MGE detailed information
MGE type: Conjugative plasmid MGE length: 112030 bp
Accession: NZ_CP070070 Location: 1..112030 Organism: Escherichia coli strain FDAARGOS_1287 Replicon: plasmid unnamed1
Accession: NZ_CP070070 Location: 1..112030 Organism: Escherichia coli strain FDAARGOS_1287 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K17_RS00015 (1664) | 1664..2818 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| I6K17_RS00020 (2969) | 2969..3793 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| I6K17_RS00025 (3879) | 3879..5081 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| I6K17_RS00030 (5141) | 5141..5725 | + | 585 | WP_045133143.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| I6K17_RS00035 (6120) | 6120..6578 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| I6K17_RS00040 (6575) | 6575..7393 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| I6K17_RS00045 (7390) | 7390..8538 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| I6K17_RS00050 (8535) | 8535..8825 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| I6K17_RS00055 (8840) | 8840..9391 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| I6K17_RS00060 (9481) | 9481..13245 | + | 3765 | WP_045133142.1 | DUF5710 domain-containing protein | - |
| I6K17_RS00065 (13263) | 13263..13532 | + | 270 | WP_204608442.1 | F pilus assembly | - |
| I6K17_RS00070 (13599) | 13599..14621 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| I6K17_RS00075 (14618) | 14618..15400 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| I6K17_RS28030 (15439) | 15439..15570 | + | 132 | WP_285804160.1 | hypothetical protein | - |
| I6K17_RS00085 (15567) | 15567..16259 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| I6K17_RS00090 (16270) | 16270..17253 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| I6K17_RS00095 (17256) | 17256..18545 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| I6K17_RS00100 (18545) | 18545..19249 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| I6K17_RS00105 (19249) | 19249..19776 | + | 528 | WP_045133141.1 | conjugal transfer protein TraQ | - |
| I6K17_RS00110 (19827) | 19827..20231 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| I6K17_RS00115 (20295) | 20295..20483 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| I6K17_RS00120 (20467) | 20467..21267 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| I6K17_RS00125 (21357) | 21357..24401 | + | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| I6K17_RS00130 (24401) | 24401..25015 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| I6K17_RS00135 (24982) | 24982..26184 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| I6K17_RS00140 (26213) | 26213..26797 | + | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| I6K17_RS00145 (26894) | 26894..29062 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| I6K17_RS00150 (29136) | 29136..29786 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6K17_RS00155 (29858) | 29858..30067 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| I6K17_RS00160 (30459) | 30459..30635 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| I6K17_RS28035 (30700) | 30700..30795 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| I6K17_RS00165 (31294) | 31294..31545 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| I6K17_RS00170 (31617) | 31617..31769 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (31819) | 31819..31881 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (31819) | 31819..31881 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (31819) | 31819..31881 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (31819) | 31819..31881 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| I6K17_RS00175 (32061) | 32061..33269 | + | 1209 | WP_039005623.1 | IncI1-type conjugal transfer protein TrbA | - |
| I6K17_RS00180 (33288) | 33288..34358 | + | 1071 | WP_039005625.1 | IncI1-type conjugal transfer protein TrbB | - |
| I6K17_RS00185 (34351) | 34351..36642 | + | 2292 | WP_072742854.1 | F-type conjugative transfer protein TrbC | - |
