MGE detailed information
MGE type: Prophage MGE length: 95236 bp
Accession: NZ_CP071489 Location: 436386..531621 Organism: Glaesserella parasuis strain YHP1815 Replicon: chromosome
Accession: NZ_CP071489 Location: 436386..531621 Organism: Glaesserella parasuis strain YHP1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G50_RS02310 () | 431438..432244 | + | 807 | WP_021112950.1 | type I methionyl aminopeptidase | - |
| J1G50_RS02315 () | 432769..433029 | - | 261 | WP_035497322.1 | deoxyribose-phosphate aldolase | - |
| J1G50_RS02320 () | 433059..433523 | - | 465 | WP_078208431.1 | glycine zipper 2TM domain-containing protein | - |
| J1G50_RS02325 () | 433544..434161 | - | 618 | WP_021117448.1 | VOC family protein | - |
| J1G50_RS02330 () | 434198..435925 | + | 1728 | WP_160405476.1 | arginine--tRNA ligase | - |
| J1G50_RS02335 () | 436000..436969 | + | 970 | Protein_448 | IS3 family transposase | - |
| J1G50_RS02340 () | 437000..437649 | + | 650 | Protein_449 | IS5 family transposase | - |
| J1G50_RS02345 () | 437782..439959 | + | 2178 | WP_075593105.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| J1G50_RS02350 () | 439963..440442 | + | 480 | WP_005713131.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| J1G50_RS02355 () | 440630..441064 | + | 435 | WP_160405610.1 | transposase | - |
| J1G50_RS02360 () | 441096..441715 | + | 620 | Protein_453 | IS1595 family transposase IS1016C2 | Transposase |
| J1G50_RS02365 () | 441837..442250 | - | 414 | WP_021119054.1 | DUF2251 domain-containing protein | - |
| J1G50_RS02370 () | 442324..443619 | - | 1296 | WP_160405609.1 | DUF560 domain-containing protein | - |
| J1G50_RS02375 () | 443685..444287 | - | 603 | WP_062924264.1 | transferrin-binding protein-like solute binding protein | - |
| J1G50_RS02380 () | 444444..444785 | + | 342 | WP_021119057.1 | helix-turn-helix domain-containing protein | - |
| J1G50_RS02385 () | 444955..446391 | - | 1437 | WP_207356815.1 | sucrose-6-phosphate hydrolase | - |
| J1G50_RS02390 () | 446690..447115 | - | 426 | WP_021111730.1 | ribonuclease E inhibitor RraB | - |
| J1G50_RS02395 () | 447119..447670 | - | 552 | Protein_460 | YihA family ribosome biogenesis GTP-binding protein | - |
| J1G50_RS02400 () | 447672..447854 | + | 183 | Protein_461 | o-succinylbenzoate synthase | - |
| J1G50_RS02405 () | 448160..451753 | + | 3594 | WP_207356816.1 | hypothetical protein | VF |
| J1G50_RS02410 () | 451830..452210 | - | 381 | WP_010786782.1 | YacL family protein | - |
| J1G50_RS02415 () | 452294..452581 | - | 288 | Protein_464 | excinuclease ABC subunit UvrA | - |
| J1G50_RS02420 () | 452509..453033 | - | 525 | WP_021112309.1 | hypothetical protein | - |
| J1G50_RS02425 () | 453087..453599 | - | 513 | WP_160421845.1 | tail assembly protein | - |
| J1G50_RS02430 () | 453629..454390 | - | 762 | WP_160405333.1 | C40 family peptidase | - |
| J1G50_RS02435 () | 454476..454652 | + | 177 | WP_021113607.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J1G50_RS02440 () | 454699..455112 | + | 414 | WP_021113608.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J1G50_RS02445 () | 455109..455846 | - | 738 | WP_160405297.1 | phage minor tail protein L | - |
| J1G50_RS02450 () | 455856..459521 | - | 3666 | WP_160405299.1 | tape measure protein | - |
| J1G50_RS02455 () | 459736..461130 | - | 1395 | WP_207356817.1 | minor capsid protein | - |
| J1G50_RS02460 () | 461087..462484 | - | 1398 | WP_160421847.1 | DUF4055 domain-containing protein | - |
| J1G50_RS02465 () | 462494..463729 | - | 1236 | WP_160421848.1 | PBSX family phage terminase large subunit | - |
| J1G50_RS02470 () | 463713..464228 | - | 516 | WP_160421849.1 | terminase small subunit | - |
| J1G50_RS02475 () | 464615..464830 | - | 216 | WP_202116934.1 | hypothetical protein | - |
| J1G50_RS02480 () | 464793..465137 | - | 345 | WP_160421850.1 | DUF2570 family protein | - |
| J1G50_RS02485 () | 465110..465655 | - | 546 | WP_160405306.1 | lysozyme | - |
| J1G50_RS02490 () | 465630..465905 | - | 276 | WP_202116933.1 | hypothetical protein | - |
| J1G50_RS02495 () | 466009..466473 | + | 465 | WP_005714705.1 | hypothetical protein | - |
| J1G50_RS02500 () | 466466..466645 | - | 180 | WP_021109607.1 | hypothetical protein | - |
| J1G50_RS02505 () | 466837..467013 | - | 177 | WP_005714781.1 | hypothetical protein | - |
| J1G50_RS02510 () | 467310..467528 | + | 219 | WP_012621837.1 | hypothetical protein | - |
| J1G50_RS02515 () | 467537..467914 | - | 378 | WP_160405308.1 | antitermination protein | - |
| J1G50_RS02520 () | 467911..468315 | - | 405 | WP_160405310.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J1G50_RS02525 () | 468312..468602 | - | 291 | WP_021110734.1 | DUF1364 domain-containing protein | - |
| J1G50_RS02530 () | 468708..468875 | + | 168 | WP_200859958.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J1G50_RS02535 () | 468914..469321 | + | 408 | WP_021110735.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J1G50_RS02540 () | 469355..469783 | - | 429 | WP_164689675.1 | recombination protein NinB | - |
| J1G50_RS02545 () | 469819..470016 | - | 198 | WP_071610285.1 | hypothetical protein | - |
| J1G50_RS02550 () | 470039..470710 | - | 672 | WP_160405312.1 | holin | - |
| J1G50_RS02555 () | 470710..471495 | - | 786 | WP_075593099.1 | replication protein | - |
| J1G50_RS02560 () | 471492..472145 | - | 654 | WP_021118456.1 | phage regulatory protein/antirepressor Ant | - |
| J1G50_RS02565 () | 472236..472481 | - | 246 | WP_160405314.1 | hypothetical protein | - |
| J1G50_RS02570 () | 472502..472708 | - | 207 | WP_012621794.1 | helix-turn-helix transcriptional regulator | - |
| J1G50_RS02575 () | 472844..473497 | + | 654 | WP_005714960.1 | LexA family transcriptional regulator | - |
| J1G50_RS02580 () | 473475..474332 | + | 858 | WP_160405316.1 | serine/threonine protein kinase | - |
| J1G50_RS02585 () | 474329..475066 | + | 738 | WP_021118453.1 | protein phosphatase 2C domain-containing protein | - |
| J1G50_RS02590 () | 475455..475601 | - | 147 | WP_021112693.1 | hypothetical protein | - |
| J1G50_RS02595 () | 475839..476054 | + | 216 | WP_021110748.1 | hypothetical protein | - |
| J1G50_RS02600 () | 475996..476304 | - | 309 | WP_160405318.1 | hypothetical protein | - |
| J1G50_RS02605 () | 476503..477144 | + | 642 | WP_021118904.1 | DUF3560 domain-containing protein | - |
| J1G50_RS02610 () | 477200..477472 | + | 273 | WP_160405320.1 | hypothetical protein | - |
| J1G50_RS02615 () | 477517..478023 | + | 507 | WP_160405321.1 | hypothetical protein | - |
