MGE detailed information
MGE type: Conjugative plasmid MGE length: 94581 bp
Accession: NZ_CP069958 Location: 1..94581 Organism: Escherichia coli strain FDAARGOS_1279 Replicon: plasmid unnamed1
Accession: NZ_CP069958 Location: 1..94581 Organism: Escherichia coli strain FDAARGOS_1279 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K09_RS24370 (1492) | 1492..2862 | - | 1371 | WP_001393542.1 | hypothetical protein | VF |
| I6K09_RS24375 (2862) | 2862..3518 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| I6K09_RS24380 (3503) | 3503..4063 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| I6K09_RS24385 (4073) | 4073..4687 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| I6K09_RS24390 (4705) | 4705..5802 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| I6K09_RS24395 (5815) | 5815..7368 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| I6K09_RS24400 (7379) | 7379..7831 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| I6K09_RS24405 (7818) | 7818..9113 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| I6K09_RS24410 (9106) | 9106..10788 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| I6K09_RS24415 (10802) | 10802..11239 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| I6K09_RS24420 (11239) | 11239..12306 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| I6K09_RS24425 (12980) | 12980..13432 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| I6K09_RS24430 (13475) | 13475..13729 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| I6K09_RS24435 (13997) | 13997..14563 | - | 567 | WP_000776428.1 | protein TraD | - |
| I6K09_RS24440 (14577) | 14577..15260 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| I6K09_RS24445 (15514) | 15514..16047 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| I6K09_RS24450 (16489) | 16489..16776 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| I6K09_RS24455 (16694) | 16694..16924 | - | 231 | WP_228772074.1 | ash family protein | - |
| I6K09_RS24460 (17930) | 17930..18961 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| I6K09_RS24465 (19656) | 19656..19814 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| I6K09_RS24470 (19869) | 19869..20138 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| I6K09_RS24475 (20138) | 20138..20416 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| I6K09_RS24480 (20456) | 20456..21304 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| I6K09_RS24485 (21541) | 21541..21666 | - | 126 | Protein_24 | MerR family transcriptional regulator | - |
| I6K09_RS24490 (21661) | 21661..22842 | + | 1182 | Protein_25 | transposase | - |
| I6K09_RS24495 (22907) | 22907..23611 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6K09_RS24500 (23733) | 23733..24638 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| I6K09_RS24505 (24635) | 24635..25873 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| I6K09_RS24510 (25873) | 25873..26457 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| I6K09_RS24515 (26950) | 26950..27714 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| I6K09_RS24520 (27864) | 27864..28568 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| I6K09_RS24525 (29031) | 29031..29297 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| I6K09_RS24530 (29297) | 29297..29791 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| I6K09_RS24535 (29847) | 29847..30449 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| I6K09_RS24540 (30803) | 30803..32149 | + | 1347 | WP_001132019.1 | protein YagA | - |
| I6K09_RS24545 (32428) | 32428..34308 | + | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| I6K09_RS24550 (34326) | 34326..34673 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| I6K09_RS24555 (34792) | 34792..35139 | + | 348 | WP_000142424.1 | DUF6404 family protein | - |
| I6K09_RS24560 (35157) | 35157..35747 | - | 591 | WP_000194555.1 | hypothetical protein | - |
| I6K09_RS24565 (35744) | 35744..36004 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| I6K09_RS24570 (36573) | 36573..36986 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| I6K09_RS24575 (36988) | 36988..37773 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| I6K09_RS24580 (38357) | 38357..38989 | + | 633 | WP_000312331.1 | ParA family protein | - |
| I6K09_RS24585 (38989) | 38989..39363 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| I6K09_RS24590 (39602) | 39602..40576 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| I6K09_RS24595 (40580) | 40580..40972 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| I6K09_RS24600 (41653) | 41653..42555 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| I6K09_RS24605 (42559) | 42559..42864 | + | 306 | WP_001348080.1 | hypothetical protein | - |
| I6K09_RS24610 (42940) | 42940..43623 | + | 684 | WP_000086147.1 | DNA methylase | - |
| I6K09_RS24615 (43624) | 43624..43845 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| I6K09_RS24620 (43859) | 43859..44293 | + | 435 | WP_044502554.1 | DUF1380 family protein | - |
| I6K09_RS24625 (44339) | 44339..45115 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| I6K09_RS24630 (45533) | 45533..45958 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| I6K09_RS24635 (46005) | 46005..46427 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| I6K09_RS24640 (46424) | 46424..46615 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| I6K09_RS24645 (46686) | 46686..47000 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| I6K09_RS24650 (47384) | 47384..47911 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| I6K09_RS24655 (47969) | 47969..48202 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| I6K09_RS24660 (48261) | 48261..50219 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K09_RS24665 (50274) | 50274..50708 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| I6K09_RS24670 (50705) | 50705..51424 | + | 720 | WP_021580015.1 | plasmid SOS inhibition protein A | - |
| I6K09_RS24675 (51421) | 51421..52017 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| I6K09_RS24680 (52479) | 52479..52979 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| I6K09_RS24685 (53708) | 53708..54142 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| I6K09_RS24690 (54236) | 54236..54502 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| I6K09_RS24695 (54567) | 54567..55505 | + | 939 | WP_000078704.1 | hypothetical protein | VF |
| I6K09_RS24700 (55528) | 55528..55725 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| I6K09_RS24705 (55756) | 55756..56007 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| I6K09_RS24715 (56587) | 56587..57435 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| I6K09_RS24720 (57521) | 57521..57856 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I6K09_RS24725 (58089) | 58089..58421 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| I6K09_RS24730 (58432) | 58432..61131 | + | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| I6K09_RS24735 (61168) | 61168..63459 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| I6K09_RS24740 (63452) | 63452..64522 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| I6K09_RS24745 (64541) | 64541..65749 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (65929) | 65929..65986 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (65929) | 65929..65986 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (65929) | 65929..65986 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (65929) | 65929..65986 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| I6K09_RS24750 (66041) | 66041..66193 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| I6K09_RS26155 (67017) | 67017..67112 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| I6K09_RS24760 (67177) | 67177..67353 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| I6K09_RS24765 (67745) | 67745..67954 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| I6K09_RS24770 (68026) | 68026..68688 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6K09_RS24775 (68753) | 68753..70750 | - | 1998 | Protein_81 | DotA/TraY family protein | - |
| I6K09_RS24785 (72058) | 72058..72228 | - | 171 | WP_204690273.1 | hypothetical protein | - |
| I6K09_RS24790 (72325) | 72325..72909 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| I6K09_RS24795 (72938) | 72938..74140 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| I6K09_RS24800 (74107) | 74107..74721 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| I6K09_RS24805 (74721) | 74721..77765 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| I6K09_RS24810 (77855) | 77855..78655 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| I6K09_RS24815 (78639) | 78639..78827 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| I6K09_RS24820 (78891) | 78891..79295 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| I6K09_RS24825 (79346) | 79346..79873 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| I6K09_RS24830 (79873) | 79873..80577 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| I6K09_RS24835 (80577) | 80577..81866 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| I6K09_RS24840 (81869) | 81869..82852 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| I6K09_RS24845 (82863) | 82863..83555 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| I6K09_RS24850 (83552) | 83552..83899 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| I6K09_RS24855 (83917) | 83917..87684 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| I6K09_RS24860 (87774) | 87774..88325 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| I6K09_RS24865 (88340) | 88340..88630 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| I6K09_RS24870 (88627) | 88627..89775 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| I6K09_RS24875 (89772) | 89772..90590 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| I6K09_RS24880 (90587) | 90587..91045 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| I6K09_RS24885 (91440) | 91440..92024 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| I6K09_RS24890 (92084) | 92084..93286 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| I6K09_RS24895 (93371) | 93371..94195 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|