NZ_CP0696924445817..4634211

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 188395 bp
Accession: NZ_CP069692        Location: 4445817..4634211         Organism: Escherichia coli H20 strain MIN6       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JSU10_RS21405 (4440998) 4440998..4442230 + 1233 WP_001389184.1 MFS transporter -
JSU10_RS21410 (4442495) 4442495..4443220 - 726 Protein_4244 transposase -
JSU10_RS21415 (4443251) 4443251..4443601 - 351 WP_000624710.1 IS66 family insertion sequence element accessory protein TnpB -
JSU10_RS21420 (4443598) 4443598..4444017 - 420 WP_000422706.1 transposase -
JSU10_RS21430 (4445761) 4445761..4446717 + 957 WP_000301136.1 NotI family restriction endonuclease -
JSU10_RS21435 (4446698) 4446698..4447627 - 930 WP_001328257.1 DNA (cytosine-5-)-methyltransferase -
JSU10_RS25470 (4447819) 4447819..4447984 - 166 Protein_4250 integrase -
JSU10_RS25475 (4448067) 4448067..4448117 + 51 Protein_4251 IS3 family transposase ISRaq1 Transposase
JSU10_RS21450 (4448145) 4448145..4448441 + 297 Protein_4252 transposase -
JSU10_RS21455 (4448588) 4448588..4449778 - 1191 Protein_4253 IS3 family transposase -
JSU10_RS21460 (4449993) 4449993..4451540 - 1548 WP_001294844.1 hypothetical protein -
JSU10_RS21465 (4451540) 4451540..4456498 - 4959 WP_000877066.1 AAA domain-containing protein -
JSU10_RS21470 (4456706) 4456706..4456861 + 156 Protein_4256 integrase -
JSU10_RS21475 (4456898) 4456898..4457512 - 615 Protein_4257 IS3 family transposase ISEc48 Transposase
JSU10_RS21480 (4457700) 4457700..4458029 + 330 WP_000042910.1 IS66 family transposase ISEc49 Transposase
JSU10_RS21485 (4458016) 4458016..4458408 + 393 WP_000950652.1 IS66 family transposase ISEc49 Transposase
JSU10_RS21490 (4458415) 4458415..4459289 + 875 Protein_4260 IS66 family transposase ISEc49 Transposase
JSU10_RS21495 (4459285) 4459285..4460094 - 810 Protein_4261 hypothetical protein VF
JSU10_RS21500 (4460058) 4460058..4461737 - 1680 Protein_4262 hypothetical protein VF
JSU10_RS21505 (4461730) 4461730..4461900 - 171 Protein_4263 hypothetical protein -
JSU10_RS21510 (4461989) 4461989..4462489 - 501 WP_001167446.1 hypothetical protein -
JSU10_RS21515 (4462757) 4462757..4462987 - 231 WP_001389194.1 AlpA family transcriptional regulator -
JSU10_RS21520 (4463056) 4463056..4463616 - 561 WP_000991581.1 hypothetical protein -
JSU10_RS21525 (4463874) 4463874..4464440 - 567 WP_001126801.1 inovirus-type Gp2 protein -
JSU10_RS21530 (4466018) 4466018..4466722 + 705 WP_001389195.1 toll/interleukin-1 receptor domain-containing protein -
JSU10_RS21535 (4467146) 4467146..4467877 - 732 WP_001075482.1 inovirus Gp2 family protein -
JSU10_RS21540 (4469396) 4469396..4470526 - 1131 WP_000147745.1 hypothetical protein -
JSU10_RS21545 (4470711) 4470711..4471541 + 831 Protein_4271 YfjP family GTPase -
JSU10_RS21550 (4471646) 4471646..4472626 - 981 WP_000399648.1 IS110 family transposase IS621 Transposase