| J1G50_RS02620 () | 478010..478216 | + | 207 | WP_160405323.1 | hypothetical protein | - |
| J1G50_RS02625 () | 478213..479130 | + | 918 | WP_160405325.1 | recombinase RecT | - |
| J1G50_RS02630 () | 479186..479353 | + | 168 | WP_157834276.1 | hypothetical protein | - |
| J1G50_RS02635 () | 479334..479609 | - | 276 | WP_035525034.1 | hypothetical protein | - |
| J1G50_RS02640 () | 479739..479957 | - | 219 | WP_012621817.1 | hypothetical protein | - |
| J1G50_RS02645 () | 480579..480923 | + | 345 | Protein_510 | Bro-N domain-containing protein | - |
| J1G50_RS02650 () | 481272..481931 | + | 660 | WP_160405336.1 | translocation protein TolB precursor | - |
| J1G50_RS02655 () | 481931..482389 | + | 459 | WP_160405327.1 | single-stranded DNA-binding protein | - |
| J1G50_RS02660 () | 482438..482740 | + | 303 | WP_160405329.1 | hypothetical protein | - |
| J1G50_RS02665 () | 482749..483267 | + | 519 | WP_160405331.1 | hypothetical protein | - |
| J1G50_RS02670 () | 483293..484500 | + | 1208 | Protein_515 | IS256 family transposase IS1414 | Transposase |
| J1G50_RS02675 () | 484592..484780 | - | 189 | WP_160405130.1 | ribbon-helix-helix protein, CopG family | - |
| J1G50_RS02680 () | 485124..485552 | + | 429 | WP_160405132.1 | hypothetical protein | - |
| J1G50_RS02685 () | 485589..486371 | + | 783 | WP_160405134.1 | riboflavin synthase subunit alpha | - |
| J1G50_RS02690 () | 486373..487032 | + | 660 | WP_160405136.1 | N-6 DNA methylase | - |
| J1G50_RS02695 () | 486986..487249 | + | 264 | WP_160405138.1 | hypothetical protein | - |
| J1G50_RS02700 () | 487246..487518 | + | 273 | WP_035524071.1 | hypothetical protein | - |
| J1G50_RS02705 () | 487548..487793 | + | 246 | WP_021118920.1 | DUF551 domain-containing protein | - |
| J1G50_RS02710 () | 487887..488033 | + | 147 | WP_160405139.1 | hypothetical protein | - |
| J1G50_RS02715 () | 488056..488361 | + | 306 | WP_078208700.1 | helix-turn-helix domain-containing protein | - |
| J1G50_RS02720 () | 488265..489320 | + | 1056 | WP_160405141.1 | hypothetical protein ; Integrase | Integrase |
| J1G50_RS02735 () | 489723..490577 | + | 855 | WP_005712159.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| J1G50_RS02740 () | 490705..492126 | + | 1422 | WP_071610474.1 | membrane-bound lytic murein transglycosylase MltF | - |
| J1G50_RS02745 () | 492151..492291 | + | 141 | WP_005712155.1 | hypothetical protein | - |
| J1G50_RS02750 () | 492405..492623 | - | 219 | WP_005712153.1 | YgjV family protein | - |
| J1G50_RS02755 () | 492815..493750 | + | 936 | WP_062924290.1 | ABC transporter permease | - |
| J1G50_RS02760 () | 493750..494541 | + | 792 | WP_005712148.1 | hypothetical protein | VF |
| J1G50_RS02765 () | 494653..495114 | - | 462 | WP_042905789.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| J1G50_RS02770 () | 495207..496406 | - | 1200 | WP_005712143.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| J1G50_RS02775 () | 496495..497139 | - | 645 | WP_035524086.1 | riboflavin synthase | - |
| J1G50_RS02780 () | 497180..498292 | - | 1113 | WP_160405143.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| J1G50_RS02785 () | 498367..498528 | + | 162 | WP_021112697.1 | hypothetical protein | - |
| J1G50_RS02790 () | 498761..500635 | - | 1875 | WP_160405144.1 | hypothetical protein | VF |
