MGE detailed information
MGE type: Mobilizable plasmid MGE length: 102703 bp
Accession: NZ_CP070923 Location: 1..102703 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-3
Accession: NZ_CP070923 Location: 1..102703 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR909_RS24345 () | 1..882 | + | 882 | WP_072647168.1 | RepB family plasmid replication initiator protein | - |
| JR909_RS24350 () | 2419..3632 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| JR909_RS24355 () | 3728..4081 | + | 354 | WP_089586239.1 | hypothetical protein | - |
| JR909_RS24360 () | 4121..4543 | + | 423 | Protein_3 | ppfA | - |
| JR909_RS24365 () | 4569..4709 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| JR909_RS24370 () | 4719..5111 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| JR909_RS24375 () | 5447..6331 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| JR909_RS24380 () | 6624..7433 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| JR909_RS24385 () | 7602..8798 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| JR909_RS24390 () | 8815..9816 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| JR909_RS24395 () | 10042..11748 | + | 1707 | WP_205899295.1 | hypothetical protein | - |
| JR909_RS24400 () | 11808..13397 | + | 1590 | WP_038997104.1 | hypothetical protein | - |
| JR909_RS24405 () | 13407..14222 | + | 816 | WP_001514461.1 | hypothetical protein | - |
| JR909_RS24410 () | 14258..14839 | + | 582 | WP_032203564.1 | hypothetical protein | - |
| JR909_RS24415 () | 14851..15360 | + | 510 | WP_205899296.1 | baseplate protein | - |
| JR909_RS24420 () | 15520..16632 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JR909_RS24425 () | 16826..16981 | - | 156 | WP_032203563.1 | type I toxin-antitoxin system Hok family toxin | - |
| JR909_RS24430 () | 17379..18597 | + | 1219 | Protein_17 | IS3 family transposase | - |
| JR909_RS24435 () | 18618..19634 | + | 1017 | Protein_18 | IS256 family transposase IS1414 | Transposase |
| JR909_RS24440 () | 19682..21856 | - | 2175 | WP_032176963.1 | Catabolite control protein A | VF |
| JR909_RS24445 () | 22190..23014 | + | 825 | WP_032203560.1 | carbon-phosphorus lyase | - |
| JR909_RS24450 () | 23027..24262 | + | 1236 | WP_032177316.1 | MFS transporter | - |
| JR909_RS24455 () | 24295..25008 | + | 714 | WP_032177315.1 | Protein SapB | VF |
| JR909_RS24460 () | 25234..25931 | + | 698 | Protein_23 | IS1 family transposase | - |
| JR909_RS24465 () | 25940..27556 | - | 1617 | Protein_24 | hypothetical protein | Relaxase |
| JR909_RS24470 () | 27567..28289 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| JR909_RS24475 () | 28286..28771 | - | 486 | WP_059039595.1 | hypothetical protein | - |
| JR909_RS24480 () | 29529..30327 | + | 799 | Protein_27 | trhR | - |
| JR909_RS24485 () | 30330..30841 | + | 512 | Protein_28 | hypothetical protein | - |
| JR909_RS24490 () | 31456..32502 | + | 1047 | WP_038999229.1 | thioredoxin family protein | - |
| JR909_RS24495 () | 32492..32785 | + | 294 | Protein_30 | conjugal transfer protein TraH | - |
| JR909_RS24500 () | 32874..33779 | + | 906 | Protein_31 | IS3 family transposase ISEc31 | Transposase |
| JR909_RS24505 () | 33845..35395 | + | 1551 | WP_205899297.1 | IS3 family transposase ISKpn38 | Transposase |
| JR909_RS24510 () | 35457..35702 | + | 246 | Protein_33 | IS91 family transposase ISEc37 | Transposase |
| JR909_RS24515 () | 36286..39801 | + | 3516 | WP_101804085.1 | Outer membrane protein IcsA autotransporter | VF |
| JR909_RS24520 () | 39976..40181 | - | 206 | Protein_35 | transposase | - |
| JR909_RS24525 () | 40171..40371 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| JR909_RS24530 () | 40618..40998 | + | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| JR909_RS24535 () | 40995..41342 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JR909_RS24540 () | 41392..42930 | + | 1539 | WP_197385479.1 | IS66 family transposase ISEc8 | Transposase |
| JR909_RS24545 () | 43111..43398 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR909_RS24550 () | 43395..43646 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JR909_RS24560 () | 45593..47410 | + | 1818 | Protein_43 | helicase | - |
| JR909_RS24565 () | 47444..47884 | + | 441 | WP_009447534.1 | hypothetical protein | - |
| JR909_RS24570 () | 47881..48129 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| JR909_RS24575 () | 48171..49475 | - | 1305 | WP_000006034.1 | SIR2 family protein | - |
| JR909_RS24580 () | 49532..50173 | - | 642 | WP_001376241.1 | hypothetical protein | - |
| JR909_RS24585 () | 50361..50921 | - | 561 | WP_205899298.1 | Ref family protein | - |
| JR909_RS24590 () | 51169..51480 | - | 312 | WP_205899299.1 | lysogeny establishment protein | - |
| JR909_RS24595 () | 51531..52562 | - | 1032 | WP_042032506.1 | site-specific integrase | - |
| JR909_RS24600 () | 52570..52791 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| JR909_RS24605 () | 53427..54124 | - | 698 | Protein_52 | IS1 family transposase IS1R | Transposase |
| JR909_RS24610 () | 54447..55181 | - | 735 | WP_205899303.1 | replication initiation protein RepE | - |
| JR909_RS24615 () | 55214..55911 | + | 698 | Protein_54 | IS1 family transposase | - |
| JR909_RS24620 () | 56561..57258 | - | 698 | Protein_55 | IS1 family transposase | - |
| JR909_RS24625 () | 57338..58318 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| JR909_RS24630 () | 58776..59306 | - | 531 | WP_001327048.1 | 4Fe-4S binding protein | - |
| JR909_RS24635 () | 59303..59899 | - | 597 | WP_032203482.1 | molecular chaperone | - |
| JR909_RS24640 () | 59954..60730 | - | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JR909_RS24645 () | 60723..61349 | - | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| JR909_RS24650 () | 61363..63396 | - | 2034 | Protein_61 | molybdopterin-dependent oxidoreductase | - |
| JR909_RS24655 () | 63414..64111 | - | 698 | Protein_62 | IS1 family transposase | - |
| JR909_RS24660 () | 64282..64491 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| JR909_RS24665 () | 64602..65453 | + | 852 | WP_000611664.1 | hypothetical protein | - |
| JR909_RS24670 () | 65486..65848 | - | 363 | Protein_65 | phage antirepressor KilAC domain-containing protein | - |
| JR909_RS24675 () | 65904..66601 | + | 698 | Protein_66 | IS1 family transposase IS1X2 | Transposase |
| JR909_RS24680 () | 66615..67079 | - | 465 | Protein_67 | hypothetical protein | - |
| JR909_RS24685 () | 67107..67286 | - | 180 | WP_038997082.1 | hypothetical protein | - |
| JR909_RS24690 () | 67291..67671 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JR909_RS24695 () | 67671..67892 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JR909_RS24700 () | 68075..69631 | + | 1557 | WP_038997084.1 | type I restriction-modification system subunit M | - |
| JR909_RS24705 () | 69628..70866 | + | 1239 | WP_038997080.1 | restriction endonuclease subunit S | - |
| JR909_RS24710 () | 70988..74104 | + | 3117 | WP_205899300.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JR909_RS24715 () | 74371..74877 | - | 507 | WP_038997075.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| JR909_RS24720 () | 74950..76212 | - | 1263 | WP_038997073.1 | hypothetical protein | - |
| JR909_RS24725 () | 76747..77444 | + | 698 | Protein_76 | IS1 family transposase | - |
| JR909_RS24730 () | 77460..77651 | - | 192 | Protein_77 | PerC family transcriptional regulator | - |
| JR909_RS24735 () | 77741..78475 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| JR909_RS24740 () | 78630..78770 | - | 141 | Protein_79 | L-threonine dehydrogenase | - |
| JR909_RS24750 () | 80098..80681 | - | 584 | Protein_81 | IS1 family transposase | - |
| JR909_RS24755 () | 80881..84354 | - | 3474 | WP_104692566.1 | cellulose biosynthesis protein BcsC | - |
| JR909_RS24760 () | 84821..85207 | - | 387 | Protein_83 | IS200/IS605 family transposase | - |
| JR909_RS24765 () | 85395..86740 | - | 1346 | Protein_84 | group II intron reverse transcriptase/maturase | - |
| JR909_RS24770 () | 87484..89634 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| JR909_RS24775 () | 89698..91803 | - | 2106 | WP_052248696.1 | UDP-forming cellulose synthase catalytic subunit | - |
| JR909_RS24780 () | 91884..92580 | + | 697 | Protein_87 | IS1 family transposase | - |
| JR909_RS24785 () | 92627..93973 | - | 1347 | WP_158666848.1 | GGDEF domain-containing protein | - |
| JR909_RS24790 () | 93963..96296 | - | 2334 | WP_205899301.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| JR909_RS24795 () | 96806..97178 | + | 373 | Protein_90 | IS1 family transposase IS1N | Transposase |
| JR909_RS24800 () | 97192..97800 | + | 609 | Protein_91 | IS21 family transposase IS100kyp | Transposase |
| JR909_RS24805 () | 97797..98578 | + | 782 | Protein_92 | IS21 family transposase IS100kyp | Transposase |
| JR909_RS24810 () | 98670..98792 | - | 123 | Protein_93 | IS66 family insertion sequence element accessory protein TnpB | - |
| JR909_RS24815 () | 98856..99491 | + | 636 | WP_205899302.1 | IS6 family transposase IS15DI | Transposase |
| JR909_RS24820 () | 99905..102288 | - | 2384 | Protein_95 | DUF4165 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|