MGE detailed information
MGE type: Genomic_island MGE length: 24876 bp
Accession: NZ_CP070281 Location: 4541012..4565887 Organism: Escherichia albertii strain Sample 170 Replicon: chromosome
Accession: NZ_CP070281 Location: 4541012..4565887 Organism: Escherichia albertii strain Sample 170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRC42_RS22280 (4536155) | 4536155..4537165 | + | 1011 | WP_025237944.1 | class II fructose-bisphosphatase | - |
| JRC42_RS22285 (4537262) | 4537262..4538008 | + | 747 | WP_059251589.1 | ferredoxin--NADP(+) reductase | - |
| JRC42_RS22290 (4538013) | 4538013..4538441 | - | 429 | WP_000323550.1 | universal stress protein UspD | - |
| JRC42_RS22295 (4538453) | 4538453..4538752 | - | 300 | WP_000655995.1 | DUF406 domain-containing protein | - |
| JRC42_RS22300 (4538962) | 4538962..4539402 | - | 441 | WP_000155267.1 | DUF805 domain-containing protein | - |
| JRC42_RS22305 (4539503) | 4539503..4540102 | + | 600 | WP_000834911.1 | YiiQ family protein | - |
| JRC42_RS22310 (4540210) | 4540210..4540977 | + | 768 | WP_001216333.1 | triose-phosphate isomerase | - |
| JRC42_RS22315 (4541012) | 4541012..4542301 | - | 1290 | WP_025237946.1 | MFS transporter | - |
| JRC42_RS22320 (4542323) | 4542323..4543795 | - | 1473 | WP_059219124.1 | Arginine utilization regulatory protein RocR | VF |
| JRC42_RS22325 (4543926) | 4543926..4545056 | - | 1131 | WP_025237948.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| JRC42_RS22330 (4545087) | 4545087..4546352 | - | 1266 | WP_204619758.1 | MFS transporter | - |
| JRC42_RS22335 (4546582) | 4546582..4547337 | - | 756 | WP_044707938.1 | CDP-diacylglycerol diphosphatase | - |
| JRC42_RS22340 (4547442) | 4547442..4548431 | - | 990 | WP_204619759.1 | sulfate ABC transporter substrate-binding protein | - |
| JRC42_RS22345 (4548751) | 4548751..4549713 | - | 963 | WP_001355350.1 | 6-phosphofructokinase | - |
| JRC42_RS22350 (4549895) | 4549895..4550797 | - | 903 | WP_001076754.1 | CDF family cation-efflux transporter FieF | - |
| JRC42_RS22355 (4550946) | 4550946..4551446 | - | 501 | WP_024164685.1 | cell-envelope stress modulator CpxP | - |
| JRC42_RS22360 (4551596) | 4551596..4552297 | + | 702 | WP_001033724.1 | Transcriptional regulatory protein CpxR | VF |
| JRC42_RS22365 (4552294) | 4552294..4553667 | + | 1374 | WP_000580409.1 | Sensor histidine kinase CpxA | VF |
| JRC42_RS22370 (4553772) | 4553772..4554446 | - | 675 | WP_204619760.1 | 6-hydroxyaminopurine reductase | - |
| JRC42_RS22375 (4554516) | 4554516..4555136 | - | 621 | WP_002460606.1 | Superoxide dismutase [Mn] | VF |
| JRC42_RS22380 (4555400) | 4555400..4556455 | - | 1056 | WP_000828059.1 | YiiG family protein | - |
| JRC42_RS22385 (4556609) | 4556609..4557442 | - | 834 | WP_000753602.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| JRC42_RS22390 (4557636) | 4557636..4560686 | + | 3051 | WP_204677831.1 | formate dehydrogenase-N subunit alpha | - |
| JRC42_RS22395 (4560699) | 4560699..4561601 | + | 903 | WP_204619761.1 | formate dehydrogenase subunit beta | - |
| JRC42_RS22400 (4561598) | 4561598..4562233 | + | 636 | WP_000829019.1 | formate dehydrogenase cytochrome b556 subunit | - |
| JRC42_RS22405 (4562230) | 4562230..4563159 | + | 930 | WP_000027704.1 | formate dehydrogenase accessory protein FdhE | - |
| JRC42_RS22410 (4563196) | 4563196..4563555 | - | 360 | WP_204619762.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JRC42_RS22415 (4563555) | 4563555..4563797 | - | 243 | WP_001275524.1 | CopG family transcriptional regulator | Antitoxin Detail |
| JRC42_RS22420 (4564015) | 4564015..4564233 | - | 219 | WP_001251292.1 | CopG family transcriptional regulator | - |
| JRC42_RS22425 (4564648) | 4564648..4564926 | - | 279 | WP_001296612.1 | hypothetical protein | - |
| JRC42_RS22430 (4564988) | 4564988..4565200 | - | 213 | WP_000197774.1 | hypothetical protein | - |
| JRC42_RS22435 (4565285) | 4565285..4565575 | - | 291 | WP_000356397.1 | NadS family protein | Antitoxin Detail |
| JRC42_RS22440 (4565576) | 4565576..4565887 | - | 312 | WP_000897302.1 | hypothetical protein | Toxin Detail |
| JRC42_RS22445 (4566116) | 4566116..4567024 | + | 909 | WP_204619763.1 | alpha/beta hydrolase | - |
| JRC42_RS22450 (4567088) | 4567088..4568029 | - | 942 | WP_204620272.1 | bifunctional GNAT family N-acetyltransferase/hotdog fold thioesterase | - |
| JRC42_RS22455 (4568074) | 4568074..4568511 | - | 438 | WP_000560977.1 | D-aminoacyl-tRNA deacylase | - |
| JRC42_RS22460 (4568508) | 4568508..4569380 | - | 873 | WP_204619764.1 | virulence factor BrkB family protein | - |
| JRC42_RS22465 (4569374) | 4569374..4569973 | - | 600 | WP_204619765.1 | glucose-1-phosphatase | - |
| JRC42_RS22470 (4570072) | 4570072..4570512 | - | 441 | Protein_4436 | DeoR/GlpR family DNA-binding transcription regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|