954 | WP_021111125.1 | ABC transporter permease | - |
| J1G54_RS08800 () | 1731212..1733167 | + | 1956 | WP_160436524.1 | dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein | - |
| J1G54_RS08805 () | 1733171..1733977 | + | 807 | WP_016527528.1 | ABC transporter ATP-binding protein | - |
| J1G54_RS08810 () | 1734114..1734281 | + | 168 | WP_078208690.1 | dihydrofolate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|