MGE detailed information
MGE type: Mobilizable plasmid MGE length: 143778 bp
Accession: NZ_CP070955 Location: 1..143778 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P1
Accession: NZ_CP070955 Location: 1..143778 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JYG65_RS21265 (JYG65_21185) | 49..2211 | + | 2163 | Protein_0 | Tn3 family transposase TnpA_TnAs1 | Transposase |
JYG65_RS21270 (JYG65_21190) | 2269..2511 | + | 243 | WP_000844627.1 | transposase | - |
JYG65_RS21275 (JYG65_21195) | 2543..3193 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
JYG65_RS21280 (JYG65_21200) | 3299..4498 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
JYG65_RS21285 (JYG65_21205) | 4530..5414 | - | 885 | WP_000058717.1 | EamA family transporter | - |
JYG65_RS21290 (JYG65_21210) | 5552..5944 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
JYG65_RS21295 (JYG65_21215) | 5948..7699 | + | 1752 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
JYG65_RS21300 (JYG65_21220) | 7780..8103 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
JYG65_RS21305 (JYG65_21225) | 8208..9287 | + | 1080 | WP_001611006.1 | permease | - |
JYG65_RS21310 (JYG65_21230) | 9580..10197 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
JYG65_RS21315 (JYG65_21235) | 10389..11945 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
JYG65_RS21320 (JYG65_21240) | 12208..12798 | - | 591 | WP_000194575.1 | hypothetical protein | - |
JYG65_RS21325 (JYG65_21245) | 12798..13055 | - | 258 | WP_000343085.1 | hypothetical protein | - |
JYG65_RS21330 (JYG65_21250) | 13409..15547 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
JYG65_RS21335 (JYG65_21255) | 15709..16125 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
JYG65_RS21340 (JYG65_21260) | 16122..16352 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
JYG65_RS21345 (JYG65_21265) | 16648..16938 | + | 291 | WP_000111771.1 | hypothetical protein | - |
JYG65_RS21350 (JYG65_21270) | 16928..17827 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
JYG65_RS21355 (JYG65_21275) | 17877..20102 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
JYG65_RS21360 (JYG65_21280) | 20104..21192 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
JYG65_RS21365 (JYG65_21285) | 21354..21458 | + | 105 | Protein_20 | transcriptional regulator | - |
JYG65_RS21370 (JYG65_21290) | 21579..22319 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
JYG65_RS21375 (JYG65_21295) | 22604..23581 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
JYG65_RS21380 (JYG65_21300) | 24327..24650 | + | 324 | Protein_23 | IS21 family transposase IS21 | Transposase |
JYG65_RS21385 (JYG65_21305) | 24652..24756 | + | 105 | Protein_24 | AAA family ATPase | - |
JYG65_RS21390 (JYG65_21310) | 24817..25330 | + | 514 | Protein_25 | DUF4113 domain-containing protein | - |
JYG65_RS21400 (JYG65_21320) | 26563..27477 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
JYG65_RS21405 (JYG65_21325) | 27477..28304 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
JYG65_RS21410 (JYG65_21330) | 28301..29158 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
JYG65_RS21415 (JYG65_21335) | 29155..30012 | + | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
JYG65_RS21420 (JYG65_21340) | 30246..30503 | - | 258 | Protein_31 | Tn3 family transposase | - |
JYG65_RS21425 (JYG65_21345) | 30501..30632 | + | 132 | Protein_32 | phosphopyruvate hydratase | - |
