MGE detailed information
MGE type: Conjugative plasmid MGE length: 135712 bp
Accession: NZ_CP069703 Location: 1..135712 Organism: Escherichia coli strain ECY44 Replicon: plasmid pECY44-2
Accession: NZ_CP069703 Location: 1..135712 Organism: Escherichia coli strain ECY44 Replicon: plasmid pECY44-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR341_RS01265 () | 46..1068 | + | 1023 | WP_072645566.1 | replication initiation protein | - |
| JR341_RS01270 () | 1763..1930 | + | 168 | WP_072645565.1 | hypothetical protein | - |
| JR341_RS01275 () | 2017..2268 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JR341_RS01280 () | 2265..2552 | + | 288 | WP_001523468.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR341_RS01285 () | 2562..3107 | + | 546 | WP_170852536.1 | hypothetical protein | - |
| JR341_RS01290 () | 3565..4533 | - | 969 | WP_000654804.1 | IS5-like element IS903B family transposase | - |
| JR341_RS01295 () | 4562..4876 | - | 315 | Protein_6 | transposase | - |
| JR341_RS01300 () | 4941..5645 | + | 705 | WP_204088838.1 | IS6 family transposase | - |
| JR341_RS01305 () | 5703..5909 | + | 207 | WP_063151275.1 | hypothetical protein | - |
| JR341_RS01310 () | 6055..6363 | - | 309 | Protein_9 | IS5/IS1182 family transposase | - |
| JR341_RS01315 () | 6705..7532 | + | 828 | WP_012637488.1 | phosphonate ABC transporter ATP-binding protein | - |
| JR341_RS01320 () | 7529..8392 | + | 864 | WP_004152695.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| JR341_RS01325 () | 8401..9228 | + | 828 | WP_004152694.1 | phosphonate ABC transporter, permease protein PhnE | - |
| JR341_RS01330 () | 9237..10247 | + | 1011 | WP_004152693.1 | phosphonate dehydrogenase PtxD | - |
| JR341_RS01335 () | 10241..11110 | + | 870 | WP_004152692.1 | LysR family transcriptional regulator | - |
| JR341_RS01340 () | 11218..11737 | + | 520 | Protein_15 | IS5-like element ISPst7 family transposase | - |
| JR341_RS01345 () | 12765..13352 | + | 588 | WP_077250660.1 | serine acetyltransferase | - |
| JR341_RS01350 () | 13632..14219 | - | 588 | WP_072645656.1 | proQ/FINO family protein | - |
| JR341_RS01355 () | 15193..15890 | - | 698 | Protein_18 | IS1 family transposase | - |
| JR341_RS01360 () | 16566..17960 | + | 1395 | WP_001091891.1 | MHS family MFS transporter | - |
| JR341_RS01365 () | 18065..19096 | + | 1032 | WP_000194408.1 | LacI family transcriptional regulator | - |
| JR341_RS01370 () | 19071..20090 | + | 1020 | WP_000671481.1 | nucleoside hydrolase | - |
| JR341_RS01375 () | 20154..20867 | + | 714 | WP_072645539.1 | MgtC/SapB family protein | - |
| JR341_RS01380 () | 21068..21519 | - | 452 | Protein_23 | transposase | - |
| JR341_RS01385 () | 21965..22243 | + | 279 | WP_000849708.1 | DUF5339 domain-containing protein | - |
| JR341_RS01390 () | 22582..23613 | - | 1032 | WP_094320497.1 | isoaspartyl peptidase/L-asparaginase | - |
| JR341_RS01395 () | 23783..24751 | - | 969 | WP_072223036.1 | IS5-like element IS903B family transposase | - |
| JR341_RS01400 () | 25085..26012 | - | 928 | Protein_27 | group II intron reverse transcriptase/maturase | - |
| JR341_RS01405 () | 26477..26605 | + | 129 | Protein_28 | transposase | - |
| JR341_RS01410 () | 26658..28019 | - | 1362 | WP_001595909.1 | C4-dicarboxylate transporter DcuC | - |
| JR341_RS01415 () | 28016..29272 | - | 1257 | WP_072645540.1 | peptidase T | - |
| JR341_RS01420 () | 30147..31547 | + | 1401 | WP_000086499.1 | aspartate ammonia-lyase | - |
| JR341_RS01425 () | 31703..33037 | + | 1335 | WP_000351505.1 | anaerobic C4-dicarboxylate transporter | - |
| JR341_RS01430 () | 33525..34571 | + | 1047 | WP_072645005.1 | L-asparaginase 2 | - |
| JR341_RS01435 () | 35084..35809 | - | 726 | WP_001067028.1 | two-component system response regulator DcuR | - |
