MGE detailed information
MGE type: Conjugative plasmid MGE length: 131966 bp
Accession: NZ_CP070921 Location: 1..131966 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-1
Accession: NZ_CP070921 Location: 1..131966 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR909_RS23085 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JR909_RS23090 () | 1305..2045 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| JR909_RS23095 () | 2166..2354 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| JR909_RS23100 () | 2728..3630 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| JR909_RS23105 () | 3699..4808 | - | 1110 | WP_205899290.1 | SDR family oxidoreductase | - |
| JR909_RS23110 () | 5240..6193 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| JR909_RS23115 () | 7466..7882 | - | 417 | WP_001595315.1 | IS3 family transposase IS1351 | Transposase |
| JR909_RS23120 () | 9597..10784 | + | 1188 | WP_001696612.1 | efflux RND transporter periplasmic adaptor subunit | - |
| JR909_RS23125 () | 10781..12721 | + | 1941 | WP_001610286.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| JR909_RS23130 () | 12725..14095 | + | 1371 | WP_001696614.1 | efflux transporter outer membrane subunit | - |
| JR909_RS23135 () | 14426..15739 | + | 1314 | Protein_10 | IS4 family transposase | - |
| JR909_RS23140 () | 16491..17267 | + | 777 | WP_001610297.1 | hypothetical protein | - |
| JR909_RS23145 () | 17269..19533 | + | 2265 | WP_001610298.1 | UvrD-helicase domain-containing protein | - |
| JR909_RS23150 () | 19784..19888 | + | 105 | Protein_13 | IS3 family transposase IS1351 | Transposase |
| JR909_RS23155 () | 20294..21638 | - | 1345 | Protein_14 | ISNCY family transposase | - |
| JR909_RS23160 () | 21874..22245 | - | 372 | WP_001610302.1 | hypothetical protein | - |
| JR909_RS23165 () | 22288..22755 | - | 468 | WP_001610303.1 | hypothetical protein | - |
| JR909_RS23170 () | 22755..23024 | - | 270 | WP_001610304.1 | hypothetical protein | - |
| JR909_RS23175 () | 23260..24654 | - | 1395 | Protein_18 | ISNCY family transposase ISKpn21 | Transposase |
| JR909_RS23180 () | 24915..25913 | + | 999 | WP_001610306.1 | hypothetical protein | - |
| JR909_RS23185 () | 25917..26834 | + | 918 | WP_001610307.1 | hypothetical protein | - |
| JR909_RS23190 () | 26865..28268 | - | 1404 | WP_001610308.1 | ISNCY family transposase ISKpn21 | Transposase |
| JR909_RS23195 () | 28539..28688 | - | 150 | Protein_22 | IS3 family transposase IS2 | Transposase |
| JR909_RS23200 () | 28866..30059 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| JR909_RS23210 () | 33080..33777 | + | 698 | Protein_25 | IS1 family transposase IS1G | Transposase |
| JR909_RS23215 () | 33914..34207 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| JR909_RS23220 () | 34265..34464 | - | 200 | Protein_27 | lysis protein | - |
| JR909_RS23225 () | 35018..36119 | + | 1102 | Protein_28 | IS481 family transposase ISKpn28 | Transposase |
| JR909_RS23230 () | 37355..38470 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| JR909_RS23235 () | 38610..42269 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| JR909_RS23240 () | 42373..43602 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| JR909_RS23245 () | 43687..44643 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| JR909_RS23250 () | 44688..46865 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| JR909_RS23255 () | 47100..47797 | + | 698 | Protein_34 | IS1 family transposase | - |
| JR909_RS23260 () | 47808..48011 | - | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| JR909_RS23265 () | 47989..48225 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| JR909_RS23270 () | 48497..49609 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JR909_RS23275 () | 50039..50320 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| JR909_RS23280 () | 50493..50660 | + | 168 | Protein_39 | colicin-B | - |
| JR909_RS23285 () | 50678..51205 | - | 528 | WP_205899291.1 | colicin immunity protein Cui | - |
| JR909_RS23290 () | 51449..52030 | + | 582 | Protein_41 | lipid II-degrading bacteriocin colicin M | - |
| JR909_RS23300 () | 53292..53525 | + | 234 | Protein_43 | lipid II-degrading bacteriocin colicin M | - |
| JR909_RS23305 () | 53575..53928 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| JR909_RS23310 () | 54106..54897 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| JR909_RS23315 () | 54894..55583 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| JR909_RS23320 () | 55627..55977 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| JR909_RS23325 () | 56509..60330 | - | 3822 | WP_064055658.1 | hypothetical protein | - |
| JR909_RS23330 () | 60574..60735 | + | 162 | WP_000251882.1 | hypothetical protein | - |
| JR909_RS23335 () | 60753..61100 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| JR909_RS23340 () | 61402..61884 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| JR909_RS23345 () | 62001..62849 | - | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| JR909_RS23350 () | 62895..63176 | - | 282 | WP_000969990.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR909_RS23355 () | 63173..63442 | - | 270 | WP_032072813.1 | prevent host death protein Phd antitoxin | Antitoxin Detail |
| JR909_RS23360 () | 64357..65214 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| JR909_RS23365 () | 65207..65281 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JR909_RS23370 () | 65507..65767 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| JR909_RS23375 () | 66006..66579 | - | 574 | Protein_58 | DUF2726 domain-containing protein | - |
| JR909_RS23380 () | 66617..66826 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| JR909_RS23385 () | 66872..67333 | - | 462 | Protein_60 | thermonuclease family protein | - |
| JR909_RS23390 () | 67576..67788 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| JR909_RS23395 () | 67926..68486 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| JR909_RS23400 () | 68541..69287 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| JR909_RS23405 () | 69307..74577 | - | 5271 | WP_000986979.1 | Multifunctional conjugation protein TraI | Relaxase |
| JR909_RS23410 () | 74577..76766 | - | 2190 | WP_106667887.1 | type IV conjugative transfer system coupling protein TraD | - |