JSU10_RS21555 (4473077) 4473077..4473757 + 681 WP_001282919.1 WYL domain-containing protein -
JSU10_RS21560 (4473905) 4473905..4474582 + 678 WP_001097302.1 hypothetical protein -
JSU10_RS21565 (4474588) 4474588..4474821 + 234 WP_001278287.1 DUF905 family protein -
JSU10_RS21570 (4474911) 4474911..4475729 + 819 WP_001175148.1 DUF932 domain-containing protein -
JSU10_RS21575 (4475811) 4475811..4476290 + 480 WP_000844100.1 antirestriction protein -
JSU10_RS21580 (4476306) 4476306..4476782 + 477 WP_001366855.1 RadC family protein -
JSU10_RS21585 (4476845) 4476845..4477066 + 222 WP_000692309.1 DUF987 domain-containing protein -
JSU10_RS21590 (4477146) 4477146..4477520 + 375 WP_001285415.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
JSU10_RS21595 (4477567) 4477567..4477944 + 378 WP_000854735.1 TA system toxin CbtA family protein Toxin Detail
JSU10_RS21600 (4477941) 4477941..4478429 + 489 WP_000761676.1 DUF5983 family protein -
JSU10_RS21605 (4478441) 4478441..4478638 + 198 WP_000839291.1 DUF957 domain-containing protein -
JSU10_RS21610 (4478723) 4478723..4479589 + 867 WP_001280433.1 DUF4942 domain-containing protein -
JSU10_RS21615 (4479661) 4479661..4479924 + 264 WP_001143297.1 type II toxin-antitoxin system ParD family antitoxin -
JSU10_RS21620 (4479921) 4479921..4480247 + 327 WP_000779483.1 type II toxin-antitoxin system RelE/ParE family toxin -
JSU10_RS21625 (4481130) 4481130..4482668 + 1539 WP_001187170.1 lysine decarboxylation/transport transcriptional activator CadC -
JSU10_RS21630 (4483034) 4483034..4484368 + 1335 WP_000092909.1 cadaverine/lysine antiporter -
JSU10_RS21635 (4484448) 4484448..4486595 + 2148 WP_001100642.1 lysine decarboxylase CadA -
JSU10_RS21640 (4486654) 4486654..4488111 + 1458 WP_000856829.1 dipeptide/tripeptide permease DtpC -
JSU10_RS21645 (4488348) 4488348..4489865 + 1518 WP_001295087.1 lysine--tRNA ligase -
JSU10_RS21650 (4489984) 4489984..4490157 - 174 WP_001173343.1 type V toxin-antitoxin system toxin GhoT Toxin Detail
JSU10_RS21655 (4490185) 4490185..4490481 - 297 WP_071988580.1 type V toxin-antitoxin system endoribonuclease antitoxin GhoS Antitoxin Detail
JSU10_RS21660 (4490708) 4490708..4490980 - 273 WP_000405647.1 GNAT family N-acetyltransferase -
JSU10_RS21665 (4491193) 4491193..4495122 - 3930 WP_046201569.1 Serine protease EspC VF
JSU10_RS21670 (4496283) 4496283..4497113 - 831 WP_001088100.1 AraC family transcriptional regulator -
JSU10_RS21675 (4498020) 4498020..4501856 - 3837 WP_001033999.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
JSU10_RS21680 (4502206) 4502206..4502739 + 534 WP_000733565.1 hypothetical protein VF
JSU10_RS21685 (4502808) 4502808..4505165 + 2358 WP_000695774.1 Outer membrane usher protein YraJ VF
JSU10_RS21690 (4505158) 4505158..4505859 + 702 WP_208235510.1 Chaperone protein FaeE VF
JSU10_RS21695 (4505879) 4505879..4506874 + 996 WP_001395679.1 hypothetical protein -
JSU10_RS21700 (4506966) 4506966..4507409 + 444 WP_000996600.1 hypothetical protein VF
JSU10_RS21705 (4507402) 4507402..4507920 + 519 WP_000565927.1 hypothetical protein -
JSU10_RS25480 (4508000) 4508000..4508728 + 729 Protein_4304 helix-turn-helix domain-containing protein -
JSU10_RS21720 (4508858) 4508858..4510921 - 2064 WP_230986327.1 peptidase domain-containing ABC transporter -
JSU10_RS21725 (4511013) 4511013..4512233 - 1221 WP_001150579.1 HlyD family efflux transporter periplasmic adaptor subunit -
JSU10_RS21730 (4512428) 4512428..4513540 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
JSU10_RS21735 (4513621) 4513621..4514193 - 573 WP_000661408.1 hypothetical protein -
JSU10_RS21740 (4514596) 4514596..4515347 + 752 Protein_4309 IS3 family transposase -
JSU10_RS21745 (4515476) 4515476..4517107 + 1632 WP_001216489.1 sensor histidine kinase -
JSU10_RS21750 (4517104) 4517104..4517823 + 720 WP_000611288.1 Transcriptional regulatory protein DcuR VF
JSU10_RS21755 (4518394) 4518394..4519734 + 1341 WP_000899522.1 anaerobic C4-dicarboxylate transporter DcuB -
JSU10_RS21760 (4519812) 4519812..4521458 + 1647 WP_000066681.1 class I fumarate hydratase -
JSU10_RS21765 (4521581) 4521581..4522210 + 630 WP_000198752.1 DUF2238 domain-containing protein -
JSU10_RS21770 (4522349) 4522349..4523770 - 1422 WP_000028114.1 melibiose:sodium transporter MelB -
JSU10_RS21775 (4523873) 4523873..4525228 - 1356 WP_000988016.1 alpha-galactosidase -
JSU10_RS21780 (4525511) 4525511..4526419 + 909 WP_001090758.1 transcriptional regulator MelR -
JSU10_RS21785 (4526618) 4526618..4528885 + 2268 WP_001307519.1 arginine decarboxylase -
JSU10_RS21790 (4529210) 4529210..4529971 + 762 WP_001217059.1 HTH-type transcriptional regulator GadX VF
JSU10_RS21795 (4530108) 4530108..4531445 + 1338 WP_000093154.1 arginine/agmatine antiporter -
JSU10_RS21800 (4531549) 4531549..4533192 + 1644 WP_001298860.1 Phosphoethanolamine transferase EptA VF
JSU10_RS21805 (4533189) 4533189..4533857 + 669 WP_000697915.1 Transcriptional regulatory protein BasR VF
JSU10_RS21810 (4533858) 4533858..4534958 + 1101 WP_001051093.1 two-component system sensor histidine kinase PmrB -
JSU10_RS21815 (4534934) 4534934..4535023 - 90 WP_000797656.1 LpxT activity modulator PmrR -
JSU10_RS21820 (4535135) 4535135..4536637 - 1503 WP_001296882.1 glycine betaine/L-proline transporter ProP -
JSU10_RS21825 (4536901) 4536901..4537779 - 879 WP_000169168.1 YjcZ-like family protein -
JSU10_RS21830 (4537776) 4537776..4540004 - 2229 WP_000288619.1 clamp-binding protein CrfC -
JSU10_RS21835 (4540406) 4540406..4540741 + 336 WP_001300891.1 zinc ribbon domain-containing protein YjdM -
JSU10_RS21840 (4540901) 4540901..4541344 + 444 WP_001131318.1 VOC family metalloprotein YjdN -
JSU10_RS21845 (4541477) 4541477..4542265 + 789 WP_001193391.1 Phosphate-import ATP-binding protein PhnC VF
JSU10_RS21850 (4542290) 4542290..4543306 + 1017 WP_000992002.1 phosphonate ABC transporter substrate-binding protein -
JSU10_RS21855 (4543368) 4543368..4544147 + 780 WP_001193498.1 phosphonate ABC transporter, permease protein PhnE -
JSU10_RS21860 (4544168) 4544168..4544893 + 726 WP_001295387.1 phosphonate metabolism transcriptional regulator PhnF -
JSU10_RS21865 (4544894) 4544894..4545346 + 453 WP_000542795.1 phosphonate C-P lyase system protein PhnG -
JSU10_RS21870 (4545343) 4545343..4545927 + 585 WP_000171608.1 phosphonate C-P lyase system protein PhnH -
JSU10_RS21875 (4545927) 4545927..4546991 + 1065 WP_001300601.1 alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI -
JSU10_RS21880 (4546984) 4546984..4547829 + 846 WP_000002284.1 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ -
JSU10_RS21885 (4547826) 4547826..4548584 + 759 WP_001039799.1 Putative phosphonates utilization ATP-binding protein PhnK VF
JSU10_RS21890 (4548695) 4548695..4549375 + 681 WP_000611428.1 phosphonate C-P lyase system protein PhnL -
JSU10_RS21895 (4549372) 4549372..4550508 + 1137 WP_000586302.1 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase -
JSU10_RS21900 (4550508) 4550508..4551065 + 558 WP_000971891.1 ribose 1,5-bisphosphokinase -
JSU10_RS21905 (4551052) 4551052..4551486 + 435 WP_001110490.1 aminoalkylphosphonate N-acetyltransferase -
JSU10_RS21910 (4551488) 4551488..4552246 + 759 WP_000059928.1 phosphonate metabolism protein PhnP -
JSU10_RS21915 (4552393) 4552393..4552722 - 330 WP_000819746.1 DDRRRQL repeat protein YjdP -
JSU10_RS21920 (4552791) 4552791..4553108 - 318 WP_001183287.1 RpiB/LacA/LacB family sugar-phosphate isomerase -
JSU10_RS21925 (4553361) 4553361..4555346 + 1986 WP_001307516.1 alkyl sulfatase YjcS -
JSU10_RS21930 (4555555) 4555555..4555830 + 276 WP_001297587.1 YtcA family lipoprotein -
JSU10_RS21935 (4555849) 4555849..4556880 + 1032 WP_000446383.1 Multidrug resistance protein MdtN VF
JSU10_RS21940 (4556880) 4556880..4558931 + 2052 WP_001275219.1 multidrug efflux transporter permease subunit MdtO -
JSU10_RS21945 (4558928) 4558928..4560426 + 1499 Protein_4350 multidrug efflux transporter outer membrane subunit MdtP -
JSU10_RS21950 (4560624) 4560624..4562771 + 2148 WP_001300547.1 formate dehydrogenase subunit alpha -
JSU10_RS21955 (4562865) 4562865..4563554 + 690 WP_000719886.1 Sel1 family TPR-like repeat protein YjcO -
JSU10_RS21960 (4563632) 4563632..4564945 - 1314 WP_000835799.1 glutamate/aspartate:proton symporter GltP -
JSU10_RS21965 (4565287) 4565287..4565883 - 597 WP_000662608.1 heme lyase NrfEFG subunit NrfG -
JSU10_RS21970 (4565880) 4565880..4566263 - 384 WP_001032546.1 heme lyase NrfEFG subunit NrfF -
JSU10_RS21975 (4566256) 4566256..4567974 - 1719 WP_071588992.1 Cytochrome c-type biogenesis protein CcmF VF
JSU10_RS21980 (4567994) 4567994..4568950 - 957 WP_000195171.1 cytochrome c nitrite reductase subunit NrfD -
JSU10_RS21985 (4568947) 4568947..4569618 - 672 WP_000220281.1 cytochrome c nitrite reductase Fe-S protein -
JSU10_RS21990 (4569615) 4569615..4570181 - 567 WP_001296647.1 cytochrome c nitrite reductase pentaheme subunit -