| JR341_RS01440 () | 36788..37444 | - | 657 | WP_072645006.1 | FadR family transcriptional regulator | - |
| JR341_RS01445 () | 37610..38122 | + | 513 | Protein_36 | C4-dicarboxylate ABC transporter | - |
| JR341_RS01450 () | 38180..39457 | - | 1278 | WP_072645008.1 | ISL3 family transposase | - |
| JR341_RS01455 () | 39470..40504 | - | 1035 | WP_072645009.1 | permease | - |
| JR341_RS01460 () | 40616..40930 | + | 315 | WP_000349485.1 | helix-turn-helix domain-containing protein | - |
| JR341_RS01465 () | 41189..41962 | - | 774 | WP_072645010.1 | YaiO family outer membrane beta-barrel protein | - |
| JR341_RS01470 () | 41964..42545 | - | 582 | WP_072645023.1 | acetyltransferase | - |
| JR341_RS01475 () | 42523..43719 | - | 1197 | WP_072645011.1 | glycosyltransferase family 2 protein | - |
| JR341_RS01480 () | 43733..44389 | - | 657 | WP_077250687.1 | PIG-L family deacetylase | - |
| JR341_RS01485 () | 45676..45897 | + | 222 | WP_077250686.1 | hypothetical protein | - |
| JR341_RS01490 () | 46018..46758 | + | 741 | WP_072645014.1 | tyrosine-type recombinase/integrase | - |
| JR341_RS01495 () | 47043..48020 | - | 978 | WP_072645015.1 | RepB family plasmid replication initiator protein | - |
| JR341_RS01500 () | 48909..49322 | + | 414 | WP_072645017.1 | hypothetical protein | - |
| JR341_RS01505 () | 49359..50534 | - | 1176 | WP_204088839.1 | transposase | - |
| JR341_RS01510 () | 50660..51439 | + | 780 | WP_072645019.1 | site-specific integrase | - |
| JR341_RS01515 () | 51619..52263 | + | 645 | WP_001144036.1 | ParA family protein | - |
| JR341_RS01520 () | 52350..52658 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| JR341_RS01525 () | 53066..54046 | + | 981 | WP_072645020.1 | plasmid segregation protein ParM | - |
| JR341_RS01530 () | 54039..54455 | + | 417 | WP_072645021.1 | plasmid partitioning/stability family protein | - |
| JR341_RS01535 () | 54457..55731 | - | 1275 | WP_072645022.1 | Y-family DNA polymerase | - |
| JR341_RS01540 () | 55731..56168 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JR341_RS01545 () | 56165..56413 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JR341_RS01550 () | 56831..57511 | + | 681 | Protein_57 | DUF1281 domain-containing protein | - |
| JR341_RS01555 () | 57623..58798 | + | 1176 | WP_072645018.1 | transposase | - |
| JR341_RS01560 () | 58839..59057 | + | 219 | Protein_59 | hypothetical protein | - |
| JR341_RS01565 () | 59073..59383 | + | 311 | Protein_60 | hypothetical protein | - |
| JR341_RS01570 () | 59459..60142 | + | 684 | WP_072645820.1 | DNA methylase | - |
| JR341_RS01575 () | 60143..60364 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| JR341_RS01580 () | 60377..60796 | + | 420 | WP_072645426.1 | DUF1380 family protein | - |
| JR341_RS01585 () | 60847..61623 | + | 777 | WP_175154176.1 | hypothetical protein | - |
| JR341_RS01590 () | 62163..62465 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| JR341_RS01595 () | 62512..62934 | + | 423 | WP_000271704.1 | DUF1380 family protein | - |
| JR341_RS01600 () | 62931..63122 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| JR341_RS01605 () | 63455..63523 | - | 69 | Protein_68 | pilus protein | - |
| JR341_RS01610 () | 63570..63771 | - | 202 | Protein_69 | hypothetical protein | - |
| JR341_RS01615 () | 63892..64419 | + | 528 | WP_072645259.1 | single-stranded DNA-binding protein | - |
| JR341_RS01620 () | 64477..64710 | + | 234 | WP_021564200.1 | DUF905 family protein | - |
| JR341_RS01625 () | 64774..66732 | + | 1959 | WP_072645260.1 | ParB/RepB/Spo0J family partition protein | - |
| JR341_RS01630 () | 66787..67221 | + | 435 | WP_072645261.1 | conjugation system SOS inhibitor PsiB | - |
| JR341_RS01635 () | 67218..67937 | + | 720 | WP_204088840.1 | plasmid SOS inhibition protein A | - |