| JR909_RS23415 () | 77019..77750 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| JR909_RS23420 () | 77782..78285 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| JR909_RS23425 () | 78300..81122 | - | 2823 | WP_001007026.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JR909_RS23430 () | 81119..82492 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| JR909_RS23435 () | 82492..82854 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| JR909_RS23440 () | 82784..83329 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JR909_RS23445 () | 83316..83600 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JR909_RS23450 () | 83719..84066 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| JR909_RS23455 () | 84082..84825 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JR909_RS23460 () | 84818..85075 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| JR909_RS23465 () | 85102..86910 | - | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JR909_RS23470 () | 86907..87545 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JR909_RS23475 () | 87573..87968 | - | 396 | WP_097762441.1 | hypothetical protein | - |
| JR909_RS23480 () | 88041..88738 | + | 698 | Protein_79 | IS1 family transposase IS1X2 | Transposase |
| JR909_RS23485 () | 88832..89293 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| JR909_RS23490 () | 89319..90311 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JR909_RS23495 () | 90308..90940 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| JR909_RS23500 () | 90937..91323 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JR909_RS23505 () | 91320..93947 | - | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| JR909_RS23510 () | 94107..94328 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JR909_RS23515 () | 94463..94978 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JR909_RS23520 () | 94975..95226 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| JR909_RS23525 () | 95223..95540 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| JR909_RS23530 () | 95537..96109 | - | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| JR909_RS23535 () | 96099..97526 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| JR909_RS23540 () | 97526..98230 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| JR909_RS23545 () | 98241..98807 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| JR909_RS23550 () | 98829..99140 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JR909_RS23555 () | 99155..99514 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| JR909_RS23560 () | 99548..99775 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| JR909_RS23565 () | 99869..100555 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| JR909_RS23570 () | 100746..101129 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| JR909_RS23575 () | 101406..102053 | + | 648 | WP_000614936.1 | hypothetical protein | VF |
| JR909_RS23580 () | 102350..103171 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| JR909_RS23585 () | 103294..103581 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| JR909_RS23590 () | 103606..103812 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| JR909_RS23595 () | 104503..104661 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 104705..104929 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104705..104929 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104705..104929 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104705..104929 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JR909_RS23600 () | 104741..104929 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JR909_RS23605 () | 104941..105660 | - | 720 | WP_205899292.1 | plasmid SOS inhibition protein A | - |
| JR909_RS23610 () | 105657..106091 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| JR909_RS23615 () | 106146..108104 | - | 1959 | Protein_106 | ParB/RepB/Spo0J family partition protein | - |
| JR909_RS23620 () | 108163..108396 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| JR909_RS23625 () | 108452..108979 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| JR909_RS23630 () | 109449..109721 | - | 273 | WP_072133095.1 | hypothetical protein | - |
| JR909_RS23635 () | 109873..110436 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| JR909_RS23640 () | 110482..111843 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| JR909_RS23645 () | 111895..112125 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JR909_RS23650 () | 112803..113131 | + | 329 | Protein_113 | pilus assembly protein | - |
| JR909_RS23655 () | 113119..113301 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| JR909_RS23660 () | 113301..113762 | - | 462 | WP_171894580.1 | DUF1380 family protein | - |
| JR909_RS23665 () | 113762..114064 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| JR909_RS23670 () | 114589..115560 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| JR909_RS23675 () | 115821..116033 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| JR909_RS23680 () | 116046..116621 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| JR909_RS23685 () | 116690..117028 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| JR909_RS23690 () | 118184..119155 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JR909_RS23695 () | 119155..120321 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| JR909_RS23700 () | 120621..121318 | - | 698 | Protein_123 | IS1 family transposase IS1S | Transposase |
| JR909_RS23705 () | 121653..123155 | - | 1503 | WP_001610277.1 | hypothetical protein | - |
| JR909_RS23710 () | 123384..124081 | - | 698 | Protein_125 | IS1 family transposase IS1S | Transposase |
| JR909_RS23715 () | 124438..125352 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JR909_RS23720 () | 125352..126179 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| JR909_RS23725 () | 126176..127033 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| JR909_RS23730 () | 127030..127887 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| JR909_RS23735 () | 128121..128378 | - | 258 | Protein_130 | Tn3 family transposase | - |
| JR909_RS23740 () | 128376..128789 | + | 414 | Protein_131 | phosphopyruvate hydratase | - |
| JR909_RS23745 () | 129130..129288 | + | 159 | Protein_132 | fluoride efflux transporter CrcB | - |
| JR909_RS23750 () | 129343..130040 | + | 698 | Protein_133 | IS1 family transposase IS1S | Transposase |
| JR909_RS23755 () | 130220..130733 | - | 514 | Protein_134 | DUF4113 domain-containing protein | - |
| JR909_RS23760 () | 130794..130898 | - | 105 | Protein_135 | AAA family ATPase | - |
| JR909_RS23765 () | 130900..131223 | - | 324 | Protein_136 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|