MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62882 bp
Accession: NZ_CP070957 Location: 1..62882 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P3
Accession: NZ_CP070957 Location: 1..62882 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYG65_RS22630 (JYG65_22545) | 22..516 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| JYG65_RS22635 (JYG65_22550) | 541..2079 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| JYG65_RS22640 (JYG65_22555) | 2070..3179 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JYG65_RS22645 (JYG65_22560) | 3224..3781 | + | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| JYG65_RS22650 (JYG65_22565) | 3847..4329 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| JYG65_RS22655 (JYG65_22570) | 4333..4968 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JYG65_RS22660 (JYG65_22575) | 4981..6297 | + | 1317 | WP_021500066.1 | hypothetical protein | VF |
| JYG65_RS22665 (JYG65_22580) | 6276..6605 | - | 330 | WP_001141248.1 | hypothetical protein | - |
| JYG65_RS22670 (JYG65_22590) | 7215..8339 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| JYG65_RS22675 (JYG65_22595) | 8351..9004 | + | 654 | WP_170852113.1 | hypothetical protein | - |
| JYG65_RS22680 (JYG65_22600) | 9034..9566 | + | 533 | Protein_11 | thermonuclease family protein | - |
| JYG65_RS22685 (JYG65_22605) | 9661..11337 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| JYG65_RS22690 (JYG65_22610) | 11507..12082 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| JYG65_RS22695 (JYG65_22615) | 12087..14252 | + | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| JYG65_RS22700 (JYG65_22620) | 14321..14527 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| JYG65_RS22705 (JYG65_22625) | 14873..15313 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| JYG65_RS22710 (JYG65_22630) | 15272..16045 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| JYG65_RS22715 (JYG65_22635) | 16117..17742 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| JYG65_RS22720 (JYG65_22640) | 17963..22276 | - | 4314 | WP_034169409.1 | hypothetical protein | - |
| JYG65_RS22725 (JYG65_22645) | 22273..22614 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| JYG65_RS22730 (JYG65_22650) | 22982..23383 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| JYG65_RS22735 (JYG65_22655) | 23401..24153 | + | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| JYG65_RS22740 (JYG65_22660) | 24155..24862 | + | 708 | WP_021503228.1 | hypothetical protein | - |
| JYG65_RS22745 (JYG65_22665) | 24882..25208 | + | 327 | WP_063078684.1 | hypothetical protein | - |
| JYG65_RS22750 (JYG65_22670) | 25339..25776 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JYG65_RS22755 (JYG65_22675) | 25801..25983 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| JYG65_RS22760 | 26280..26723 | + | 444 | WP_000068545.1 | hypothetical protein | - |
| JYG65_RS22765 (JYG65_22685) | 26830..27096 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JYG65_RS22770 (JYG65_22690) | 27516..27794 | - | 279 | WP_000545938.1 | hypothetical protein | - |
| JYG65_RS22775 (JYG65_22695) | 28344..28595 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| JYG65_RS22780 (JYG65_22700) | 28585..28845 | - | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| JYG65_RS22785 (JYG65_22705) | 28897..29121 | - | 225 | WP_000814381.1 | hypothetical protein | - |
| JYG65_RS22790 (JYG65_22710) | 29218..29427 | - | 210 | WP_000866036.1 | hypothetical protein | - |
| JYG65_RS22795 (JYG65_22715) | 29628..30738 | - | 1111 | Protein_34 | IS4 family transposase IS186B | Transposase |
| JYG65_RS22800 (JYG65_22720) | 30816..31139 | - | 324 | WP_000427403.1 | hypothetical protein | - |
| JYG65_RS22805 (JYG65_22725) | 31721..32049 | - | 329 | Protein_36 | hypothetical protein | - |
| JYG65_RS22810 | 32643..32870 | + | 228 | WP_001415811.1 | Iron-sulfur cluster carrier protein | VF |
| JYG65_RS22815 | 32885..33307 | + | 423 | WP_032163980.1 | hypothetical protein | - |
| JYG65_RS22820 (JYG65_22735) | 33381..33665 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| JYG65_RS22825 (JYG65_22740) | 33683..34279 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| JYG65_RS22830 (JYG65_22745) | 34429..34551 | - | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| JYG65_RS22835 | 34496..34648 | - | 153 | Protein_42 | DUF5431 family protein | - |
| JYG65_RS22840 | 35296..35486 | - | 191 | Protein_43 | hypothetical protein | - |
| JYG65_RS22845 (JYG65_22750) | 36185..37213 | - | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| JYG65_RS22850 (JYG65_22755) | 38353..38805 | + | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| JYG65_RS22855 (JYG65_22760) | 38798..39013 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| JYG65_RS22860 (JYG65_22765) | 39006..39182 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| JYG65_RS22865 (JYG65_22770) | 39209..40162 | + | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| JYG65_RS22870 (JYG65_22775) | 40536..40979 | + | 444 | WP_000964330.1 | NfeD family protein | - |
| JYG65_RS22875 (JYG65_22780) | 40983..41153 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| JYG65_RS22880 (JYG65_22785) | 41164..41610 | + | 447 | WP_001243165.1 | hypothetical protein | - |
| JYG65_RS22885 (JYG65_22790) | 41643..41900 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| JYG65_RS22890 (JYG65_22795) | 41881..42183 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| JYG65_RS22895 (JYG65_22800) | 42180..42437 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| JYG65_RS22900 (JYG65_22805) | 42441..43436 | + | 996 | WP_001028543.1 | type IV secretion system protein | - |
| JYG65_RS22905 (JYG65_22810) | 43442..44083 | + | 642 | WP_001425343.1 | hypothetical protein | VF |
| JYG65_RS22910 (JYG65_22815) | 44085..44339 | + | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| JYG65_RS22915 (JYG65_22820) | 44352..44639 | + | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| JYG65_RS22920 (JYG65_22825) | 44712..45347 | + | 636 | WP_015059536.1 | hypothetical protein | - |
| JYG65_RS22925 (JYG65_22830) | 45447..45698 | + | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| JYG65_RS22930 (JYG65_22835) | 45688..45969 | + | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JYG65_RS22935 (JYG65_22840) | 46037..46336 | + | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JYG65_RS22940 (JYG65_22845) | 46339..47574 | + | 1236 | WP_015059538.1 | hypothetical protein | VF |
| JYG65_RS22945 (JYG65_22850) | 47580..48017 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| JYG65_RS22950 (JYG65_22855) | 48136..48534 | + | 399 | WP_001153665.1 | hypothetical protein | - |
| JYG65_RS22955 (JYG65_22860) | 48555..49139 | + | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| JYG65_RS22960 | 49139..49429 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| JYG65_RS22965 (JYG65_22870) | 49500..49820 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| JYG65_RS22970 (JYG65_22875) | 49826..52183 | + | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| JYG65_RS22975 (JYG65_22880) | 52349..53083 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| JYG65_RS22980 (JYG65_22885) | 53080..53850 | + | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| JYG65_RS22985 (JYG65_22890) | 53840..54979 | + | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| JYG65_RS22990 (JYG65_22895) | 54998..56053 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| JYG65_RS22995 (JYG65_22900) | 56069..58027 | + | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JYG65_RS23000 (JYG65_22905) | 58074..58610 | + | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| JYG65_RS23005 (JYG65_22910) | 58603..60246 | + | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| JYG65_RS23010 (JYG65_22915) | 60297..60713 | + | 417 | WP_223674109.1 | type 4b pilus protein PilO2 | - |
| JYG65_RS23015 (JYG65_22920) | 60739..61952 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|