| I6K17_RS27590 (37700) | 37700..38062 | + | 363 | WP_085004988.1 | CPBP family intramembrane metalloprotease | - |
| I6K17_RS00195 (38165) | 38165..39418 | + | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| I6K17_RS00200 (39418) | 39418..41607 | + | 2190 | WP_000443942.1 | peptidase domain-containing ABC transporter | - |
| I6K17_RS00205 (41657) | 41657..42229 | - | 573 | WP_000332079.1 | hypothetical protein | - |
| I6K17_RS00210 (42255) | 42255..44954 | - | 2700 | WP_039005629.1 | Protein TraI | Relaxase |
| I6K17_RS00215 (44965) | 44965..45297 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| I6K17_RS00220 (45531) | 45531..45866 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I6K17_RS00225 (45952) | 45952..46800 | - | 849 | WP_001077032.1 | DUF4942 domain-containing protein | - |
| I6K17_RS27595 (47044) | 47044..47271 | + | 228 | WP_001455299.1 | hypothetical protein | - |
| I6K17_RS00235 (47380) | 47380..47631 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| I6K17_RS00240 (47662) | 47662..47868 | - | 207 | WP_001532090.1 | hypothetical protein | VF |
| I6K17_RS00245 (47930) | 47930..48808 | - | 879 | WP_000038331.1 | Recombination-promoting nuclease RpnA | VF |
| I6K17_RS00250 (48873) | 48873..49139 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| I6K17_RS00255 (49233) | 49233..49667 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| I6K17_RS00260 (50396) | 50396..50896 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| I6K17_RS00265 (51359) | 51359..51955 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| I6K17_RS00270 (51952) | 51952..52671 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| I6K17_RS00275 (52668) | 52668..53102 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| I6K17_RS00280 (53157) | 53157..55115 | - | 1959 | WP_045133370.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K17_RS00285 (55177) | 55177..55410 | - | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| I6K17_RS00290 (55467) | 55467..55994 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| I6K17_RS00300 (56764) | 56764..56955 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| I6K17_RS00305 (56952) | 56952..57374 | - | 423 | WP_045133341.1 | DUF1380 family protein | - |
| I6K17_RS00310 (57421) | 57421..57846 | - | 426 | WP_001198908.1 | antirestriction protein | - |
| I6K17_RS00315 (58264) | 58264..59034 | - | 771 | WP_045133340.1 | hypothetical protein | - |
| I6K17_RS00320 (59079) | 59079..59546 | - | 468 | WP_223230041.1 | DUF1380 family protein | - |
| I6K17_RS00325 (59527) | 59527..59748 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| I6K17_RS00330 (59749) | 59749..60432 | - | 684 | WP_045133339.1 | DNA methylase | - |
| I6K17_RS00335 (60508) | 60508..60819 | - | 312 | WP_032143956.1 | hypothetical protein | - |
| I6K17_RS00340 (60816) | 60816..61718 | - | 903 | WP_077872020.1 | DUF1281 domain-containing protein | - |
| I6K17_RS00345 (62136) | 62136..62384 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| I6K17_RS00350 (62381) | 62381..62818 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6K17_RS00355 (62818) | 62818..64092 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| I6K17_RS00360 (64094) | 64094..64510 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| I6K17_RS00365 (64503) | 64503..65483 | - | 981 | WP_045133365.1 | plasmid segregation protein ParM | - |
| I6K17_RS00370 (65897) | 65897..66205 | - | 309 | WP_000048808.1 | hypothetical protein | - |
| I6K17_RS00375 (66292) | 66292..66936 | - | 645 | WP_001144036.1 | ParA family protein | - |
| I6K17_RS00380 (67116) | 67116..67904 | - | 789 | WP_000016498.1 | site-specific integrase | - |
| I6K17_RS00385 (67901) | 67901..68590 | - | 690 | WP_000796232.1 | hypothetical protein | - |
| I6K17_RS00390 (68583) | 68583..68852 | - | 270 | WP_001168933.1 | hypothetical protein | - |
| I6K17_RS00395 (69486) | 69486..73301 | - | 3816 | WP_240089368.1 | hypothetical protein | - |
| I6K17_RS00400 (73527) | 73527..73712 | + | 186 | Protein_78 | hypothetical protein | - |
| I6K17_RS00405 (73730) | 73730..74077 | - | 348 | WP_066019393.1 | DUF6404 family protein | - |