| - () | 67949..68157 | + | 209 | NuclAT_0 | - | - |
| - () | 67949..68157 | + | 209 | NuclAT_0 | - | - |
| - () | 67949..68157 | + | 209 | NuclAT_0 | - | - |
| - () | 67949..68157 | + | 209 | NuclAT_0 | - | - |
| JR341_RS01640 () | 68203..68340 | + | 138 | Protein_75 | Hok/Gef family protein | - |
| JR341_RS01645 () | 68389..69615 | - | 1227 | WP_072645286.1 | transposase | - |
| JR341_RS01650 () | 69674..70078 | + | 405 | WP_001175008.1 | IS200/IS605 family transposase | - |
| JR341_RS01655 () | 70158..70355 | + | 198 | Protein_78 | hypothetical protein | - |
| JR341_RS01660 () | 70817..71317 | + | 501 | WP_072651009.1 | antirestriction protein ArdA | - |
| JR341_RS01665 () | 72045..72479 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| JR341_RS01670 () | 72573..72839 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| JR341_RS01675 () | 72904..73833 | + | 930 | WP_072645264.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JR341_RS01680 () | 73895..74077 | + | 183 | WP_019842523.1 | hypothetical protein | - |
| JR341_RS01685 () | 74108..74359 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| JR341_RS01690 () | 74940..75788 | + | 849 | WP_072645265.1 | DUF4942 domain-containing protein | - |
| JR341_RS01695 () | 75875..76210 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JR341_RS01700 () | 76443..76775 | + | 333 | WP_072645266.1 | nikA protein | - |
| JR341_RS01705 () | 76786..79485 | + | 2700 | WP_072645267.1 | IncI1-type relaxase NikB | - |
| JR341_RS01710 () | 79643..80875 | - | 1233 | WP_001045917.1 | MFS transporter | - |
| JR341_RS01715 () | 80891..81268 | - | 378 | WP_072645268.1 | RidA family protein | - |
| JR341_RS01720 () | 81290..82249 | - | 960 | WP_016231888.1 | sugar phosphate isomerase/epimerase | - |
| JR341_RS01725 () | 82435..83097 | + | 663 | WP_000835776.1 | PAS domain-containing protein | - |
| JR341_RS01730 () | 83239..85530 | - | 2292 | WP_001289263.1 | hypothetical protein | - |
| JR341_RS01735 () | 85523..86593 | - | 1071 | WP_072645269.1 | IncI1-type conjugal transfer protein TrbB | - |
| JR341_RS01740 () | 86612..87820 | - | 1209 | WP_072645270.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 88000..88062 | - | 63 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88000..88062 | - | 63 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88000..88062 | - | 63 | NuclAT_1 | - | Antitoxin Detail |
| - () | 88000..88062 | - | 63 | NuclAT_1 | - | Antitoxin Detail |
| JR341_RS01745 () | 88112..88264 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| JR341_RS01750 () | 88336..88587 | - | 252 | WP_021513960.1 | hypothetical protein | - |
| JR341_RS01755 () | 88803..89972 | + | 1170 | WP_072645271.1 | transposase | - |
| - () | 90312..90363 | - | 52 | NuclAT_2 | - | - |
| - () | 90312..90363 | - | 52 | NuclAT_2 | - | - |
| - () | 90312..90363 | - | 52 | NuclAT_2 | - | - |
| - () | 90312..90363 | - | 52 | NuclAT_2 | - | - |
| JR341_RS01760 () | 91203..91379 | - | 177 | WP_001054905.1 | hypothetical protein | - |
| JR341_RS01765 () | 91588..91797 | - | 210 | WP_001140544.1 | hemolysin expression modulator Hha | - |
| JR341_RS01770 () | 91895..92557 | - | 663 | WP_072645273.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JR341_RS01775 () | 92627..94795 | - | 2169 | WP_077250677.1 | DotA/TraY family protein | - |
| JR341_RS01780 () | 94892..95476 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| JR341_RS01785 () | 95505..96707 | - | 1203 | WP_072645275.1 | IncI1-type conjugal transfer protein TraW | - |
| JR341_RS01790 () | 96674..97288 | - | 615 | WP_072645276.1 | IncI1-type conjugal transfer protein TraV | - |
| JR341_RS01795 () | 97288..100332 | - | 3045 | WP_072645277.1 | IncI1-type conjugal transfer protein TraU | - |