JYG65_RS21430 (JYG65_21350) | 30605..30856 | - | 252 | WP_000163248.1 | hypothetical protein | - |
JYG65_RS21435 (JYG65_21355) | 31296..31775 | - | 480 | WP_000190053.1 | hypothetical protein | - |
JYG65_RS21440 (JYG65_21360) | 31917..32342 | + | 426 | WP_012300440.1 | hypothetical protein | - |
JYG65_RS21445 (JYG65_21365) | 32976..33673 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
JYG65_RS21450 (JYG65_21370) | 33973..35139 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
JYG65_RS21455 (JYG65_21375) | 35139..36110 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
JYG65_RS21460 | 36747..36916 | + | 170 | Protein_39 | hypothetical protein | - |
JYG65_RS21465 (JYG65_21380) | 36913..37260 | + | 348 | WP_001350917.1 | hypothetical protein | - |
JYG65_RS21470 (JYG65_21385) | 37329..37664 | + | 336 | WP_000343070.1 | hypothetical protein | - |
JYG65_RS21475 (JYG65_21390) | 37715..38412 | + | 698 | WP_223369285.1 | IS1-like element IS1A family transposase | - |
JYG65_RS21480 (JYG65_21395) | 38465..39436 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
JYG65_RS21485 (JYG65_21400) | 39838..40263 | + | 426 | WP_001198922.1 | antirestriction protein | - |
JYG65_RS21490 (JYG65_21405) | 40263..40724 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
JYG65_RS21495 (JYG65_21410) | 40724..40906 | + | 183 | WP_001027505.1 | hypothetical protein | - |
JYG65_RS21500 | 41130..41383 | - | 254 | Protein_47 | hypothetical protein | - |
JYG65_RS21505 (JYG65_21420) | 41900..42130 | + | 231 | WP_000218642.1 | hypothetical protein | - |
JYG65_RS21510 (JYG65_21425) | 42182..43543 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
JYG65_RS21515 (JYG65_21430) | 43589..44152 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
JYG65_RS21520 (JYG65_21435) | 44238..44378 | - | 141 | Protein_51 | pilus protein | - |
JYG65_RS21525 (JYG65_21440) | 44545..46211 | - | 1667 | Protein_52 | group II intron reverse transcriptase/maturase | - |
JYG65_RS21530 (JYG65_21445) | 47362..47797 | + | 436 | Protein_53 | post-segregation killing protein PndC | - |
JYG65_RS21535 (JYG65_21450) | 47891..48157 | + | 267 | WP_001247862.1 | hypothetical protein | - |
JYG65_RS21540 (JYG65_21455) | 48222..49163 | + | 942 | WP_063320171.1 | Recombination-promoting nuclease RpnA | VF |
JYG65_RS21545 (JYG65_21460) | 49225..49431 | + | 207 | WP_021545175.1 | hypothetical protein | VF |
JYG65_RS21550 (JYG65_21465) | 49462..49713 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
JYG65_RS21555 (JYG65_21475) | 50293..51141 | + | 849 | WP_125282800.1 | DUF4942 domain-containing protein | - |
JYG65_RS21560 (JYG65_21480) | 51227..51562 | - | 336 | WP_024133211.1 | hypothetical protein | - |
JYG65_RS21565 (JYG65_21485) | 51797..52130 | + | 334 | Protein_60 | IncI1-type relaxosome accessory protein NikA | - |
JYG65_RS21570 (JYG65_21490) | 52141..54840 | + | 2700 | WP_236942042.1 | Protein TraI | Relaxase |
JYG65_RS21575 (JYG65_21495) | 54878..55614 | - | 737 | Protein_62 | conjugal transfer protein TrbC | - |
JYG65_RS21580 (JYG65_21500) | 55611..55909 | - | 299 | Protein_63 | IS481 family transposase ISKpn28 | Transposase |
JYG65_RS21585 (JYG65_21505) | 55945..57318 | - | 1374 | WP_223674118.1 | IS4 family transposase ISEc13 | Transposase |
JYG65_RS21590 (JYG65_21510) | 57755..57931 | + | 177 | Protein_65 | IS6 family transposase ISEas1 | Transposase |
JYG65_RS21595 (JYG65_21515) | 58000..59961 | + | 1962 | Protein_66 | Hemoglobin-binding protease hbp autotransporter | VF |
JYG65_RS21605 (JYG65_21525) | 61406..61681 | + | 276 | WP_001004201.1 | hypothetical protein | - |
JYG65_RS21610 (JYG65_21530) | 61726..62316 | + | 591 | WP_000578892.1 | hypothetical protein | - |
JYG65_RS21615 (JYG65_21535) | 62324..62581 | + | 258 | WP_001371933.1 | hypothetical protein | - |
JYG65_RS21620 (JYG65_21540) | 62655..63191 | + | 537 | WP_000107168.1 | hypothetical protein | - |
JYG65_RS21625 (JYG65_21545) | 63246..63950 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
JYG65_RS21630 (JYG65_21550) | 64536..64880 | + | 345 | WP_000793307.1 | hypothetical protein | - |
JYG65_RS21635 (JYG65_21555) | 65056..66057 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
JYG65_RS21640 (JYG65_21560) | 66408..66665 | + | 258 | WP_000371888.1 | hypothetical protein | - |
JYG65_RS21645 (JYG65_21565) | 66665..67255 | + | 591 | WP_000194553.1 | hypothetical protein | - |
JYG65_RS21650 (JYG65_21570) | 67275..67622 | - | 348 | WP_001407239.1 | DUF6404 family protein | - |
JYG65_RS21655 (JYG65_21575) | 67741..68088 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
JYG65_RS21660 (JYG65_21580) | 68106..69986 | - | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
JYG65_RS21665 (JYG65_21585) | 70265..70585 | - | 321 | Protein_80 | hypothetical protein | - |
JYG65_RS21670 (JYG65_21590) | 70672..71052 | + | 381 | WP_072157534.1 | IS66 family transposase ISEc8 | Transposase |
JYG65_RS21675 (JYG65_21595) | 71049..71396 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
JYG65_RS21680 (JYG65_21600) | 71446..72983 | + | 1538 | Protein_83 | IS66 family transposase ISEc8 | Transposase |
JYG65_RS21685 (JYG65_21605) | 73020..74060 | - | 1041 | Protein_84 | protein YagA | - |
JYG65_RS21690 (JYG65_21610) | 74414..75016 | + | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
JYG65_RS21695 (JYG65_21615) | 75072..75566 | + | 495 | WP_001459505.1 | hypothetical protein | - |
JYG65_RS21700 (JYG65_21620) | 75566..75832 | + | 267 | WP_000955263.1 | hypothetical protein | - |
JYG65_RS21705 (JYG65_21625) | 76309..76782 | - | 474 | WP_001334658.1 | hypothetical protein | - |
JYG65_RS21710 (JYG65_21630) | 76899..77747 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
JYG65_RS21715 (JYG65_21635) | 77787..78065 | - | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
JYG65_RS21720 (JYG65_21640) | 78065..78334 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
JYG65_RS21725 (JYG65_21645) | 78389..78547 | - | 159 | WP_000841008.1 | hypothetical protein | - |
JYG65_RS21730 (JYG65_21650) | 79243..80274 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
JYG65_RS21735 (JYG65_21655) | 81232..81510 | + | 279 | WP_219065241.1 | ash family protein | - |
JYG65_RS21740 (JYG65_21660) | 81428..81715 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
JYG65_RS21745 (JYG65_21665) | 82157..82690 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
JYG65_RS21750 (JYG65_21670) | 82944..83627 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
JYG65_RS21755 (JYG65_21675) | 83641..84207 | + | 567 | WP_000776428.1 | protein TraD | - |
JYG65_RS21760 (JYG65_21680) | 84475..84729 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
JYG65_RS21765 (JYG65_21685) | 84772..85224 | + | 453 | WP_000008892.1 | hypothetical protein | - |
JYG65_RS21770 (JYG65_21690) | 85898..86965 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
JYG65_RS21775 (JYG65_21695) | 86965..87402 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
JYG65_RS21780 (JYG65_21700) | 87416..87865 | + | 450 | Protein_103 | hypothetical protein | VF |
JYG65_RS21785 (JYG65_21705) | 87920..89133 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
JYG65_RS21790 (JYG65_21710) | 89136..89969 | - | 834 | WP_223671672.1 | hypothetical protein | - |
JYG65_RS21795 (JYG65_21715) | 89966..90784 | - | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
JYG65_RS21800 (JYG65_21720) | 91427..91582 | + | 156 | WP_152921935.1 | IS6 family transposase IS15 | Transposase |
JYG65_RS21805 (JYG65_21725) | 91594..92298 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
JYG65_RS21810 (JYG65_21730) | 92994..93698 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
JYG65_RS21815 (JYG65_21735) | 93762..94526 | - | 765 | Protein_110 | DNA (cytosine-5-)-methyltransferase | - |
JYG65_RS21820 (JYG65_21740) | 94620..94892 | + | 273 | Protein_111 | IS1 family transposase | - |
JYG65_RS21825 (JYG65_21745) | 94969..95666 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
JYG65_RS21830 (JYG65_21750) | 95876..96664 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
JYG65_RS21835 (JYG65_21755) | 96795..97268 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
JYG65_RS21840 (JYG65_21760) | 97426..98439 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
JYG65_RS21845 (JYG65_21765) | 98642..98992 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
JYG65_RS21850 (JYG65_21770) | 99212..99916 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
JYG65_RS21855 (JYG65_21775) | 99946..100506 | + | 561 | WP_086621289.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
JYG65_RS21860 (JYG65_21780) | 100509..103475 | + | 2967 | WP_223671579.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
JYG65_RS21865 (JYG65_21785) | 103472..103624 | - | 153 | WP_170938748.1 | hypothetical protein | - |
JYG65_RS21870 (JYG65_21790) | 103686..104024 | - | 339 | WP_223231361.1 | HNH endonuclease signature motif containing protein | - |
JYG65_RS21875 (JYG65_21795) | 104787..105641 | + | 855 | WP_074149649.1 | hypothetical protein | - |
JYG65_RS21880 (JYG65_21800) | 105638..107677 | + | 2040 | WP_032192809.1 | ATP-dependent helicase | - |
JYG65_RS21885 (JYG65_21805) | 107990..108289 | - | 300 | WP_001572440.1 | hypothetical protein | - |
JYG65_RS21890 (JYG65_21810) | 108344..108581 | - | 238 | Protein_125 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
JYG65_RS21895 (JYG65_21815) | 109035..109460 | - | 426 | WP_001043843.1 | hypothetical protein | - |
JYG65_RS21900 (JYG65_21820) | 109714..110529 | - | 816 | WP_001572439.1 | HNH endonuclease signature motif containing protein | - |
JYG65_RS21905 (JYG65_21825) | 110542..110952 | - | 411 | WP_000985911.1 | hypothetical protein | - |
JYG65_RS21910 (JYG65_21830) | 111054..111260 | - | 207 | WP_000134171.1 | hypothetical protein | - |
JYG65_RS21915 (JYG65_21835) | 111321..112646 | - | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
JYG65_RS21920 (JYG65_21840) | 112651..112944 | - | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
JYG65_RS21925 (JYG65_21845) | 113548..113940 | - | 393 | WP_000341066.1 | hypothetical protein | - |
JYG65_RS21930 (JYG65_21850) | 114313..114654 | + | 342 | WP_001151575.1 | hypothetical protein | - |
JYG65_RS21935 (JYG65_21855) | 114746..114937 | + | 192 | WP_000398480.1 | hypothetical protein | - |
JYG65_RS21940 (JYG65_21860) | 114987..115268 | + | 282 | WP_223667018.1 | hypothetical protein | - |
