MGE detailed information
MGE type: Genomic_island MGE length: 54895 bp
Accession: NZ_CP069646 Location: 2465892..2520786 Organism: Escherichia coli O7:H4 strain MIN14 Replicon: chromosome
Accession: NZ_CP069646 Location: 2465892..2520786 Organism: Escherichia coli O7:H4 strain MIN14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU15_RS12090 (2461481) | 2461481..2462980 | - | 1500 | WP_208231805.1 | phosphoethanolamine transferase | - |
| JSU15_RS12095 (2463162) | 2463162..2463806 | - | 645 | Protein_2401 | outer membrane beta-barrel protein | - |
| JSU15_RS12100 (2463909) | 2463909..2465081 | + | 1173 | WP_000952428.1 | IS21-like element ISEc62 family transposase | - |
| JSU15_RS12105 (2465081) | 2465081..2465875 | + | 795 | WP_000544809.1 | IS21-like element helper ATPase IstB | - |
| JSU15_RS12110 (2465928) | 2465928..2466032 | - | 105 | Protein_2404 | porin family protein | - |
| JSU15_RS12115 (2466994) | 2466994..2468250 | + | 1257 | WP_208231807.1 | ESPR domain-containing protein | - |
| JSU15_RS12120 (2468326) | 2468326..2469554 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| JSU15_RS12125 (2469647) | 2469647..2473147 | + | 3501 | WP_208231809.1 | Pertactin autotransporter | VF |
| JSU15_RS12130 (2473251) | 2473251..2473466 | + | 216 | WP_021536668.1 | hypothetical protein | - |
| JSU15_RS12135 (2473500) | 2473500..2474209 | + | 710 | Protein_2409 | conjugal transfer complement resistance protein TraT | - |
| JSU15_RS24785 (2474721) | 2474721..2474928 | + | 208 | Protein_2410 | IS66 family insertion sequence element accessory protein TnpB | - |
| JSU15_RS24790 (2474924) | 2474924..2475341 | + | 418 | Protein_2411 | IS66 family transposase | - |
| JSU15_RS12145 (2475417) | 2475417..2475692 | - | 276 | WP_021536665.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JSU15_RS24795 (2476436) | 2476436..2476884 | - | 449 | Protein_2413 | transposase | - |
| JSU15_RS12150 (2476952) | 2476952..2478118 | + | 1167 | Protein_2414 | IS3 family transposase ISLad1 | Transposase |
| JSU15_RS12155 (2478910) | 2478910..2479161 | + | 252 | WP_152240596.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| JSU15_RS12160 (2479215) | 2479215..2479784 | + | 570 | WP_109866512.1 | Pap fimbrial major pilin protein | VF |
| JSU15_RS12165 (2479834) | 2479834..2480394 | + | 561 | WP_162534485.1 | hypothetical protein | - |
| JSU15_RS12170 (2480454) | 2480454..2482952 | + | 2499 | WP_109866510.1 | Outer membrane usher protein PapC | VF |
| JSU15_RS12175 (2482997) | 2482997..2483734 | + | 738 | WP_021532550.1 | Chaperone protein PapD | VF |
| JSU15_RS12180 (2483789) | 2483789..2484322 | + | 534 | WP_071781817.1 | fimbrial protein | - |
| JSU15_RS12185 (2484340) | 2484340..2485347 | + | 1008 | WP_142762200.1 | hypothetical protein | - |
| JSU15_RS12190 (2485363) | 2485363..2485980 | + | 618 | WP_021536663.1 | EAL domain-containing protein | - |
| JSU15_RS12195 (2486818) | 2486818..2487246 | - | 429 | WP_021532544.1 | hypothetical protein | - |
| JSU15_RS12200 (2487453) | 2487453..2487647 | - | 195 | WP_142762201.1 | hypothetical protein | - |
| JSU15_RS12205 (2490203) | 2490203..2491197 | + | 995 | Protein_2425 | IS21 family transposase | - |
| JSU15_RS12210 (2491194) | 2491194..2491976 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| JSU15_RS12215 (2492163) | 2492163..2492729 | - | 567 | WP_117254270.1 | inovirus-type Gp2 protein | - |
| JSU15_RS24800 (2492751) | 2492751..2492948 | - | 198 | WP_071961491.1 | inovirus-type Gp2 protein | - |
| JSU15_RS12220 (2493196) | 2493196..2493621 | - | 426 | WP_208231811.1 | putative zinc ribbon protein | - |
| JSU15_RS12225 (2493618) | 2493618..2494001 | - | 384 | WP_208231813.1 | putative zinc ribbon protein | - |
| JSU15_RS12230 (2494371) | 2494371..2494970 | - | 600 | WP_112045354.1 | inovirus-type Gp2 protein | - |
| JSU15_RS12235 (2496221) | 2496221..2497012 | + | 792 | WP_021536657.1 | hypothetical protein | - |
| JSU15_RS12240 (2497395) | 2497395..2497601 | + | 207 | WP_000856891.1 | AlpA family transcriptional regulator | - |
| JSU15_RS12245 (2497687) | 2497687..2498259 | + | 573 | WP_001559903.1 | hypothetical protein | - |
| JSU15_RS12250 (2498659) | 2498659..2499275 | + | 617 | Protein_2435 | IS1 family transposase | - |
| JSU15_RS12255 (2500430) | 2500430..2501449 | + | 1020 | WP_021536656.1 | hypothetical protein | - |
| JSU15_RS12260 (2501559) | 2501559..2502431 | + | 873 | WP_112045353.1 | GTPase family protein | - |
| JSU15_RS12265 (2502803) | 2502803..2505649 | + | 2847 | WP_208231815.1 | Ag43/Cah family autotransporter adhesin | - |
| JSU15_RS12270 (2505977) | 2505977..2506795 | + | 819 | WP_021536653.1 | DUF932 domain-containing protein | - |
| JSU15_RS12275 (2506887) | 2506887..2507372 | + | 486 | WP_001565139.1 | antirestriction protein | - |
| JSU15_RS12280 (2507388) | 2507388..2507864 | + | 477 | WP_001186725.1 | RadC family protein | - |
| JSU15_RS12285 (2507933) | 2507933..2508154 | + | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| JSU15_RS12290 (2508229) | 2508229..2508597 | + | 369 | WP_001565140.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JSU15_RS12295 (2508687) | 2508687..2509064 | + | 378 | WP_001565141.1 | TA system toxin CbtA family protein | Toxin Detail |
| JSU15_RS12300 (2509061) | 2509061..2509549 | + | 489 | WP_021536652.1 | DUF5983 family protein | - |
| JSU15_RS12305 (2509561) | 2509561..2509758 | + | 198 | WP_021536651.1 | DUF957 domain-containing protein | - |
| JSU15_RS12310 (2509843) | 2509843..2510685 | + | 843 | WP_021536650.1 | DUF4942 domain-containing protein | - |
| JSU15_RS12315 (2511435) | 2511435..2512973 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JSU15_RS12320 (2513339) | 2513339..2514673 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JSU15_RS12325 (2514753) | 2514753..2516900 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JSU15_RS12330 (2516959) | 2516959..2518416 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| JSU15_RS12335 (2518653) | 2518653..2520170 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| JSU15_RS12340 (2520289) | 2520289..2520462 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JSU15_RS12345 (2520490) | 2520490..2520786 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JSU15_RS12350 (2521013) | 2521013..2521285 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| JSU15_RS12355 (2521297) | 2521297..2521527 | - | 231 | WP_001070602.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JSU15_RS12360 (2521708) | 2521708..2523339 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JSU15_RS12365 (2523336) | 2523336..2524055 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|