| JR341_RS01800 () | 100422..101222 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| JR341_RS01805 () | 101206..101394 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| JR341_RS01810 () | 101458..101862 | - | 405 | WP_000086954.1 | IncI1-type conjugal transfer protein TraR | - |
| JR341_RS01815 () | 101912..102439 | - | 528 | WP_072645278.1 | conjugal transfer protein TraQ | - |
| JR341_RS01820 () | 102439..103143 | - | 705 | WP_072645279.1 | IncI1-type conjugal transfer protein TraP | - |
| JR341_RS01825 () | 103143..104432 | - | 1290 | WP_072645280.1 | conjugal transfer protein TraO | - |
| JR341_RS01830 () | 104435..105418 | - | 984 | WP_001191879.1 | IncI1-type conjugal transfer protein TraN | - |
| JR341_RS01835 () | 105429..106121 | - | 693 | WP_000138549.1 | DotI/IcmL family type IV secretion protein | - |
| JR341_RS01840 () | 106118..106465 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| JR341_RS01845 () | 106483..110259 | - | 3777 | WP_204088836.1 | DNA primase | - |
| JR341_RS01850 () | 110349..110900 | - | 552 | WP_000014581.1 | phospholipase D family protein | - |
| JR341_RS01855 () | 110915..111205 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| JR341_RS01860 () | 111202..112350 | - | 1149 | WP_001024975.1 | plasmid transfer ATPase TraJ | - |
| JR341_RS01865 () | 112347..113165 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| JR341_RS01870 () | 113162..113620 | - | 459 | WP_072645282.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| JR341_RS01875 () | 114041..115249 | - | 1209 | WP_072645283.1 | transposase | - |
| JR341_RS01880 () | 115375..116577 | - | 1203 | WP_072645284.1 | conjugal transfer protein TraF | - |
| JR341_RS01885 () | 116663..117487 | - | 825 | WP_204088837.1 | conjugal transfer protein TraE | - |
| JR341_RS01890 () | 117638..118792 | - | 1155 | WP_072645288.1 | integrase | - |
| JR341_RS01895 () | 118791..119144 | + | 354 | WP_112029616.1 | shufflon protein D' | - |
| JR341_RS01900 () | 119429..120742 | - | 1314 | WP_182920554.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| JR341_RS01905 () | 120730..121386 | - | 657 | WP_072645202.1 | prepilin peptidase | - |
| JR341_RS01910 () | 121371..121931 | - | 561 | WP_072645203.1 | lytic transglycosylase domain-containing protein | - |
| JR341_RS01915 () | 121941..122555 | - | 615 | WP_072645204.1 | pilus assembly protein PilX | - |
| JR341_RS01920 () | 122572..123657 | - | 1086 | WP_063103211.1 | type II secretion system F family protein | - |
| JR341_RS01925 () | 123670..125223 | - | 1554 | WP_072645205.1 | Flp pilus assembly complex ATPase component TadA | - |
| JR341_RS01930 () | 125234..125686 | - | 453 | WP_001247333.1 | type IV pilus biogenesis protein PilP | - |
| JR341_RS01935 () | 125673..126968 | - | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| JR341_RS01940 () | 126961..128643 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| JR341_RS01945 () | 128657..129094 | - | 438 | WP_000539811.1 | type IV pilus biogenesis protein PilM | - |
| JR341_RS01950 () | 129094..130161 | - | 1068 | WP_072645206.1 | type IV pilus biogenesis lipoprotein PilL | - |
| JR341_RS01955 () | 130807..131289 | - | 483 | Protein_138 | pili assembly chaperone | - |
| JR341_RS01960 () | 131332..131586 | - | 255 | WP_077250675.1 | PilI type IV pilus biogenesis protein | - |
| JR341_RS01965 () | 131854..132420 | - | 567 | WP_072645570.1 | conjugal transfer protein TraD | - |
| JR341_RS01970 () | 132434..133117 | - | 684 | WP_072645569.1 | conjugal transfer protein TraC | - |
| JR341_RS01975 () | 133371..133904 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| JR341_RS01980 () | 134550..134797 | - | 248 | Protein_143 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|