JYG65_RS23285 | 115609..115740 | - | 132 | WP_000374059.1 | hypothetical protein | - |
JYG65_RS21945 (JYG65_21865) | 115831..117072 | - | 1242 | WP_001053338.1 | VWA domain-containing protein | - |
JYG65_RS21950 (JYG65_21870) | 117501..118076 | - | 576 | WP_000301242.1 | TerD family protein | - |
JYG65_RS21955 (JYG65_21875) | 118144..118722 | - | 579 | WP_000116678.1 | tellurium resistance membrane protein TerD | - |
JYG65_RS21960 (JYG65_21880) | 118771..119811 | - | 1041 | WP_000255079.1 | tellurium resistance membrane protein TerC | - |
JYG65_RS21965 (JYG65_21885) | 119834..120289 | - | 456 | WP_000007448.1 | tellurite resistance TerB family protein | - |
JYG65_RS21970 (JYG65_21890) | 120312..121469 | - | 1158 | WP_001054787.1 | TerD family protein | - |
JYG65_RS21975 (JYG65_21895) | 121469..122050 | - | 582 | WP_000254136.1 | TerD family protein | - |
JYG65_RS21980 (JYG65_21900) | 122373..123431 | + | 1059 | WP_001035162.1 | ATP-grasp domain-containing protein | - |
JYG65_RS21985 (JYG65_21905) | 123441..124583 | + | 1143 | WP_001285478.1 | phosphoribosyltransferase domain-containing protein | - |
JYG65_RS21990 (JYG65_21910) | 124576..125349 | + | 774 | WP_001040056.1 | hypothetical protein | - |
JYG65_RS21995 (JYG65_21915) | 125351..126430 | + | 1080 | WP_001182411.1 | tellurite-like stress resistance cysteine protease StiP | - |
JYG65_RS22000 (JYG65_21920) | 126430..127386 | + | 957 | WP_000797366.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
JYG65_RS22005 (JYG65_21925) | 127397..128605 | + | 1209 | WP_000506887.1 | DUF4236 domain-containing protein | - |
JYG65_RS22010 (JYG65_21930) | 128623..129090 | + | 468 | WP_001176767.1 | tellurium resistance protein TerW | - |
JYG65_RS22015 (JYG65_21935) | 129553..130191 | + | 639 | WP_001388628.1 | VWA domain-containing protein | - |
JYG65_RS22020 (JYG65_21940) | 130214..130855 | + | 642 | WP_000116681.1 | TerD family protein | - |
JYG65_RS22025 (JYG65_21945) | 130855..131493 | + | 639 | WP_001253658.1 | VWA domain-containing protein | - |
JYG65_RS22030 (JYG65_21950) | 131579..132619 | + | 1041 | WP_001253653.1 | TerY-C metal binding domain-containing protein | - |
JYG65_RS22035 (JYG65_21955) | 132619..134256 | + | 1638 | WP_000081622.1 | PP2C family serine/threonine-protein phosphatase | - |
JYG65_RS22040 (JYG65_21960) | 134282..135781 | + | 1500 | WP_001284313.1 | lipopolysaccharide kinase InaA family protein | - |
JYG65_RS22045 (JYG65_21965) | 135948..137030 | - | 1083 | WP_001232449.1 | hypothetical protein | - |
JYG65_RS22050 (JYG65_21970) | 137391..137602 | - | 212 | Protein_158 | Hha/YmoA family nucleoid-associated regulatory protein | - |
JYG65_RS22055 (JYG65_21975) | 137773..138954 | + | 1182 | WP_000795946.1 | tyrosine-type recombinase/integrase | - |
JYG65_RS22060 (JYG65_21980) | 138976..139320 | - | 345 | WP_001805195.1 | hypothetical protein | - |
JYG65_RS22065 (JYG65_21985) | 139256..139765 | - | 510 | WP_223674094.1 | hypothetical protein | - |
JYG65_RS22075 (JYG65_21995) | 141232..141474 | - | 243 | WP_223671697.1 | hypothetical protein | - |
JYG65_RS22080 (JYG65_22000) | 141484..142446 | - | 963 | WP_000119427.1 | DNA replication terminus site-binding protein | - |
JYG65_RS22085 (JYG65_22005) | 142537..142983 | - | 447 | WP_000549069.1 | hypothetical protein | - |
JYG65_RS22090 (JYG65_22010) | 143069..143773 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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