JSU10_RS21995 (4570226) 4570226..4571662 - 1437 WP_089631932.1 ammonia-forming nitrite reductase cytochrome c552 subunit -
JSU10_RS22000 (4572055) 4572055..4574013 + 1959 WP_000078239.1 acetate--CoA ligase -
JSU10_RS22005 (4574213) 4574213..4574527 + 315 WP_001014565.1 DUF485 domain-containing protein -
JSU10_RS22010 (4574524) 4574524..4576173 + 1650 WP_000832572.1 cation/acetate symporter ActP -
JSU10_RS22015 (4576351) 4576351..4577643 + 1293 WP_001270091.1 Secreted effector protein PipB2 VF
JSU10_RS22020 (4577797) 4577797..4579446 - 1650 WP_000402207.1 Na+/H+ antiporter -
JSU10_RS22025 (4579597) 4579597..4580946 - 1350 WP_000106879.1 guanine/hypoxanthine transporter GhxP -
JSU10_RS22030 (4581492) 4581492..4581956 - 465 WP_000412428.1 IS607 family transposase ISLhe9 Transposase
JSU10_RS22035 (4582042) 4582042..4582365 + 324 WP_000019358.1 Regulatory protein SoxS VF
JSU10_RS22040 (4582368) 4582368..4583954 - 1587 WP_000019536.1 putative cyclic di-GMP phosphodiesterase PdeC VF
JSU10_RS22045 (4584384) 4584384..4584665 + 282 WP_001295689.1 YjcB family protein -
JSU10_RS22050 (4584764) 4584764..4585300 - 537 WP_000168305.1 single-stranded DNA-binding protein SSB1 -
JSU10_RS22055 (4585554) 4585554..4588376 + 2823 WP_000357740.1 excinuclease ABC subunit UvrA -
JSU10_RS22060 (4588411) 4588411..4588767 - 357 WP_000155657.1 MmcQ/YjbR family DNA-binding protein -
JSU10_RS22065 (4588771) 4588771..4589187 - 417 WP_000270375.1 secondary thiamine-phosphate synthase enzyme YjbQ -
JSU10_RS22070 (4589298) 4589298..4590011 - 714 WP_001226928.1 acid phosphatase AphA -
JSU10_RS25485 (4590413) 4590413..4590635 + 223 Protein_4376 hypothetical protein -
JSU10_RS25490 (4590665) 4590665..4590916 + 252 WP_000275035.1 hypothetical protein -
JSU10_RS22080 (4591138) 4591138..4592331 - 1194 WP_000486979.1 aromatic amino acid transaminase -
JSU10_RS22085 (4592413) 4592413..4593417 - 1005 WP_024251353.1 AAA family ATPase -
JSU10_RS22090 (4593414) 4593414..4593971 - 558 WP_000122239.1 nicotinamide riboside transporter PnuC -
JSU10_RS22095 (4593994) 4593994..4595073 - 1080 WP_001147336.1 alanine racemase -
JSU10_RS22100 (4595126) 4595126..4596541 - 1416 WP_000918363.1 replicative DNA helicase -
JSU10_RS22105 (4596624) 4596624..4597607 + 984 WP_000235516.1 Quinone oxidoreductase 1 VF
JSU10_RS22110 (4597773) 4597773..4598015 - 243 WP_000891404.1 envelope stress response protein PspG -
JSU10_RS22115 (4598149) 4598149..4599186 - 1038 WP_001298868.1 tRNA dihydrouridine(20/20a) synthase DusA -
JSU10_RS22120 (4599550) 4599550..4600296 - 747 WP_274537728.1 DUF2713 family protein -
JSU10_RS25630 (4600287) 4600287..4600541 - 255 WP_024251354.1 protein YjbL -
JSU10_RS22125 (4600859) 4600859..4601374 + 516 WP_001295691.1 zinc uptake transcriptional repressor Zur -
JSU10_RS22130 (4601416) 4601416..4601625 - 210 WP_001030593.1 CsbD family protein -
JSU10_RS22135 (4601741) 4601741..4603066 - 1326 WP_001301116.1 MATE family efflux transporter DinF -
