MGE detailed information
MGE type: Genomic_island MGE length: 44517 bp
Accession: NZ_CP069709 Location: 4104442..4148958 Organism: Escherichia coli strain EA7 Replicon: chromosome
Accession: NZ_CP069709 Location: 4104442..4148958 Organism: Escherichia coli strain EA7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ43_RS20360 () | 4101162..4101737 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| JSQ43_RS20370 () | 4102096..4103286 | + | 1191 | WP_001218741.1 | tyrosine-type recombinase/integrase | - |
| JSQ43_RS20375 () | 4103399..4104367 | - | 969 | WP_077877260.1 | IS5 family transposase | - |
| JSQ43_RS20380 () | 4104442..4104828 | - | 387 | Protein_3891 | IS5 family transposase ISPrst3 | Transposase |
| JSQ43_RS20385 () | 4104875..4105642 | - | 768 | WP_040062538.1 | hypothetical protein | - |
| JSQ43_RS20390 () | 4105708..4106676 | + | 969 | WP_077877260.1 | IS5 family transposase IS903 | Transposase |
| JSQ43_RS20395 () | 4107480..4107587 | + | 108 | WP_077877257.1 | hypothetical protein | - |
| JSQ43_RS20400 () | 4107801..4108502 | - | 702 | WP_040064658.1 | DUF4396 domain-containing protein | - |
| JSQ43_RS20405 () | 4108602..4108769 | + | 168 | WP_197092482.1 | hypothetical protein | - |
| JSQ43_RS20410 () | 4108811..4109779 | - | 969 | WP_077877260.1 | IS5 family transposase IS903 | Transposase |
| JSQ43_RS20415 () | 4110198..4111265 | + | 1068 | WP_029396441.1 | hypothetical protein | - |
| JSQ43_RS20420 () | 4111294..4111991 | + | 698 | Protein_3899 | IS1 family transposase IS1R | Transposase |
| JSQ43_RS20425 () | 4112524..4112721 | - | 198 | WP_001238006.1 | hypothetical protein | - |
| JSQ43_RS20430 () | 4112861..4113127 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| JSQ43_RS20435 () | 4113124..4113777 | - | 654 | Protein_3902 | cobalamin adenosyltransferase | - |
| JSQ43_RS20440 () | 4113839..4114819 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| JSQ43_RS20445 () | 4114968..4115327 | - | 360 | Protein_3904 | WYL domain-containing protein | - |
| JSQ43_RS20450 () | 4115747..4116484 | - | 738 | WP_001389182.1 | porin family protein | - |
| JSQ43_RS20455 () | 4116851..4117192 | + | 342 | Protein_3906 | IS3 family transposase ISEc31 | Transposase |
| JSQ43_RS20460 () | 4117865..4119373 | + | 1509 | WP_032347722.1 | group II intron reverse transcriptase/maturase | - |
| JSQ43_RS20465 () | 4119454..4119942 | + | 489 | Protein_3908 | IS3 family transposase ISEc31 | Transposase |
| JSQ43_RS20470 () | 4120121..4120744 | - | 624 | WP_042850840.1 | hypothetical protein | - |
| JSQ43_RS20475 () | 4120833..4121333 | - | 501 | WP_032216520.1 | hypothetical protein | - |
| JSQ43_RS20480 () | 4121601..4121831 | - | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| JSQ43_RS20485 () | 4121900..4122460 | - | 561 | WP_032216519.1 | hypothetical protein | - |
| JSQ43_RS20490 () | 4122718..4123284 | - | 567 | WP_001126818.1 | inovirus-type Gp2 protein | - |
| JSQ43_RS20495 () | 4124824..4126428 | - | 1605 | WP_001083419.1 | DUF3987 domain-containing protein | - |
| JSQ43_RS20500 () | 4126755..4127486 | - | 732 | WP_063073420.1 | inovirus Gp2 family protein | - |
| JSQ43_RS20505 () | 4129152..4130282 | - | 1131 | WP_077462115.1 | hypothetical protein | - |
| JSQ43_RS20510 () | 4130467..4131351 | + | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| JSQ43_RS20515 () | 4131554..4132234 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| JSQ43_RS20520 () | 4132382..4133059 | + | 678 | WP_063100886.1 | hypothetical protein | - |
| JSQ43_RS20525 () | 4133065..4133298 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| JSQ43_RS20530 () | 4133388..4134206 | + | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| JSQ43_RS20535 () | 4134288..4134767 | + | 480 | WP_000844100.1 | antirestriction protein | - |
| JSQ43_RS20540 () | 4134783..4135259 | + | 477 | WP_001366855.1 | RadC family protein | - |
| JSQ43_RS20545 () | 4135322..4135543 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| JSQ43_RS20550 () | 4135623..4135997 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JSQ43_RS20555 () | 4136044..4136421 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| JSQ43_RS20560 () | 4136418..4136906 | + | 489 | WP_000761676.1 | hypothetical protein | - |
| JSQ43_RS20565 () | 4136918..4137115 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| JSQ43_RS20570 () | 4137200..4138066 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| JSQ43_RS20575 () | 4138138..4138401 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JSQ43_RS20580 () | 4138398..4138724 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JSQ43_RS20585 () | 4139607..4141145 | + | 1539 | WP_024218489.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JSQ43_RS20590 () | 4141511..4142845 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JSQ43_RS20595 () | 4142925..4145072 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JSQ43_RS20600 () | 4145131..4146588 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JSQ43_RS20605 () | 4146825..4148342 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JSQ43_RS20610 () | 4148461..4148634 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JSQ43_RS20615 () | 4148662..4148958 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JSQ43_RS20620 () | 4149185..4149457 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| JSQ43_RS20625 () | 4149469..4149699 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| JSQ43_RS20630 () | 4149880..4151511 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JSQ43_RS20635 () | 4151508..4152227 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|