MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP070906 Location: 4386809..4396160 Organism: Escherichia coli strain 88COLEC Replicon: chromosome
Accession: NZ_CP070906 Location: 4386809..4396160 Organism: Escherichia coli strain 88COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR901_RS20820 () | 4381970..4383271 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| JR901_RS20825 () | 4383387..4383725 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| JR901_RS20830 () | 4383701..4385398 | + | 1698 | WP_021557457.1 | protein-disulfide reductase DsbD | - |
| JR901_RS20835 () | 4385435..4386010 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| JR901_RS20845 () | 4386809..4388347 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JR901_RS20850 () | 4388713..4390047 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JR901_RS20855 () | 4390127..4392274 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JR901_RS20860 () | 4392333..4393790 | + | 1458 | WP_021557456.1 | dipeptide/tripeptide permease DtpC | - |
| JR901_RS20865 () | 4394027..4395544 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JR901_RS20870 () | 4395663..4395836 | - | 174 | WP_001672275.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JR901_RS20875 () | 4395864..4396160 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JR901_RS20880 () | 4396387..4396659 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JR901_RS20885 () | 4396671..4396901 | - | 231 | WP_021557455.1 | (4Fe-4S)-binding protein | - |
| JR901_RS20890 () | 4397082..4398713 | + | 1632 | WP_200930391.1 | sensor histidine kinase | - |
| JR901_RS20895 () | 4398710..4399429 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |