MGE detailed information
MGE type: Genomic_island MGE length: 21047 bp
Accession: NZ_CP070980 Location: 3869854..3890900 Organism: Pseudomonas rhodesiae strain AAMF24 Replicon: chromosome
Accession: NZ_CP070980 Location: 3869854..3890900 Organism: Pseudomonas rhodesiae strain AAMF24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYG35_RS17405 (JYG35_17405) | 3864916..3865722 | - | 807 | WP_034099022.1 | ABC transporter substrate-binding protein | - |
| JYG35_RS17410 (JYG35_17410) | 3865784..3866452 | - | 669 | WP_047882629.1 | GntR family transcriptional regulator | - |
| JYG35_RS17415 (JYG35_17415) | 3866742..3869147 | - | 2406 | WP_213547480.1 | TonB-dependent receptor | - |
| JYG35_RS17420 (JYG35_17420) | 3869854..3870517 | + | 664 | Protein_3446 | site-specific integrase | - |
| JYG35_RS17430 (JYG35_17430) | 3870996..3871559 | - | 564 | WP_034099035.1 | hypothetical protein | - |
| JYG35_RS17435 (JYG35_17435) | 3871543..3872949 | - | 1407 | WP_034111069.1 | hypothetical protein | - |
| JYG35_RS17440 (JYG35_17440) | 3872946..3875897 | - | 2952 | WP_034099039.1 | hypothetical protein | - |
| JYG35_RS17445 (JYG35_17445) | 3875897..3876748 | - | 852 | WP_034114387.1 | hypothetical protein | - |
| JYG35_RS26520 | 3876968..3877087 | + | 120 | Protein_3451 | IS5 family transposase ISPal1 | Transposase |
| JYG35_RS17450 (JYG35_17450) | 3877172..3877408 | - | 237 | WP_034099043.1 | YdaS family helix-turn-helix protein | - |
| JYG35_RS17455 (JYG35_17455) | 3877507..3877932 | + | 426 | WP_005789662.1 | helix-turn-helix domain-containing protein | - |
| JYG35_RS17460 (JYG35_17460) | 3877984..3878301 | - | 318 | WP_034099046.1 | transcriptional regulator | Antitoxin Detail |
| JYG35_RS17465 (JYG35_17465) | 3878298..3878642 | - | 345 | WP_034114384.1 | toxin | Toxin Detail |
| JYG35_RS17470 (JYG35_17470) | 3878765..3879568 | - | 804 | WP_034114382.1 | phage antirepressor KilAC domain-containing protein | - |
| JYG35_RS17475 (JYG35_17475) | 3879646..3879876 | - | 231 | WP_236238667.1 | DUF3077 domain-containing protein | - |
| JYG35_RS17480 (JYG35_17480) | 3879950..3880105 | - | 156 | WP_143506426.1 | Arc family DNA-binding protein | - |
| JYG35_RS17485 (JYG35_17485) | 3880250..3880681 | + | 432 | WP_052229582.1 | helix-turn-helix domain-containing protein | - |
| JYG35_RS17490 (JYG35_17490) | 3881170..3881802 | - | 633 | WP_143506428.1 | hypothetical protein | - |
| JYG35_RS17495 (JYG35_17495) | 3882003..3882476 | + | 474 | WP_034114380.1 | hypothetical protein | - |
| JYG35_RS17500 (JYG35_17500) | 3882582..3882869 | + | 288 | WP_034099056.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JYG35_RS17505 (JYG35_17505) | 3882859..3883146 | + | 288 | WP_034099058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JYG35_RS17510 (JYG35_17510) | 3883186..3883950 | - | 765 | WP_034099060.1 | KilA-N domain-containing protein | - |
| JYG35_RS17515 (JYG35_17515) | 3884063..3884281 | - | 219 | WP_034099062.1 | hypothetical protein | - |
| JYG35_RS17520 (JYG35_17520) | 3884304..3884612 | - | 309 | WP_034114377.1 | hypothetical protein | - |
| JYG35_RS26525 | 3884690..3884900 | - | 211 | Protein_3467 | hypothetical protein | - |
| JYG35_RS17525 (JYG35_17525) | 3885727..3885960 | + | 234 | WP_034099068.1 | Arc family DNA-binding protein | - |
| JYG35_RS17530 (JYG35_17530) | 3886112..3886459 | + | 348 | WP_034099069.1 | hypothetical protein | - |
| JYG35_RS26530 | 3886548..3886868 | + | 321 | WP_249745166.1 | hypothetical protein | - |
| JYG35_RS17535 (JYG35_17535) | 3886754..3887935 | + | 1182 | WP_249745106.1 | hypothetical protein ; Integrase | Integrase |
| JYG35_RS17540 (JYG35_17540) | 3888302..3889411 | - | 1110 | WP_034099071.1 | MFS transporter | - |
| JYG35_RS17545 (JYG35_17545) | 3889557..3890480 | - | 924 | WP_034099072.1 | LysR substrate-binding domain-containing protein | - |
| JYG35_RS17550 (JYG35_17550) | 3890986..3892362 | + | 1377 | WP_034099074.1 | MFS family transporter | - |
| JYG35_RS17555 (JYG35_17555) | 3892425..3893879 | - | 1455 | WP_034114375.1 | alanine/glycine:cation symporter family protein | - |
| JYG35_RS17560 (JYG35_17560) | 3894046..3894939 | - | 894 | WP_258695809.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|