MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98697 bp
Accession: NZ_CP071440 Location: 1..98697 Organism: Escherichia coli strain EcPNK004 Replicon: plasmid p1
Accession: NZ_CP071440 Location: 1..98697 Organism: Escherichia coli strain EcPNK004 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1F19_RS23670 () | 1301..2041 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| J1F19_RS23675 () | 2162..2344 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| J1F19_RS23680 () | 2687..3027 | - | 341 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| J1F19_RS23685 () | 3487..4656 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| J1F19_RS23690 () | 4689..4817 | + | 129 | Protein_5 | IS481 family transposase | - |
| J1F19_RS23695 () | 4852..5145 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| J1F19_RS23700 () | 5251..5526 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J1F19_RS23705 () | 5526..5810 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| J1F19_RS23710 () | 6415..7167 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| J1F19_RS23715 () | 7213..8178 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| J1F19_RS23720 () | 8211..8591 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| J1F19_RS23725 () | 8616..9506 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| J1F19_RS23730 () | 9907..10347 | + | 441 | Protein_13 | zinc-binding dehydrogenase | - |
| J1F19_RS23735 () | 10478..11356 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| J1F19_RS23740 () | 11346..12233 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| J1F19_RS23745 () | 12244..13068 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| J1F19_RS23750 () | 13074..14147 | + | 1074 | WP_000950177.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| J1F19_RS23755 () | 14140..15450 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| J1F19_RS23760 () | 15509..15817 | - | 309 | Protein_19 | IS4 family transposase ISEc13 | Transposase |
| J1F19_RS23765 () | 15894..16127 | - | 234 | Protein_20 | Tn3 family transposase ISPsy39 | Transposase |
| J1F19_RS23770 () | 16149..16376 | - | 228 | Protein_21 | transposase | - |
| J1F19_RS23775 () | 16431..17135 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS23780 () | 17305..17586 | - | 282 | Protein_23 | transposase zinc-binding domain-containing protein | - |
| J1F19_RS23785 () | 17733..18593 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| J1F19_RS23790 () | 18776..19114 | - | 339 | Protein_25 | Tn3 family transposase TnpR_Tn3 | Transposase |
| J1F19_RS23795 () | 19178..19882 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS23800 () | 20004..20909 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| J1F19_RS23805 () | 20906..22144 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| J1F19_RS23810 () | 22144..22728 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| J1F19_RS23815 () | 23221..23985 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| J1F19_RS23820 () | 24212..24517 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| J1F19_RS23825 () | 24528..25733 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| J1F19_RS23830 () | 25889..26092 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| J1F19_RS23835 () | 26220..27059 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| J1F19_RS23840 () | 27053..27400 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| J1F19_RS23845 () | 27606..28394 | - | 789 | WP_000503573.1 | hypothetical protein | ARG |
| J1F19_RS23850 () | 28525..28998 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| J1F19_RS23855 () | 29156..30169 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| J1F19_RS23860 () | 30240..30944 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS23865 () | 30998..32035 | + | 1038 | Protein_40 | IS4 family transposase IS10R | Transposase |
| J1F19_RS23870 () | 32045..32416 | - | 372 | WP_035689358.1 | HTH-type transcriptional activator RhaR | VF |
| J1F19_RS23875 () | 32549..33142 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| J1F19_RS23880 () | 33255..34460 | - | 1206 | WP_001089068.1 | Multidrug resistance protein MdtG | ARG |
| J1F19_RS23885 () | 34542..35165 | + | 624 | WP_000088605.1 | hypothetical protein | VF |
| J1F19_RS23890 () | 35143..35829 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| J1F19_RS23895 () | 35837..36223 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| J1F19_RS23900 () | 36216..36479 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| J1F19_RS23905 () | 36476..37173 | - | 698 | Protein_48 | IS1 family transposase IS1R | Transposase |
| J1F19_RS23910 () | 37518..38222 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS23915 () | 38289..39260 | - | 972 | Protein_50 | IS3 family transposase | - |
| J1F19_RS23920 () | 39285..39989 | + | 705 | WP_142435041.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS23925 () | 40047..40577 | - | 531 | Protein_52 | histidine-type phosphatase | - |
| J1F19_RS23930 () | 40699..41184 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| J1F19_RS23935 () | 41209..41694 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| J1F19_RS23940 () | 41681..42376 | - | 696 | WP_000117262.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| J1F19_RS23945 () | 42381..43511 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| J1F19_RS23950 () | 43501..44784 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| J1F19_RS23955 () | 44787..46166 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| J1F19_RS23960 () | 46270..46797 | - | 528 | WP_000178050.1 | iron transporter | - |
