MGE detailed information
MGE type: Conjugative plasmid MGE length: 159570 bp
Accession: NZ_CP071442 Location: 1..159570 Organism: Escherichia coli strain EcPF20 Replicon: plasmid p1
Accession: NZ_CP071442 Location: 1..159570 Organism: Escherichia coli strain EcPF20 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1F34_RS23070 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| J1F34_RS23075 () | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| J1F34_RS23080 () | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| J1F34_RS23085 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| J1F34_RS23090 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| J1F34_RS23095 () | 5199..6152 | - | 954 | WP_000280980.1 | hypothetical protein | VF |
| J1F34_RS23100 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| J1F34_RS23105 () | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| J1F34_RS23110 () | 9128..9453 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| J1F34_RS23115 () | 10434..11621 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| J1F34_RS23120 () | 11618..13558 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| J1F34_RS23125 () | 13562..14932 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| J1F34_RS23130 () | 15406..15600 | + | 195 | Protein_12 | IS200-IS605 family transposase IS200C | Transposase |
| J1F34_RS23135 () | 15729..16670 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| J1F34_RS23140 () | 16905..18294 | - | 1390 | Protein_14 | ISNCY family transposase ISKpn21 | Transposase |
| J1F34_RS23145 () | 18604..18753 | - | 150 | Protein_15 | IS3 family transposase IS2 | Transposase |
| J1F34_RS23150 () | 18931..20124 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| J1F34_RS23160 () | 23203..23496 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| J1F34_RS23165 () | 23554..23753 | - | 200 | Protein_19 | lysis protein | - |
| J1F34_RS23170 () | 24307..25406 | + | 1100 | Protein_20 | IS481 family transposase ISKpn28 | Transposase |
| J1F34_RS23175 () | 26642..27757 | + | 1116 | WP_001318220.1 | hypothetical protein | VF |
| J1F34_RS23180 () | 27897..31556 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| J1F34_RS23185 () | 31660..32889 | + | 1230 | WP_000933672.1 | hypothetical protein | VF |
| J1F34_RS23190 () | 32974..33930 | + | 957 | WP_000271277.1 | hypothetical protein | VF |
| J1F34_RS23195 () | 33975..36152 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| J1F34_RS23200 () | 37007..38041 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| J1F34_RS23205 () | 38601..38909 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| J1F34_RS23210 () | 39008..39190 | - | 183 | WP_001514250.1 | hypothetical protein | Toxin Detail |
| J1F34_RS23215 () | 39187..39384 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| J1F34_RS23220 () | 40066..41340 | + | 1275 | WP_174412140.1 | HlyD family secretion protein | - |
| J1F34_RS23225 () | 41315..43429 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| J1F34_RS23230 () | 43599..43910 | - | 312 | WP_001259758.1 | colicin V | - |
| J1F34_RS23235 () | 43888..44124 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| J1F34_RS23240 () | 44285..45062 | + | 778 | Protein_34 | Gfo/Idh/MocA family oxidoreductase | - |
| J1F34_RS23245 () | 45064..45333 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| J1F34_RS23250 () | 45330..45596 | + | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| J1F34_RS23255 () | 45652..46104 | - | 453 | WP_000670963.1 | N-acetyltransferase | - |
| J1F34_RS23260 () | 46397..46657 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| J1F34_RS23265 () | 46654..47244 | + | 591 | WP_151340509.1 | hypothetical protein | - |
| J1F34_RS23270 () | 47264..47521 | - | 258 | WP_000142431.1 | hypothetical protein | - |
| J1F34_RS23275 () | 47650..47985 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| J1F34_RS23280 () | 48007..49887 | - | 1881 | WP_112039468.1 | colicin | - |
| J1F34_RS23285 () | 50073..50921 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| J1F34_RS23290 () | 50967..51248 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J1F34_RS23295 () | 51245..51514 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| J1F34_RS23300 () | 52158..53909 | - | 1752 | Protein_46 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| J1F34_RS23305 () | 53898..54305 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| J1F34_RS23310 () | 54443..55327 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| J1F34_RS23315 () | 55359..56558 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| J1F34_RS23320 () | 56664..57314 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| J1F34_RS23325 () | 57346..57588 | - | 243 | WP_000844627.1 | transposase | - |
| J1F34_RS23330 () | 57646..60612 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| J1F34_RS23335 () | 60616..61176 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| J1F34_RS23340 () | 61352..61702 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| J1F34_RS23345 () | 61905..62918 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| J1F34_RS23350 () | 63074..63547 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| J1F34_RS23355 () | 63699..64403 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F34_RS23360 () | 64467..64805 | + | 339 | Protein_58 | recombinase family protein | - |
| J1F34_RS23365 () | 64988..65848 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| J1F34_RS23370 () | 65995..66276 | + | 282 | Protein_60 | transposase zinc-binding domain-containing protein | - |
| J1F34_RS23375 () | 66446..67150 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F34_RS23380 () | 67211..68047 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| J1F34_RS23385 () | 68047..68850 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| J1F34_RS23390 () | 68911..69726 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| J1F34_RS23395 () | 69983..70885 | - | 903 | WP_001518958.1 | hypothetical protein | - |
| J1F34_RS23400 () | 70872..71591 | - | 720 | Protein_66 | AAA family ATPase | - |
| J1F34_RS23405 () | 71641..72345 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F34_RS23410 () | 72496..73311 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| J1F34_RS23415 () | 73501..74205 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F34_RS23420 () | 74270..75520 | - | 1251 | Protein_70 | transposase | - |
| J1F34_RS23425 () | 75595..76263 | - | 669 | WP_001300294.1 | hypothetical protein | VF |
| J1F34_RS23430 () | 76299..76535 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| J1F34_RS23435 () | 76532..76894 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| J1F34_RS23440 () | 76912..78606 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| J1F34_RS23445 () | 78658..79080 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| J1F34_RS23450 () | 79116..79391 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| J1F34_RS23455 () | 79405..79755 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| J1F34_RS23460 () | 79827..80261 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| J1F34_RS23465 () | 80605..81462 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| J1F34_RS23470 () | 81455..81529 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| J1F34_RS23475 () | 81754..82014 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| J1F34_RS23480 () | 82254..82844 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| J1F34_RS23485 () | 82883..83092 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| J1F34_RS23490 () | 83138..83599 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| J1F34_RS23495 () | 83844..84056 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| J1F34_RS23500 () | 84189..84749 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| J1F34_RS23505 () | 84852..85712 | - | 861 | WP_000704522.1 | hypothetical protein | VF |
| J1F34_RS23510 () | 85771..86517 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| J1F34_RS23515 () | 86537..91807 | - | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| J1F34_RS23520 () | 91807..93960 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| J1F34_RS23525 () | 94213..94944 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| J1F34_RS23530 () | 94958..95467 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| J1F34_RS23535 () | 95464..98289 | - | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| J1F34_RS23540 () | 98286..99659 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| J1F34_RS23545 () | 99659..100021 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| J1F34_RS23550 () | 99951..100496 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| J1F34_RS23555 () | 100483..100767 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| J1F34_RS23560 () | 100886..101233 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| J1F34_RS23565 () | 101249..101992 | - | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| J1F34_RS23570 () | 101985..102242 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| J1F34_RS23575 () | 102269..104077 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| J1F34_RS23580 () | 104074..104712 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J1F34_RS23585 () | 104721..105713 | - | 993 | WP_207268791.1 | conjugal transfer pilus assembly protein TraU | - |
| J1F34_RS23590 () | 105710..106342 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| J1F34_RS23595 () | 106339..106725 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| J1F34_RS23600 () | 106722..107432 | - | 711 | Protein_106 | hypothetical protein | - |
| J1F34_RS23605 () | 107462..109075 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| J1F34_RS23610 () | 109106..109456 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| J1F34_RS23615 () | 109453..109878 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| J1F34_RS23620 () | 109964..111889 | - | 1926 | Protein_110 | type IV secretion system protein TraC | - |
| J1F34_RS23625 () | 112049..112270 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| J1F34_RS23630 () | 112405..112920 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| J1F34_RS23635 () | 112917..113168 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| J1F34_RS23640 () | 113180..113410 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| J1F34_RS23645 () | 113364..113954 | - | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| J1F34_RS23650 () | 113944..115371 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| J1F34_RS23655 () | 115371..116075 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| J1F34_RS23660 () | 116086..116652 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| J1F34_RS23665 () | 116674..116985 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| J1F34_RS23670 () | 117000..117365 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| J1F34_RS23675 () | 117398..117793 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| J1F34_RS23680 () | 117892..118581 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| J1F34_RS23685 () | 118768..119151 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| J1F34_RS23690 () | 119485..120075 | + | 591 | Protein_124 | hypothetical protein | VF |
| J1F34_RS23695 () | 120371..121192 | - | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| J1F34_RS23700 () | 121311..121598 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| J1F34_RS23705 () | 121899..122196 | + | 298 | Protein_127 | hypothetical protein | - |
| J1F34_RS23710 () | 122497..122658 | - | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 122711..122922 | - | 212 | NuclAT_0 | - | - |
| - () | 122711..122922 | - | 212 | NuclAT_0 | - | - |
| - () | 122711..122922 | - | 212 | NuclAT_0 | - | - |
| - () | 122711..122922 | - | 212 | NuclAT_0 | - | - |
| J1F34_RS23715 () | 122934..123653 | - | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| J1F34_RS23720 () | 123650..124084 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| J1F34_RS23725 () | 124139..126097 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| J1F34_RS23730 () | 126161..126394 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| J1F34_RS23735 () | 126357..126989 | - | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| J1F34_RS23740 () | 127290..127709 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| J1F34_RS23745 () | 127795..128358 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| J1F34_RS23750 () | 128406..129767 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| J1F34_RS23755 () | 129819..130049 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| J1F34_RS23760 () | 130727..131055 | + | 329 | Protein_138 | pilus assembly protein | - |
| J1F34_RS23765 () | 131043..131201 | - | 159 | WP_207268792.1 | hypothetical protein | - |
| J1F34_RS23770 () | 131229..131975 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| J1F34_RS23775 () | 131990..133531 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| J1F34_RS23780 () | 133811..134272 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| J1F34_RS23785 () | 134272..134574 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| J1F34_RS23790 () | 135099..136070 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| J1F34_RS23795 () | 136331..136543 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| J1F34_RS23800 () | 136556..137131 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| J1F34_RS23805 () | 137200..137538 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| J1F34_RS23810 () | 138178..139149 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J1F34_RS23815 () | 139149..140315 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| J1F34_RS23820 () | 140615..141312 | - | 698 | Protein_150 | IS1 family transposase IS1S | Transposase |
| J1F34_RS23825 () | 141837..144038 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| J1F34_RS23830 () | 144120..145397 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| J1F34_RS23835 () | 145394..147136 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| J1F34_RS23840 () | 147136..148083 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| J1F34_RS23845 () | 148084..149808 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| J1F34_RS23850 () | 149944..151137 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| J1F34_RS23855 () | 151517..151897 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| J1F34_RS23860 () | 152238..152651 | - | 414 | Protein_158 | phosphopyruvate hydratase | - |
| J1F34_RS23865 () | 152649..152906 | + | 258 | Protein_159 | Tn3 family transposase | - |
| J1F34_RS23870 () | 153140..153997 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| J1F34_RS23875 () | 153994..154851 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| J1F34_RS23880 () | 154848..155675 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| J1F34_RS23885 () | 155675..156589 | - | 915 | WP_001514243.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| J1F34_RS23890 () | 156945..157642 | + | 698 | Protein_164 | IS1 family transposase IS1S | Transposase |
| J1F34_RS23895 () | 157822..158335 | - | 514 | Protein_165 | DUF4113 domain-containing protein | - |
| J1F34_RS23900 () | 158396..158500 | - | 105 | Protein_166 | AAA family ATPase | - |
| J1F34_RS23905 () | 158502..158825 | - | 324 | Protein_167 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|