JSU10_RS22140 (4603139) 4603139..4603747 - 609 WP_000646078.1 transcriptional repressor LexA -
JSU10_RS22145 (4603857) 4603857..4604225 - 369 WP_000002907.1 diacylglycerol kinase -
JSU10_RS22150 (4604396) 4604396..4606819 + 2424 WP_001301502.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
JSU10_RS22155 (4606974) 4606974..4607846 - 873 WP_000455228.1 4-hydroxybenzoate octaprenyltransferase -
JSU10_RS22160 (4607859) 4607859..4608356 - 498 WP_001297295.1 chorismate lyase -
JSU10_RS22165 (4608579) 4608579..4610159 - 1581 Protein_4396 E3 ubiquitin-protein ligase SopA VF
JSU10_RS22170 (4610388) 4610388..4611308 - 921 WP_000783444.1 maltose operon protein MalM -
JSU10_RS22175 (4611551) 4611551..4612891 - 1341 WP_000973658.1 maltoporin LamB -
JSU10_RS22180 (4612963) 4612963..4614078 - 1116 WP_000179165.1 Maltose/maltodextrin import ATP-binding protein MalK VF
JSU10_RS22185 (4614443) 4614443..4615633 + 1191 WP_000695387.1 maltose/maltodextrin ABC transporter substrate-binding protein MalE -
JSU10_RS22190 (4615787) 4615787..4617331 + 1545 WP_001315948.1 maltose ABC transporter permease MalF -
JSU10_RS22195 (4617346) 4617346..4618236 + 891 WP_001252058.1 maltose ABC transporter permease MalG -
JSU10_RS22200 (4618608) 4618608..4620083 + 1476 WP_001097278.1 D-xylose transporter XylE -
JSU10_RS22205 (4620127) 4620127..4620537 - 411 WP_000202902.1 phosphate-starvation-inducible protein PsiE -
JSU10_RS22210 (4620663) 4620663..4620806 - 144 WP_000487770.1 hypothetical protein -
JSU10_RS22215 (4620807) 4620807..4621085 + 279 WP_001295279.1 periplasmic protein -
JSU10_RS22220 (4621132) 4621132..4623228 - 2097 WP_000745737.1 YjbH domain-containing protein -
JSU10_RS22225 (4623228) 4623228..4623965 - 738 WP_000595504.1 capsule biosynthesis GfcC family protein -
JSU10_RS22230 (4623962) 4623962..4624600 - 639 WP_001349959.1 YjbF family lipoprotein -
JSU10_RS22235 (4624714) 4624714..4624956 - 243 WP_000757333.1 exopolysaccharide production protein YjbE -
JSU10_RS22240 (4625311) 4625311..4626960 - 1650 WP_000790009.1 glucose-6-phosphate isomerase -
JSU10_RS22245 (4627485) 4627485..4628834 + 1350 WP_001290316.1 lysine-sensitive aspartokinase 3 -
JSU10_RS22250 (4628979) 4628979..4629905 + 927 WP_000212693.1 zeta toxin family protein -
JSU10_RS22255 (4629941) 4629941..4630732 - 792 WP_001130529.1 nucleotidyltransferase domain-containing protein -
JSU10_RS22260 (4630738) 4630738..4631865 - 1128 WP_000592033.1 slipin family protein -
JSU10_RS22265 (4632395) 4632395..4632667 + 273 WP_001207638.1 DUF3811 domain-containing protein -
JSU10_RS22270 (4632668) 4632668..4633540 - 873 WP_000936370.1 23S rRNA pseudouridine(2604) synthase RluF -
JSU10_RS22275 (4633752) 4633752..4634441 + 690 WP_000421763.1 dipeptidase PepE -
JSU10_RS22280 (4634532) 4634532..4636163 - 1632 WP_000956830.1 Na/Pi cotransporter family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance