MGE detailed information
MGE type: Genomic_island MGE length: 45375 bp
Accession: NZ_CP068830 Location: 4739379..4784753 Organism: Escherichia coli strain RIVM_C018707 Replicon: chromosome
Accession: NZ_CP068830 Location: 4739379..4784753 Organism: Escherichia coli strain RIVM_C018707 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN82_RS22915 () | 4734898..4736094 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN82_RS22920 () | 4736379..4736660 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN82_RS22925 () | 4736682..4737467 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN82_RS22930 () | 4737528..4739045 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN82_RS22935 () | 4739069..4739368 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN82_RS22940 () | 4739379..4739954 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN82_RS22945 () | 4740003..4742555 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN82_RS22950 () | 4742664..4743581 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN82_RS22955 () | 4743718..4744623 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN82_RS22960 () | 4745235..4745604 | + | 370 | Protein_4496 | reverse transcriptase/maturase | - |
| JNN82_RS22965 () | 4745604..4746197 | + | 594 | Protein_4497 | maturase | - |
| JNN82_RS22970 () | 4746780..4748009 | + | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN82_RS22975 () | 4748026..4749081 | + | 1056 | WP_000494233.1 | propanediol utilization response regulator transcription factor GrpQ | - |
| JNN82_RS22980 () | 4749210..4750361 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN82_RS22985 () | 4750406..4750951 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN82_RS22990 () | 4751308..4751653 | - | 346 | Protein_4502 | helix-turn-helix domain-containing protein | - |
| JNN82_RS22995 () | 4752085..4752782 | - | 698 | Protein_4503 | IS1 family transposase | - |
| JNN82_RS23000 () | 4752839..4753051 | - | 213 | Protein_4504 | TetR family transcriptional regulator | - |
| JNN82_RS23005 () | 4753172..4754329 | - | 1158 | Protein_4505 | efflux RND transporter permease subunit | - |
| JNN82_RS23010 () | 4754420..4754686 | + | 267 | Protein_4506 | transposase | - |
| JNN82_RS23015 () | 4754748..4754973 | - | 226 | Protein_4507 | hypothetical protein | - |
| JNN82_RS23020 () | 4754985..4755218 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| JNN82_RS23025 () | 4755287..4755862 | - | 576 | Protein_4509 | hypothetical protein | - |
| JNN82_RS23030 () | 4756109..4756675 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| JNN82_RS23035 () | 4757976..4759070 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN82_RS23040 () | 4759089..4760339 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN82_RS23045 () | 4760423..4761358 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN82_RS23050 () | 4761351..4762286 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN82_RS23055 () | 4762822..4763274 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN82_RS23060 () | 4763795..4764526 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| JNN82_RS23065 () | 4765979..4767202 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN82_RS23070 () | 4767303..4768187 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| JNN82_RS23075 () | 4768390..4769070 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| JNN82_RS23080 () | 4769221..4769898 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| JNN82_RS23085 () | 4769904..4770137 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| JNN82_RS23090 () | 4770227..4771045 | + | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| JNN82_RS23095 () | 4771071..4771211 | - | 141 | WP_000997937.1 | hypothetical protein | - |
| JNN82_RS23100 () | 4771311..4771790 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| JNN82_RS23105 () | 4771805..4772281 | + | 477 | WP_001186193.1 | RadC family protein | - |
| JNN82_RS23110 () | 4772368..4772589 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| JNN82_RS23115 () | 4772669..4773037 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN82_RS23120 () | 4773126..4773503 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN82_RS23125 () | 4773500..4773697 | + | 198 | Protein_4529 | hypothetical protein | - |
| JNN82_RS23130 () | 4773725..4773922 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| JNN82_RS23135 () | 4774007..4774567 | + | 561 | Protein_4531 | DUF4942 domain-containing protein | - |
| JNN82_RS23140 () | 4775402..4776940 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN82_RS23145 () | 4777306..4778640 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN82_RS23150 () | 4778720..4780867 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN82_RS23155 () | 4780926..4782383 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN82_RS23160 () | 4782620..4784137 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN82_RS23165 () | 4784256..4784429 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN82_RS23170 () | 4784457..4784753 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN82_RS23175 () | 4784982..4785254 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN82_RS23180 () | 4785266..4785496 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN82_RS23185 () | 4785676..4787307 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN82_RS23190 () | 4787304..4788023 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|