| J1G50_RS02795 () | 500818..502137 | + | 1320 | WP_042905784.1 | sodium:proton antiporter | - |
| J1G50_RS02800 () | 502269..502538 | + | 270 | WP_005597777.1 | 30S ribosomal protein S15 | - |
| J1G50_RS02805 () | 502719..504116 | - | 1398 | WP_021113969.1 | cytochrome-c peroxidase | - |
| J1G50_RS02810 () | 504743..505768 | + | 1026 | WP_021113968.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| J1G50_RS02815 () | 505980..507632 | + | 1653 | WP_071610469.1 | iron ABC transporter permease | - |
| J1G50_RS02820 () | 507634..508656 | + | 1023 | WP_021113966.1 | hypothetical protein | VF |
| J1G50_RS02825 () | 508723..509469 | - | 747 | WP_207356818.1 | cytochrome C biogenesis protein | - |
| J1G50_RS02830 () | 509462..509854 | - | 393 | WP_075630622.1 | heme lyase NrfEFG subunit NrfF | - |
| J1G50_RS02835 () | 509851..510387 | - | 537 | WP_035495677.1 | redoxin family protein | - |
| J1G50_RS02840 () | 510384..512285 | - | 1902 | WP_160405148.1 | hypothetical protein | VF |
| J1G50_RS02845 () | 512403..513929 | - | 1527 | WP_160405150.1 | Na+/H+ antiporter NhaC family protein | - |
| J1G50_RS02850 () | 514441..514845 | + | 405 | WP_021109841.1 | H-NS histone family protein | - |
| J1G50_RS02855 () | 514940..515776 | + | 837 | WP_005712106.1 | formyltetrahydrofolate deformylase | - |
| J1G50_RS02860 () | 515857..516324 | + | 468 | WP_021111127.1 | ribonuclease HI | - |
| J1G50_RS02865 () | 516544..518127 | + | 1584 | WP_021113962.1 | ABC transporter substrate-binding protein | - |
| J1G50_RS02870 () | 518304..519257 | + | 954 | WP_021111125.1 | ABC transporter permease | - |
| J1G50_RS02875 () | 519257..521212 | + | 1956 | WP_035496187.1 | dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein | - |
| J1G50_RS02880 () | 521216..522022 | + | 807 | WP_016527528.1 | hypothetical protein | VF |
| J1G50_RS02885 () | 522159..522326 | + | 168 | WP_078208690.1 | dihydrofolate reductase | - |
| J1G50_RS02890 () | 522440..523409 | - | 970 | Protein_557 | IS256 family transposase ISEc39 | Transposase |
| J1G50_RS02895 () | 523646..524122 | - | 477 | WP_075593083.1 | transcription elongation factor GreA | - |
| J1G50_RS02900 () | 524242..525681 | + | 1440 | WP_035493296.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| J1G50_RS02905 () | 525788..526996 | + | 1209 | WP_082259179.1 | IS256 family transposase IS1414 | Transposase |
| J1G50_RS02910 () | 527195..529081 | - | 1887 | WP_160405533.1 | molecular chaperone HtpG | - |
| J1G50_RS02915 () | 529106..529309 | + | 204 | WP_005712400.1 | hypothetical protein | - |
| J1G50_RS02920 () | 529360..530787 | - | 1428 | WP_062924302.1 | aspartate ammonia-lyase | - |
| J1G50_RS02925 () | 530980..531621 | - | 642 | WP_021111112.1 | hypothetical protein | VF |
| J1G50_RS02930 () | 531697..532017 | - | 321 | WP_005712406.1 | alkylphosphonate utilization protein | - |
| J1G50_RS02935 () | 532142..533446 | - | 1305 | WP_075593082.1 | sodium ion-translocating decarboxylase subunit beta | - |
| J1G50_RS02940 () | 533455..535260 | - | 1806 | WP_071610349.1 | sodium-extruding oxaloacetate decarboxylase subunit alpha | - |
| J1G50_RS02945 () | 535273..535527 | - | 255 | WP_021111109.1 | oxaloacetate decarboxylase subunit gamma | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|