| J1F19_RS23965 () | 46838..48724 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| J1F19_RS23970 () | 49071..49886 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| J1F19_RS23975 () | 50069..50575 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| J1F19_RS23980 () | 50565..50723 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| J1F19_RS23985 () | 50873..50986 | - | 114 | Protein_64 | IS6 family transposase | - |
| J1F19_RS23990 () | 51186..51883 | + | 698 | Protein_65 | IS1 family transposase IS1X2 | Transposase |
| J1F19_RS23995 () | 51898..52032 | + | 135 | Protein_66 | IS4 family transposase | - |
| J1F19_RS24000 () | 52094..52798 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS24005 () | 52848..53567 | + | 720 | Protein_68 | AAA family ATPase | - |
| J1F19_RS24010 () | 53554..54405 | + | 852 | WP_000240536.1 | replication protein | - |
| J1F19_RS24015 () | 54713..55528 | + | 816 | WP_001043265.1 | hypothetical protein | ARG |
| J1F19_RS24020 () | 55589..56392 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| J1F19_RS24025 () | 56392..57228 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| J1F19_RS24030 () | 57289..57993 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J1F19_RS24035 () | 58058..59308 | - | 1251 | Protein_74 | transposase | - |
| J1F19_RS24040 () | 59383..60051 | - | 669 | WP_001300294.1 | hypothetical protein | VF |
| J1F19_RS24045 () | 60087..60323 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| J1F19_RS24050 () | 60320..60682 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| J1F19_RS24055 () | 60700..62394 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| J1F19_RS24060 () | 62446..62868 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| J1F19_RS24065 () | 62904..63179 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| J1F19_RS24070 () | 63193..63543 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| J1F19_RS24075 () | 63615..64049 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| J1F19_RS24080 () | 64156..64853 | - | 698 | Protein_83 | IS1 family transposase IS1R | Transposase |
| J1F19_RS24085 () | 65102..65503 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| J1F19_RS24090 () | 65436..65693 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| J1F19_RS24095 () | 65786..66439 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| J1F19_RS24100 () | 67653..67865 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| J1F19_RS24105 () | 67996..68358 | - | 363 | Protein_88 | fertility inhibition protein FinO | - |
| J1F19_RS24110 () | 68354..71605 | - | 3252 | Protein_89 | hypothetical protein | Relaxase |
| J1F19_RS24115 () | 71605..73287 | - | 1683 | WP_141010234.1 | type IV conjugative transfer system coupling protein TraD | - |
| J1F19_RS24120 () | 73193..74935 | - | 1743 | WP_001542065.1 | conjugal transfer mating pair stabilization protein TraG | - |
| J1F19_RS24125 () | 74929..75019 | - | 91 | Protein_92 | conjugal transfer protein TraB | - |
| J1F19_RS24130 () | 75015..75467 | - | 453 | Protein_93 | DNA methylase | - |
| J1F19_RS24135 () | 75544..75848 | - | 305 | Protein_94 | hypothetical protein | - |
| J1F19_RS24140 () | 75852..76754 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| J1F19_RS24145 () | 77449..78420 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J1F19_RS24150 () | 78420..79586 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| J1F19_RS24155 () | 80174..80929 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| J1F19_RS24160 () | 81703..82509 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| J1F19_RS24165 () | 82510..82815 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| J1F19_RS24170 () | 82817..83035 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| J1F19_RS24175 () | 83743..84738 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| J1F19_RS24180 () | 84742..85674 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| J1F19_RS24185 () | 85967..86152 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| J1F19_RS24190 () | 86153..87055 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| J1F19_RS24195 () | 87057..87926 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| J1F19_RS24200 () | 87983..89548 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| J1F19_RS24205 () | 89835..90347 | + | 513 | WP_001586228.1 | hypothetical protein | - |
| J1F19_RS24210 () | 90381..91514 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| J1F19_RS24215 () | 91681..92453 | - | 773 | Protein_110 | hypothetical protein | - |
| J1F19_RS24220 () | 92482..92967 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| J1F19_RS24225 () | 93358..95979 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| J1F19_RS24230 () | 96178..96408 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| J1F19_RS24235 () | 96497..96772 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | - |
| J1F19_RS24240 () | 96777..96994 | - | 218 | Protein_115 | transposase | - |
| J1F19_RS24245 () | 96995..97525 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | - |
| J1F19_RS24250 () | 97529..97798 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|