| I6K17_RS00410 (74767) | 74767..74913 | + | 147 | Protein_80 | lipid II-degrading bacteriocin | - |
| I6K17_RS00415 (74963) | 74963..75316 | - | 354 | WP_000864815.1 | colicin M immunity protein | - |
| I6K17_RS00420 (75489) | 75489..76276 | - | 788 | Protein_82 | site-specific integrase | - |
| I6K17_RS00425 (77099) | 77099..77308 | + | 210 | WP_000929752.1 | Major pilu subunit operon regulatory protein PapB | VF |
| I6K17_RS00430 (77497) | 77497..78252 | + | 756 | WP_024198451.1 | Chaperone protein caf1M | VF |
| I6K17_RS00435 (78380) | 78380..80938 | + | 2559 | WP_283247477.1 | F1 capsule-anchoring protein | VF |
| I6K17_RS00440 (80955) | 80955..81377 | + | 423 | WP_045133246.1 | Protein AggB | VF |
| I6K17_RS00445 (81870) | 81870..82352 | + | 483 | WP_066019395.1 | hypothetical protein | - |
| I6K17_RS00450 (82570) | 82570..83025 | + | 456 | WP_045133248.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6K17_RS00455 (83135) | 83135..83587 | - | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| I6K17_RS00460 (83916) | 83916..84173 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| I6K17_RS00465 (84173) | 84173..84763 | + | 591 | WP_045133249.1 | hypothetical protein | - |
| I6K17_RS00470 (84781) | 84781..85128 | - | 348 | WP_000142443.1 | DUF6404 family protein | - |
| I6K17_RS00475 (85257) | 85257..85592 | + | 336 | WP_045133168.1 | colicin E1 family microcin immunity protein | - |
| I6K17_RS00480 (85609) | 85609..87489 | - | 1881 | WP_032221836.1 | colicin Ia central receptor-binding domain-containing protein | - |
| I6K17_RS00485 (87768) | 87768..88706 | - | 939 | Protein_95 | protein YagA | - |
| I6K17_RS00495 (90031) | 90031..90450 | - | 420 | Protein_97 | protein YagA | - |
| I6K17_RS00500 (90804) | 90804..91406 | + | 603 | WP_045133169.1 | ProQ/FINO family protein | - |
| I6K17_RS00505 (91462) | 91462..91956 | + | 495 | WP_001350009.1 | hypothetical protein | - |
| I6K17_RS00510 (91956) | 91956..92222 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| I6K17_RS00515 (92699) | 92699..93148 | - | 450 | WP_053871401.1 | hypothetical protein | - |
| I6K17_RS00520 (93289) | 93289..94137 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| I6K17_RS00525 (94177) | 94177..94455 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| I6K17_RS00530 (94455) | 94455..94724 | - | 270 | WP_032181987.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| I6K17_RS00535 (94779) | 94779..94937 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| I6K17_RS00540 (95633) | 95633..96664 | - | 1032 | WP_044706701.1 | plasmid replication initiator RepA | - |
| I6K17_RS00545 (97670) | 97670..97900 | + | 231 | WP_228772074.1 | ash family protein | - |
| I6K17_RS00550 (97818) | 97818..98105 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| I6K17_RS00555 (98547) | 98547..99080 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| I6K17_RS00560 (99333) | 99333..100016 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| I6K17_RS00565 (100188) | 100188..100562 | + | 375 | WP_001690634.1 | PilI type IV pilus biogenesis protein | - |
| I6K17_RS00570 (101534) | 101534..102601 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| I6K17_RS00575 (102601) | 102601..103038 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| I6K17_RS00580 (103052) | 103052..104734 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| I6K17_RS00585 (104727) | 104727..106022 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| I6K17_RS00590 (106009) | 106009..106461 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| I6K17_RS00595 (106472) | 106472..108025 | + | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| I6K17_RS00600 (108038) | 108038..109123 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| I6K17_RS00605 (109140) | 109140..109754 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| I6K17_RS00610 (109764) | 109764..110324 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| I6K17_RS00615 (110309) | 110309..110965 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|